Plicamycin_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Plicamycin perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Plicamycin_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.128891
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0898906
VIM vimentin 0.0780001
FAM13A family with sequence similarity 13, member A 0.0733338
RPS6 ribosomal protein S6 0.0606763
RPL35A ribosomal protein L35a 0.0580454
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0497666
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0487501
B2M beta-2-microglobulin 0.0472211
RNF145 ring finger protein 145 0.0413034
HELZ helicase with zinc finger 0.0405079
RPL19 ribosomal protein L19 0.0387178
RPL36A ribosomal protein L36a 0.038342
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0381794
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0370765
KMT2C lysine (K)-specific methyltransferase 2C 0.0368381
EIF1 eukaryotic translation initiation factor 1 0.0367117
ENO1 enolase 1, (alpha) 0.0366718
RPS12 ribosomal protein S12 0.0366564
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0365724
TPT1 tumor protein, translationally-controlled 1 0.0360974
NDRG1 N-myc downstream regulated 1 0.0358955
RPLP0 ribosomal protein, large, P0 0.0341289
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0337409
GPBP1 GC-rich promoter binding protein 1 0.0332649
RPS8 ribosomal protein S8 0.033013
RPL26 ribosomal protein L26 0.0319584
SPAG9 sperm associated antigen 9 0.0318176
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0313494
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0306001
NPEPPS aminopeptidase puromycin sensitive 0.0305826
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0299085
DCAF7 DDB1 and CUL4 associated factor 7 0.029156
HMGB2 high mobility group box 2 0.0288124
RSRC2 arginine/serine-rich coiled-coil 2 0.0283833
RPS3 ribosomal protein S3 0.028123
NOP58 NOP58 ribonucleoprotein 0.0280051
RPL31 ribosomal protein L31 0.0277532
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.027516
RACK1 receptor for activated C kinase 1 0.0274133
RPLP1 ribosomal protein, large, P1 0.0268868
PGK1 phosphoglycerate kinase 1 0.0263622
NGLY1 N-glycanase 1 0.0259145
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0258464
RPL37A ribosomal protein L37a 0.0252107
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0251794
LOC102724023 ES1 protein homolog, mitochondrial 0.0250593
RPL7 ribosomal protein L7 0.02478
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0242962
WAC WW domain containing adaptor with coiled-coil 0.0241986
COG5 component of oligomeric golgi complex 5 0.0241268
RPS27A ribosomal protein S27a 0.0239451
SCAF11 SR-related CTD-associated factor 11 0.0239187
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0237986
ANKRD11 ankyrin repeat domain 11 0.0236723
AKAP13 A kinase (PRKA) anchor protein 13 0.0236127
ZNF292 zinc finger protein 292 0.0235117
TPR translocated promoter region, nuclear basket protein 0.0234311
S100A6 S100 calcium binding protein A6 0.0232593
ZFAND3 zinc finger, AN1-type domain 3 0.0232178
NIPBL Nipped-B homolog (Drosophila) 0.0231981
ANKHD1 ankyrin repeat and KH domain containing 1 0.0227172
FXR1 fragile X mental retardation, autosomal homolog 1 0.022648
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0225844
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0225665
ERRFI1 ERBB receptor feedback inhibitor 1 0.0225096
KDM3A lysine (K)-specific demethylase 3A 0.0223317
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0221505
RPS16 ribosomal protein S16 0.0220907
TMSB10 thymosin beta 10 0.0218144
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.021781
DTNA dystrobrevin, alpha 0.0217478
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0215671
NAP1L1 nucleosome assembly protein 1-like 1 0.0214063
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0213717
CHD1 chromodomain helicase DNA binding protein 1 0.0213155
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0212344
RBM25 RNA binding motif protein 25 0.021179
RPL37 ribosomal protein L37 0.0210708
PDIA6 protein disulfide isomerase family A, member 6 0.0208719
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0207712
WSB1 WD repeat and SOCS box containing 1 0.0207387
TRIM33 tripartite motif containing 33 0.0206459
CBX3 chromobox homolog 3 0.0203995
RPS11 ribosomal protein S11 0.0202587
STARD4 StAR-related lipid transfer (START) domain containing 4 0.020129
RPL7A ribosomal protein L7a 0.0201243
SKIC3 SKI3 subunit of superkiller complex 0.0201235
MYH9 myosin, heavy chain 9, non-muscle 0.0201044
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0198494
MACF1 microtubule-actin crosslinking factor 1 0.0197823
CSNK1G1 casein kinase 1, gamma 1 0.0195238
NUP58 nucleoporin 58 0.0194448
RPL18 ribosomal protein L18 0.0190916
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0189931
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0189016
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0188655
MT2A metallothionein 2A 0.0188132
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0187788
CDC27 cell division cycle 27 0.0187736

decreased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.14399
FMN1 formin 1 -0.116023
SYT1 synaptotagmin I -0.108133
MEIS2 Meis homeobox 2 -0.0860248
NRG1 neuregulin 1 -0.0841978
NALF1 NALCN channel auxiliary factor 1 -0.0761342
IGF2 insulin-like growth factor 2 -0.0751108
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0695874
CDH10 cadherin 10, type 2 (T2-cadherin) -0.06927
LSAMP limbic system-associated membrane protein -0.0677411
TRIB2 tribbles pseudokinase 2 -0.0653669
LPIN1 lipin 1 -0.0606674
PTPRD protein tyrosine phosphatase, receptor type, D -0.0580189
TRIO trio Rho guanine nucleotide exchange factor -0.0568694
KLHL13 kelch-like family member 13 -0.0538245
RNF213 ring finger protein 213 -0.0518713
NCAM2 neural cell adhesion molecule 2 -0.0511881
UNC5C unc-5 homolog C (C. elegans) -0.0488905
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0469801
FRMD4A FERM domain containing 4A -0.0464309
TLE4 transducin-like enhancer of split 4 -0.0410524
TPST1 tyrosylprotein sulfotransferase 1 -0.0407533
COL1A1 collagen, type I, alpha 1 -0.0392529
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0386807
DPH6 diphthamine biosynthesis 6 -0.0374299
PLPP1 phospholipid phosphatase 1 -0.034532
SMYD3 SET and MYND domain containing 3 -0.0340627
TAS2R14 taste receptor, type 2, member 14 -0.0337099
MAP1B microtubule-associated protein 1B -0.0335701
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0322482
ANGPT1 angiopoietin 1 -0.0320645
ZBTB20 zinc finger and BTB domain containing 20 -0.030441
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 -0.0297213
NREP neuronal regeneration related protein -0.0293728
IGF1R insulin-like growth factor 1 receptor -0.0291749
EEF2 eukaryotic translation elongation factor 2 -0.0291193
ARID5B AT rich interactive domain 5B (MRF1-like) -0.028906
CEMIP2 cell migration inducing hyaluronidase 2 -0.0285681
PTPRE protein tyrosine phosphatase, receptor type, E -0.0281804
RPTOR regulatory associated protein of MTOR, complex 1 -0.0277147
VCL vinculin -0.0276853
GLI3 GLI family zinc finger 3 -0.0271943
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0271855
FNDC3A fibronectin type III domain containing 3A -0.0271074
DNAH14 dynein, axonemal, heavy chain 14 -0.0270864
COL3A1 collagen, type III, alpha 1 -0.026634
ADGRB3 adhesion G protein-coupled receptor B3 -0.0262601
PTPRK protein tyrosine phosphatase, receptor type, K -0.0257294
TBC1D5 TBC1 domain family, member 5 -0.0255641
RBMS1 RNA binding motif, single stranded interacting protein 1 -0.024289
CD46 CD46 molecule, complement regulatory protein -0.0242279
STAT1 signal transducer and activator of transcription 1, 91kDa -0.024175
ZNF804A zinc finger protein 804A -0.0236833
PRSS12 protease, serine, 12 (neurotrypsin, motopsin) -0.0235742
TULP4 tubby like protein 4 -0.0234749
PCBP2 poly(rC) binding protein 2 -0.0234026
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) -0.0231334
SEPTIN9 septin 9 -0.0231
NRP1 neuropilin 1 -0.0228236
CSNK1D casein kinase 1, delta -0.0226995
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.022449
SIK2 salt-inducible kinase 2 -0.0223694
AOPEP aminopeptidase O (putative) -0.0220551
COL18A1 collagen, type XVIII, alpha 1 -0.0219202
GPC5 glypican 5 -0.0218554
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 -0.0216957
NPAS2 neuronal PAS domain protein 2 -0.0216676
TRPS1 trichorhinophalangeal syndrome I -0.0215924
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0214816
MBD5 methyl-CpG binding domain protein 5 -0.0213777
RALYL RALY RNA binding protein-like -0.0212161
EPHA3 EPH receptor A3 -0.0211709
THSD4 thrombospondin, type I, domain containing 4 -0.0211048
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0209349
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0208951
MSI2 musashi RNA-binding protein 2 -0.0207059
PCNX4 pecanex 4 -0.0205362
NCOR2 nuclear receptor corepressor 2 -0.0204178
GLG1 golgi glycoprotein 1 -0.0203079
TENM4 teneurin transmembrane protein 4 -0.0201979
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0200474
TENT5A terminal nucleotidyltransferase 5A -0.0200283
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0199381
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) -0.0198924
SF3B3 splicing factor 3b, subunit 3, 130kDa -0.0198902
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.0198743
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0196845
LRP1B low density lipoprotein receptor-related protein 1B -0.019682
SOS1 son of sevenless homolog 1 (Drosophila) -0.0196394
PTEN phosphatase and tensin homolog -0.019609
DUSP10 dual specificity phosphatase 10 -0.0196044
ADNP activity-dependent neuroprotector homeobox -0.019478
ZNF652 zinc finger protein 652 -0.0194392
DLC1 DLC1 Rho GTPase activating protein -0.019148
HAS2 hyaluronan synthase 2 -0.0190583
GLCCI1 glucocorticoid induced 1 -0.0190103
HAND2 heart and neural crest derivatives expressed 2 -0.0189054
RABGAP1L RAB GTPase activating protein 1-like -0.0186919
PSD3 pleckstrin and Sec7 domain containing 3 -0.0186397
COL6A1 collagen, type VI, alpha 1 -0.0184341