Pioglitazone_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pioglitazone perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pioglitazone_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0775668
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0731402
SET SET nuclear proto-oncogene 0.0391533
INSIG1 insulin induced gene 1 0.0390951
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0388993
TPT1 tumor protein, translationally-controlled 1 0.0381998
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0379007
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0374169
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0373771
ERRFI1 ERBB receptor feedback inhibitor 1 0.0362891
MKI67 marker of proliferation Ki-67 0.0358491
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0341567
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0335115
SRP54 signal recognition particle 54kDa 0.0332549
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0331588
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0324988
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0323101
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0317674
RPL12 ribosomal protein L12 0.0311667
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0307257
PDGFA platelet-derived growth factor alpha polypeptide 0.0305405
DGKD diacylglycerol kinase, delta 130kDa 0.030179
ECT2 epithelial cell transforming 2 0.0298027
CKAP5 cytoskeleton associated protein 5 0.0290082
ZCCHC7 zinc finger, CCHC domain containing 7 0.0284896
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0275997
BIRC5 baculoviral IAP repeat containing 5 0.027016
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.0264291
IPO5 importin 5 0.0258726
COPG1 coatomer protein complex, subunit gamma 1 0.02551
CENPF centromere protein F, 350/400kDa 0.0253869
CEP250 centrosomal protein 250kDa 0.0252314
NUMA1 nuclear mitotic apparatus protein 1 0.0250604
STX18 syntaxin 18 0.0250017
EEF2 eukaryotic translation elongation factor 2 0.0248837
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0248356
SPAG9 sperm associated antigen 9 0.0240772
RPL23 ribosomal protein L23 0.0240543
HIPK3 homeodomain interacting protein kinase 3 0.0240252
NAP1L1 nucleosome assembly protein 1-like 1 0.023976
SEC23A Sec23 homolog A (S. cerevisiae) 0.0238583
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0237128
HMMR hyaluronan-mediated motility receptor (RHAMM) 0.0236088
TMEM248 transmembrane protein 248 0.0235737
HMGB2 high mobility group box 2 0.0233993
RSRP1 arginine/serine-rich protein 1 0.023328
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0230187
KNL1 kinetochore scaffold 1 0.0229772
RASA2 RAS p21 protein activator 2 0.0229646
RACGAP1 Rac GTPase activating protein 1 0.0223622
PHF3 PHD finger protein 3 0.0222038
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0217712
XPO6 exportin 6 0.0215379
MSN moesin 0.0214683
KIF23 kinesin family member 23 0.0213713
ETNK1 ethanolamine kinase 1 0.0211102
COQ10B coenzyme Q10 homolog B (S. cerevisiae) 0.0210729
SETD5 SET domain containing 5 0.0210373
PDE10A phosphodiesterase 10A 0.0207989
COPB1 coatomer protein complex, subunit beta 1 0.0207787
CDK5RAP2 CDK5 regulatory subunit associated protein 2 0.0207061
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0205857
SEC62 SEC62 homolog (S. cerevisiae) 0.0204367
KDM3A lysine (K)-specific demethylase 3A 0.0203766
CKAP2 cytoskeleton associated protein 2 0.0200479
BTN3A3 butyrophilin, subfamily 3, member A3 0.0198767
MMS22L MMS22-like, DNA repair protein 0.0198465
SDK1 sidekick cell adhesion molecule 1 0.0197326
MYO1D myosin ID 0.0196391
TPX2 TPX2, microtubule-associated 0.0196096
CRADD CASP2 and RIPK1 domain containing adaptor with death domain 0.0194916
ANXA1 annexin A1 0.0194564
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.0194541
SPAG5 sperm associated antigen 5 0.0194092
SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 0.0193454
HJURP Holliday junction recognition protein 0.0192031
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0191816
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0191791
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0191594
MRE11 MRE11 homolog, double strand break repair nuclease 0.0191557
CCNL1 cyclin L1 0.0191468
ZC3H13 zinc finger CCCH-type containing 13 0.0190889
CIB1 calcium and integrin binding 1 (calmyrin) 0.0190782
NUCB2 nucleobindin 2 0.0190372
TPM3 tropomyosin 3 0.0189225
PALS1 protein associated with LIN7 1, MAGUK p55 family member 0.0189081
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0188749
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog 0.018853
RPL19 ribosomal protein L19 0.0188446
ELOVL5 ELOVL fatty acid elongase 5 0.0187796
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0187665
FANCI Fanconi anemia, complementation group I 0.018718
CAPRIN1 cell cycle associated protein 1 0.0186489
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0186042
RCOR1 REST corepressor 1 0.0184853
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) 0.0184536
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0184519
PCBP3 poly(rC) binding protein 3 0.0184494
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0184084
SOCS5 suppressor of cytokine signaling 5 0.0183808

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.210076
FNDC3B fibronectin type III domain containing 3B -0.123458
TMSB10 thymosin beta 10 -0.104418
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0969742
IGFBP3 insulin-like growth factor binding protein 3 -0.0930714
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0929124
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0875583
DST dystonin -0.0814193
SMYD3 SET and MYND domain containing 3 -0.0735629
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0725654
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0668866
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0666892
FMN1 formin 1 -0.0642579
TRIO trio Rho guanine nucleotide exchange factor -0.061333
PRKCA protein kinase C, alpha -0.0603886
ZBTB20 zinc finger and BTB domain containing 20 -0.059887
HMGA2 high mobility group AT-hook 2 -0.0597819
IGF2 insulin-like growth factor 2 -0.0576304
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0528884
FMNL2 formin-like 2 -0.0522312
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0505769
DPYD dihydropyrimidine dehydrogenase -0.0499329
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0488698
ATG7 autophagy related 7 -0.0483451
FTH1 ferritin, heavy polypeptide 1 -0.0479019
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0474208
BIRC3 baculoviral IAP repeat containing 3 -0.0461582
AKAP13 A kinase (PRKA) anchor protein 13 -0.0443171
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 -0.0429457
TBC1D5 TBC1 domain family, member 5 -0.0418647
MYO9A myosin IXA -0.0412252
SCAPER S-phase cyclin A-associated protein in the ER -0.0411733
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0411138
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0408956
CD44 CD44 molecule (Indian blood group) -0.0408886
OSMR oncostatin M receptor -0.0405791
ERBIN erbb2 interacting protein -0.040439
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0402996
SAMD4A sterile alpha motif domain containing 4A -0.0402792
FLNB filamin B, beta -0.0397215
DSCAM Down syndrome cell adhesion molecule -0.039627
RIGI RNA sensor RIG-I -0.0396037
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0393988
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.038313
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0380406
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0379911
FAM3C family with sequence similarity 3, member C -0.0378684
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0376467
ZMYND8 zinc finger, MYND-type containing 8 -0.0376153
POTEF POTE ankyrin domain family, member F -0.0374027
PKM pyruvate kinase, muscle -0.0372386
PICALM phosphatidylinositol binding clathrin assembly protein -0.0366875
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0361639
PCNX4 pecanex 4 -0.0359349
ATM ATM serine/threonine kinase -0.0354302
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0352298
AKAP12 A kinase (PRKA) anchor protein 12 -0.0351566
TRIP12 thyroid hormone receptor interactor 12 -0.0346128
SVIL supervillin -0.034573
AHNAK AHNAK nucleoprotein -0.0345561
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0341615
PARD3 par-3 family cell polarity regulator -0.0338841
ANGPTL4 angiopoietin-like 4 -0.0337648
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0336761
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0329118
PIAS1 protein inhibitor of activated STAT, 1 -0.032841
VIM vimentin -0.0328262
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0327961
ATXN1 ataxin 1 -0.0319801
ATG10 autophagy related 10 -0.0319154
PRSS23 protease, serine, 23 -0.0318052
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0317568
NAV3 neuron navigator 3 -0.031658
FNIP1 folliculin interacting protein 1 -0.0315282
RAD51B RAD51 paralog B -0.0312551
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0310974
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0308581
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0303774
NCOA1 nuclear receptor coactivator 1 -0.0302898
TAOK1 TAO kinase 1 -0.0298541
NT5E 5'-nucleotidase, ecto (CD73) -0.0297652
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0296779
SQSTM1 sequestosome 1 -0.0296307
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0296002
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0295944
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0295669
UBC ubiquitin C -0.0294624
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0293951
PCED1B PC-esterase domain containing 1B -0.0291753
EFNA5 ephrin-A5 -0.0286702
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0286104
NALCN sodium leak channel, non selective -0.0282781
TAOK3 TAO kinase 3 -0.0280301
ZNF609 zinc finger protein 609 -0.0280253
PRR16 proline rich 16 -0.0279272
BABAM2 BRISC and BRCA1 A complex member 2 -0.0277371
CYTH1 cytohesin 1 -0.0276628
MAP2K5 mitogen-activated protein kinase kinase 5 -0.0275659
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0274969
STXBP1 syntaxin binding protein 1 -0.0274579