Plicamycin_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Plicamycin perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Plicamycin_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.168428
AKAP12 A kinase (PRKA) anchor protein 12 0.160283
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.121316
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.120004
PTMA prothymosin, alpha 0.117541
TRIO trio Rho guanine nucleotide exchange factor 0.11349
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.100147
SOD2 superoxide dismutase 2, mitochondrial 0.0780653
CANX calnexin 0.0729141
VIM vimentin 0.0684723
MYH9 myosin, heavy chain 9, non-muscle 0.0637988
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0626601
GOLGA4 golgin A4 0.0580527
PGK1 phosphoglycerate kinase 1 0.0557182
SQSTM1 sequestosome 1 0.0544664
NAV2 neuron navigator 2 0.0540756
DDIT4 DNA-damage-inducible transcript 4 0.0515211
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0491116
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0490473
CALR calreticulin 0.0483271
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0475048
MSN moesin 0.0472771
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0472473
TNIP1 TNFAIP3 interacting protein 1 0.0468549
POTEF POTE ankyrin domain family, member F 0.0466171
APP amyloid beta (A4) precursor protein 0.0461776
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0450193
TMSB4X thymosin beta 4, X-linked 0.0448771
SETD5 SET domain containing 5 0.0442518
CYLD cylindromatosis (turban tumor syndrome) 0.0434809
FNDC3B fibronectin type III domain containing 3B 0.0431948
ADAM17 ADAM metallopeptidase domain 17 0.042917
ATP13A3 ATPase type 13A3 0.042209
GARS1 glycyl-tRNA synthetase 1 0.0419267
MYOF myoferlin 0.0405057
CD109 CD109 molecule 0.0403868
RNMT RNA (guanine-7-) methyltransferase 0.0397741
ENO1 enolase 1, (alpha) 0.0392289
MATR3 matrin 3 0.0384524
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0380021
INSIG2 insulin induced gene 2 0.0379778
ZFP36L1 ZFP36 ring finger protein-like 1 0.0373772
SOX9 SRY (sex determining region Y)-box 9 0.0367396
ZNF292 zinc finger protein 292 0.036668
ZEB1 zinc finger E-box binding homeobox 1 0.0365127
HELZ helicase with zinc finger 0.036143
TPM3 tropomyosin 3 0.0359638
C1D C1D nuclear receptor corepressor 0.0354749
PCBP2 poly(rC) binding protein 2 0.0353553
PDIA6 protein disulfide isomerase family A, member 6 0.0349434
OGA O-GlcNAcase 0.0346605
NAP1L1 nucleosome assembly protein 1-like 1 0.0346329
XPO1 exportin 1 0.0335416
B2M beta-2-microglobulin 0.0335239
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0333084
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.03329
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0331055
SPAG9 sperm associated antigen 9 0.0325738
KMT2E lysine (K)-specific methyltransferase 2E 0.0325649
MXI1 MAX interactor 1, dimerization protein 0.0325521
ESYT2 extended synaptotagmin-like protein 2 0.0324541
HILPDA hypoxia inducible lipid droplet-associated 0.0321579
BHLHE40 basic helix-loop-helix family, member e40 0.0320477
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0317026
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0309991
KTN1 kinectin 1 (kinesin receptor) 0.0309164
UBA6 ubiquitin-like modifier activating enzyme 6 0.0307529
ERBIN erbb2 interacting protein 0.0301193
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0299074
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0295291
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0293983
LOXL2 lysyl oxidase-like 2 0.0293338
MSI2 musashi RNA-binding protein 2 0.0291352
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0291215
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0290127
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0288838
LDHA lactate dehydrogenase A 0.0286632
SUCO SUN domain containing ossification factor 0.0284215
NAMPT nicotinamide phosphoribosyltransferase 0.0282945
HMGB2 high mobility group box 2 0.0282069
VEGFA vascular endothelial growth factor A 0.0276879
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0275633
FLNB filamin B, beta 0.0275618
RNF24 ring finger protein 24 0.0273953
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.027326
FXR1 fragile X mental retardation, autosomal homolog 1 0.0272068
DTNA dystrobrevin, alpha 0.0265077
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0261687
ANO6 anoctamin 6 0.0261609
DLG1 discs, large homolog 1 (Drosophila) 0.0261487
HDAC9 histone deacetylase 9 0.0259703
AFF4 AF4/FMR2 family, member 4 0.0259482
FAM107B family with sequence similarity 107, member B 0.0259102
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0258893
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0258441
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0257947
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0257057
RAI1 retinoic acid induced 1 0.0255922
NGLY1 N-glycanase 1 0.0255877
COPA coatomer protein complex, subunit alpha 0.0255805

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.295895
MT2A metallothionein 2A -0.128428
IGFBP3 insulin-like growth factor binding protein 3 -0.117273
TMSB10 thymosin beta 10 -0.112042
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.106236
LOX lysyl oxidase -0.0758355
PLAT plasminogen activator, tissue -0.0700374
HLA-B major histocompatibility complex, class I, B -0.0659922
ANXA2 annexin A2 -0.061679
MAP1B microtubule-associated protein 1B -0.0611835
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0602268
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0578164
PODXL podocalyxin-like -0.057575
NAV1 neuron navigator 1 -0.055358
MT1X metallothionein 1X -0.0486336
RIGI RNA sensor RIG-I -0.0477396
CD44 CD44 molecule (Indian blood group) -0.0476976
CD99 CD99 molecule -0.0450524
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0441497
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.043291
GLIS3 GLIS family zinc finger 3 -0.0428467
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0423732
HLA-C major histocompatibility complex, class I, C -0.0403714
THBS2 thrombospondin 2 -0.0398913
CAVIN1 caveolae associated protein 1 -0.0378882
COL3A1 collagen, type III, alpha 1 -0.0365545
SAMD9 sterile alpha motif domain containing 9 -0.0363915
IFITM1 interferon induced transmembrane protein 1 -0.0357236
IFITM3 interferon induced transmembrane protein 3 -0.0327449
COL1A2 collagen, type I, alpha 2 -0.0313724
LMNA lamin A/C -0.0311522
SAMD9L sterile alpha motif domain containing 9-like -0.0303391
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0283753
MARCKS myristoylated alanine-rich protein kinase C substrate -0.02829
IFI6 interferon, alpha-inducible protein 6 -0.0282709
SP100 SP100 nuclear antigen -0.0280412
MX2 MX dynamin-like GTPase 2 -0.0273164
PRSS23 protease, serine, 23 -0.0268214
TPT1 tumor protein, translationally-controlled 1 -0.0265333
HDLBP high density lipoprotein binding protein -0.0263695
FTL ferritin, light polypeptide -0.0263694
IFIH1 interferon induced with helicase C domain 1 -0.0259121
CTSB cathepsin B -0.025574
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0253345
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 -0.0251621
MBD5 methyl-CpG binding domain protein 5 -0.0248556
S100A10 S100 calcium binding protein A10 -0.0245234
RPS15 ribosomal protein S15 -0.0241022
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0236477
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0234614
PLXNA2 plexin A2 -0.0228372
AUTS2 autism susceptibility candidate 2 -0.0228339
TXNIP thioredoxin interacting protein -0.022784
SLC38A1 solute carrier family 38, member 1 -0.022243
COL8A1 collagen, type VIII, alpha 1 -0.0221811
VDAC1 voltage-dependent anion channel 1 -0.0221143
RPL23 ribosomal protein L23 -0.0217332
ZBTB20 zinc finger and BTB domain containing 20 -0.0217182
LY6E lymphocyte antigen 6 complex, locus E -0.0216185
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.0215174
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0214372
LAMB1 laminin, beta 1 -0.0210788
RRBP1 ribosome binding protein 1 -0.0210272
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0209485
TMEM263 transmembrane protein 263 -0.0208071
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0207265
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0206658
DKK3 dickkopf WNT signaling pathway inhibitor 3 -0.020598
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0203397
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0202757
VCL vinculin -0.0201324
DGKG diacylglycerol kinase, gamma 90kDa -0.0200975
CDK12 cyclin-dependent kinase 12 -0.0200161
ABI3BP ABI family, member 3 (NESH) binding protein -0.0198417
FUS FUS RNA binding protein -0.0197785
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0197568
TUBB4B tubulin, beta 4B class IVb -0.0193531
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.0189451
EXT1 exostosin glycosyltransferase 1 -0.0187247
EGR1 early growth response 1 -0.0185838
CAPN2 calpain 2, (m/II) large subunit -0.0184954
ARL4C ADP-ribosylation factor-like 4C -0.0184224
RASAL2 RAS protein activator like 2 -0.0182424
RPL35A ribosomal protein L35a -0.0180386
GANAB glucosidase, alpha; neutral AB -0.0177864
COL5A1 collagen, type V, alpha 1 -0.0176567
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0175195
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0174693
TLE4 transducin-like enhancer of split 4 -0.0174089
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0173894
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0173371
ISG15 ISG15 ubiquitin-like modifier -0.0172417
IFI16 interferon, gamma-inducible protein 16 -0.0172143
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.016974
RTN4 reticulon 4 -0.0169723
THY1 Thy-1 cell surface antigen -0.0169113
NPR2 natriuretic peptide receptor 2 -0.016873
CYTH3 cytohesin 3 -0.0168395
KIAA1549L KIAA1549-like -0.0166645
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0166449