Plicamycin_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Plicamycin perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Plicamycin_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FGFR2 fibroblast growth factor receptor 2 0.154911
GMDS GDP-mannose 4,6-dehydratase 0.151505
LMO7 LIM domain 7 0.0799609
MAML2 mastermind-like 2 (Drosophila) 0.0577507
EHBP1 EH domain binding protein 1 0.052681
FRMD5 FERM domain containing 5 0.0465329
ARHGAP32 Rho GTPase activating protein 32 0.0449749
ANXA2 annexin A2 0.0444346
TNIK TRAF2 and NCK interacting kinase 0.0426358
MECOM MDS1 and EVI1 complex locus 0.0420098
PATJ PATJ crumbs cell polarity complex component 0.0415236
SIK3 SIK family kinase 3 0.0392209
ATF7IP2 activating transcription factor 7 interacting protein 2 0.0391415
PTK2 protein tyrosine kinase 2 0.0369552
EMP1 epithelial membrane protein 1 0.0368538
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0356558
KLF5 Kruppel-like factor 5 (intestinal) 0.035413
ZCCHC7 zinc finger, CCHC domain containing 7 0.0348823
POF1B premature ovarian failure, 1B 0.0340769
SHROOM3 shroom family member 3 0.033979
AOPEP aminopeptidase O (putative) 0.0338585
CDK6 cyclin-dependent kinase 6 0.0337186
SLK STE20-like kinase 0.0337112
MYO1D myosin ID 0.0331377
TCF12 transcription factor 12 0.0327111
RUNX1 runt-related transcription factor 1 0.0324584
CAPN8 calpain 8 0.0318961
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0316727
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.031606
LPP LIM domain containing preferred translocation partner in lipoma 0.0314563
ITGA6 integrin, alpha 6 0.0309924
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0297205
TMC5 transmembrane channel-like 5 0.0296131
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0294172
MCU mitochondrial calcium uniporter 0.0290735
GOLGB1 golgin B1 0.0289045
COBL cordon-bleu WH2 repeat protein 0.0284534
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.0283606
AHR aryl hydrocarbon receptor 0.0283305
SPATA13 spermatogenesis associated 13 0.0275803
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0274835
MED13 mediator complex subunit 13 0.0274295
ASPH aspartate beta-hydroxylase 0.0271205
EXOC4 exocyst complex component 4 0.0270839
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0269762
FAT1 FAT atypical cadherin 1 0.0261391
CMIP c-Maf inducing protein 0.0258947
SEPTIN9 septin 9 0.0257094
SPIDR scaffolding protein involved in DNA repair 0.0256575
MBNL1 muscleblind-like splicing regulator 1 0.0255283
RABGAP1L RAB GTPase activating protein 1-like 0.0254732
TAS2R14 taste receptor, type 2, member 14 0.0254619
H1-0 H1.0 linker histone 0.0249281
YAP1 Yes-associated protein 1 0.0248539
MTUS1 microtubule associated tumor suppressor 1 0.0248297
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.0248214
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) 0.0247718
KLHL29 kelch-like family member 29 0.0247371
PUM2 pumilio RNA-binding family member 2 0.0247246
MKI67 marker of proliferation Ki-67 0.0242394
PKP4 plakophilin 4 0.0240971
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0238758
ZFAND3 zinc finger, AN1-type domain 3 0.0237926
TXNRD1 thioredoxin reductase 1 0.0237717
PRKCA protein kinase C, alpha 0.023477
FAM135A family with sequence similarity 135, member A 0.0233162
SCAPER S-phase cyclin A-associated protein in the ER 0.0231701
MACF1 microtubule-actin crosslinking factor 1 0.0229629
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0228438
BIRC2 baculoviral IAP repeat containing 2 0.0226818
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 0.0226018
TRPS1 trichorhinophalangeal syndrome I 0.022536
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0223678
ATP11A ATPase, class VI, type 11A 0.0222576
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0221922
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0221908
NF1 neurofibromin 1 0.0221143
DENND1A DENN/MADD domain containing 1A 0.0219074
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0218914
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0217662
H1-4 H1.4 linker histone, cluster member 0.0217476
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0217326
MYO1E myosin IE 0.0212736
EXPH5 exophilin 5 0.0211799
GDA guanine deaminase 0.0211007
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0206348
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0203524
SH3RF1 SH3 domain containing ring finger 1 0.0203309
XYLT1 xylosyltransferase I 0.020317
ANLN anillin, actin binding protein 0.0203126
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0201436
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.0196637
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0194739
TTC17 tetratricopeptide repeat domain 17 0.0193653
PTPRK protein tyrosine phosphatase, receptor type, K 0.0193104
DLG1 discs, large homolog 1 (Drosophila) 0.0192938
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0192129
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0191331
EPB41L1 erythrocyte membrane protein band 4.1-like 1 0.0190992
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0190627

decreased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.131161
TMSB10 thymosin beta 10 -0.128313
PTMA prothymosin, alpha -0.122919
PCBP2 poly(rC) binding protein 2 -0.102604
FTL ferritin, light polypeptide -0.0982127
S100A6 S100 calcium binding protein A6 -0.097037
PGK1 phosphoglycerate kinase 1 -0.0965907
RPL23 ribosomal protein L23 -0.0955923
S100A10 S100 calcium binding protein A10 -0.0853936
POTEF POTE ankyrin domain family, member F -0.0811836
RPL35A ribosomal protein L35a -0.0808312
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0796325
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0779209
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0761953
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0734101
HMGA1 high mobility group AT-hook 1 -0.0708746
LYZ lysozyme -0.0699236
RPL19 ribosomal protein L19 -0.0664648
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.066302
CALR calreticulin -0.0649087
PDIA4 protein disulfide isomerase family A, member 4 -0.0633422
KRT18 keratin 18, type I -0.0605484
IFI27 interferon, alpha-inducible protein 27 -0.0598471
KRT19 keratin 19, type I -0.0596052
LOC112694756 uncharaterized LOC112694756 -0.0587017
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0582669
RPS6 ribosomal protein S6 -0.0577218
HLA-A major histocompatibility complex, class I, A -0.0550263
NDRG1 N-myc downstream regulated 1 -0.0544571
S100P S100 calcium binding protein P -0.0542066
HYOU1 hypoxia up-regulated 1 -0.0520907
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.052082
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.0517387
B2M beta-2-microglobulin -0.0514808
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0509824
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0492434
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0487679
GARS1 glycyl-tRNA synthetase 1 -0.0474204
RPS19 ribosomal protein S19 -0.0470354
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0469529
GSTP1 glutathione S-transferase pi 1 -0.0467293
TPT1 tumor protein, translationally-controlled 1 -0.0464845
RPLP1 ribosomal protein, large, P1 -0.0464176
ATF5 activating transcription factor 5 -0.0446937
RPS3 ribosomal protein S3 -0.044678
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0440588
CLDN7 claudin 7 -0.0434752
RPS12 ribosomal protein S12 -0.0431497
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0423028
EIF1 eukaryotic translation initiation factor 1 -0.0415795
AHNAK AHNAK nucleoprotein -0.0412666
ENO1 enolase 1, (alpha) -0.0405541
PKM pyruvate kinase, muscle -0.0403715
MUC17 mucin 17, cell surface associated -0.0401539
P4HB prolyl 4-hydroxylase, beta polypeptide -0.039899
PERP PERP, TP53 apoptosis effector -0.0387752
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0383974
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.038319
ARCN1 archain 1 -0.0381465
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0365299
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0351169
PDIA6 protein disulfide isomerase family A, member 6 -0.0349058
RPS18 ribosomal protein S18 -0.0346698
SETD5 SET domain containing 5 -0.0342613
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0342231
S100A9 S100 calcium binding protein A9 -0.0338949
ACBD3 acyl-CoA binding domain containing 3 -0.0338742
EZR ezrin -0.0334708
TMSB4X thymosin beta 4, X-linked -0.0332555
LIMA1 LIM domain and actin binding 1 -0.0331688
CBX3 chromobox homolog 3 -0.0328459
KLK10 kallikrein-related peptidase 10 -0.0326863
MUC1 mucin 1, cell surface associated -0.0326694
JUP junction plakoglobin -0.0322083
GNAS GNAS complex locus -0.0320296
CLDN4 claudin 4 -0.0320126
RPS25 ribosomal protein S25 -0.0315513
ACTG1 actin gamma 1 -0.0314394
UBC ubiquitin C -0.0312236
RPL18 ribosomal protein L18 -0.0312125
IFITM3 interferon induced transmembrane protein 3 -0.0306537
DSPP dentin sialophosphoprotein -0.0301876
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0299005
ITGB4 integrin, beta 4 -0.0296133
ESRP1 epithelial splicing regulatory protein 1 -0.0295934
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0295735
WIPF2 WAS/WASL interacting protein family, member 2 -0.0295542
PPP1R15A protein phosphatase 1, regulatory subunit 15A -0.0286699
PFN1 profilin 1 -0.0285671
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2 -0.028428
S100A11 S100 calcium binding protein A11 -0.0284149
CD9 CD9 molecule -0.0284139
GPX2 glutathione peroxidase 2 -0.0282564
RPL26 ribosomal protein L26 -0.0278976
TPI1 triosephosphate isomerase 1 -0.0276114
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) -0.0275423
LAPTM4A lysosomal protein transmembrane 4 alpha -0.0274648
SLC38A1 solute carrier family 38, member 1 -0.0273186
DEK DEK proto-oncogene -0.0272799
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0272598