Plicamycin_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Plicamycin perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Plicamycin_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.12951
NPSR1 neuropeptide S receptor 1 0.101779
PTMA prothymosin, alpha 0.0850087
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0805914
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0743544
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0721866
FAM13A family with sequence similarity 13, member A 0.0690858
NDRG1 N-myc downstream regulated 1 0.0617777
CD47 CD47 molecule 0.0603608
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0548979
PDIA3 protein disulfide isomerase family A, member 3 0.0503616
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0498649
PRELID2 PRELI domain containing 2 0.0461939
UBA6 ubiquitin-like modifier activating enzyme 6 0.0451788
ZNF292 zinc finger protein 292 0.0448153
ASPH aspartate beta-hydroxylase 0.0429444
ESYT2 extended synaptotagmin-like protein 2 0.0428944
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0424694
DSPP dentin sialophosphoprotein 0.0409594
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0404816
ALCAM activated leukocyte cell adhesion molecule 0.0386481
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0365903
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.0363296
GOLGA4 golgin A4 0.0359508
TPT1 tumor protein, translationally-controlled 1 0.03494
PUM2 pumilio RNA-binding family member 2 0.0348946
MXD1 MAX dimerization protein 1 0.034408
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0338254
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0334035
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.033114
FNDC3B fibronectin type III domain containing 3B 0.0319697
ATXN1 ataxin 1 0.0314762
SLC35F3 solute carrier family 35, member F3 0.0313015
ANLN anillin, actin binding protein 0.0312472
GREB1L growth regulation by estrogen in breast cancer-like 0.0310972
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0309312
H1-4 H1.4 linker histone, cluster member 0.0307098
GMDS GDP-mannose 4,6-dehydratase 0.0304705
MBNL2 muscleblind-like splicing regulator 2 0.030174
CCSER1 coiled-coil serine-rich protein 1 0.0300831
RPL7A ribosomal protein L7a 0.0300163
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0297986
FBXO11 F-box protein 11 0.0296556
TTC3 tetratricopeptide repeat domain 3 0.0295068
RNF217 ring finger protein 217 0.0294111
TRA2A transformer 2 alpha homolog (Drosophila) 0.02916
HELZ helicase with zinc finger 0.0290961
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0284166
ERRFI1 ERBB receptor feedback inhibitor 1 0.0282762
PTEN phosphatase and tensin homolog 0.028224
FNDC3A fibronectin type III domain containing 3A 0.0281921
GOLGB1 golgin B1 0.0281814
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0280275
SBF2 SET binding factor 2 0.0280174
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0278011
BBX bobby sox homolog (Drosophila) 0.0276275
TSC22D2 TSC22 domain family, member 2 0.0268894
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0268728
MON2 MON2 homolog (S. cerevisiae) 0.0268506
GRB10 growth factor receptor-bound protein 10 0.0262895
TMSB4X thymosin beta 4, X-linked 0.0261566
MAML3 mastermind-like 3 (Drosophila) 0.0261337
EPCAM epithelial cell adhesion molecule 0.0259218
DIAPH2 diaphanous-related formin 2 0.0258727
DENND1A DENN/MADD domain containing 1A 0.0257925
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0257825
ARFGEF3 ARFGEF family member 3 0.0257761
CENPF centromere protein F, 350/400kDa 0.0256472
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0256452
OSBPL8 oxysterol binding protein-like 8 0.025569
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0252999
VEGFA vascular endothelial growth factor A 0.0252052
DIAPH3 diaphanous-related formin 3 0.0251903
FNBP1L formin binding protein 1-like 0.0249191
ANKRD11 ankyrin repeat domain 11 0.0249184
ZCCHC7 zinc finger, CCHC domain containing 7 0.0248939
MIS18BP1 MIS18 binding protein 1 0.0248631
MKI67 marker of proliferation Ki-67 0.0247894
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0246367
MAML2 mastermind-like 2 (Drosophila) 0.0246005
RPL14 ribosomal protein L14 0.0242827
NAMPT nicotinamide phosphoribosyltransferase 0.0242052
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0241151
COPA coatomer protein complex, subunit alpha 0.0240668
KDM6A lysine (K)-specific demethylase 6A 0.0239935
ENO1 enolase 1, (alpha) 0.0239401
FNIP1 folliculin interacting protein 1 0.0238751
TRIO trio Rho guanine nucleotide exchange factor 0.0237886
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.023719
CLTC clathrin, heavy chain (Hc) 0.0236025
FOSL1 FOS-like antigen 1 0.0234648
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0232922
RAB1A RAB1A, member RAS oncogene family 0.0232083
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0231337
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0230349
MXI1 MAX interactor 1, dimerization protein 0.0228555
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0228403
MBNL1 muscleblind-like splicing regulator 1 0.0228124
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.0227832
VIM vimentin 0.0227671

decreased expression

Symbol Name Standardized Value
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.112188
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0998501
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0950915
EEF2 eukaryotic translation elongation factor 2 -0.0876819
LMO7 LIM domain 7 -0.0658535
HMGA1 high mobility group AT-hook 1 -0.0576415
PCBP2 poly(rC) binding protein 2 -0.0563082
PIGR polymeric immunoglobulin receptor -0.0558788
TMSB10 thymosin beta 10 -0.0553021
FTL ferritin, light polypeptide -0.0533136
PKM pyruvate kinase, muscle -0.0512965
ONECUT3 one cut homeobox 3 -0.04938
TNS4 tensin 4 -0.0491237
RPS18 ribosomal protein S18 -0.0485515
ARHGAP5 Rho GTPase activating protein 5 -0.0469618
LOC112694756 uncharaterized LOC112694756 -0.0454408
CD46 CD46 molecule, complement regulatory protein -0.0451277
KRT8 keratin 8, type II -0.0440321
SOX9 SRY (sex determining region Y)-box 9 -0.043423
FTH1 ferritin, heavy polypeptide 1 -0.0421033
AHNAK AHNAK nucleoprotein -0.0409667
KRT18 keratin 18, type I -0.0405697
RPL3 ribosomal protein L3 -0.0405133
RNF43 ring finger protein 43 -0.0388618
S100A6 S100 calcium binding protein A6 -0.0379091
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0359099
MYO1E myosin IE -0.0357533
GPA33 glycoprotein A33 (transmembrane) -0.0355948
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0351613
ABLIM1 actin binding LIM protein 1 -0.0343592
FAT1 FAT atypical cadherin 1 -0.0343002
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0333357
S100A14 S100 calcium binding protein A14 -0.0329294
RPL19 ribosomal protein L19 -0.0329016
ACTN4 actinin, alpha 4 -0.0327077
CCND1 cyclin D1 -0.0322572
PRSS3 protease, serine, 3 -0.0317175
YBX1 Y box binding protein 1 -0.030409
CDH17 cadherin 17, LI cadherin (liver-intestine) -0.0302842
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0300514
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0299891
OAZ1 ornithine decarboxylase antizyme 1 -0.0299255
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0291006
MUC2 mucin 2, oligomeric mucus/gel-forming -0.0284728
PLEC plectin -0.0283947
RPL12 ribosomal protein L12 -0.0271726
LOC102724023 ES1 protein homolog, mitochondrial -0.0270739
CD44 CD44 molecule (Indian blood group) -0.0267496
HDLBP high density lipoprotein binding protein -0.0266231
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0262767
UBE2H ubiquitin-conjugating enzyme E2H -0.0260381
CADPS Ca++-dependent secretion activator -0.0257176
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0255169
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0254322
TXNRD1 thioredoxin reductase 1 -0.0250204
SON SON DNA binding protein -0.0249644
EIF1 eukaryotic translation initiation factor 1 -0.0249144
SEPTIN9 septin 9 -0.0247739
RBM25 RNA binding motif protein 25 -0.0241329
RPS2 ribosomal protein S2 -0.0240673
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0239721
RAD21 RAD21 homolog (S. pombe) -0.0236325
GCLC glutamate-cysteine ligase, catalytic subunit -0.0235701
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0235412
SHB Src homology 2 domain containing adaptor protein B -0.0226691
DHFR dihydrofolate reductase -0.0226661
ZFP36 ZFP36 ring finger protein -0.0226214
RPL31 ribosomal protein L31 -0.0226102
LMNA lamin A/C -0.0224671
FHL2 four and a half LIM domains 2 -0.0223783
ATP5F1B ATP synthase F1 subunit beta -0.0222594
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0222548
CTBP2 C-terminal binding protein 2 -0.0218795
S100A10 S100 calcium binding protein A10 -0.021825
EHMT1 euchromatic histone-lysine N-methyltransferase 1 -0.0216624
TRIM2 tripartite motif containing 2 -0.0216216
MKNK2 MAP kinase interacting serine/threonine kinase 2 -0.0215589
PRRC2B proline-rich coiled-coil 2B -0.0214115
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0213857
IARS1 isoleucyl-tRNA synthetase 1 -0.0212806
RPL34 ribosomal protein L34 -0.0209554
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0207978
EGR1 early growth response 1 -0.0205575
POTEF POTE ankyrin domain family, member F -0.0202851
LDHA lactate dehydrogenase A -0.020249
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0199677
ARF1 ADP-ribosylation factor 1 -0.0199251
APP amyloid beta (A4) precursor protein -0.0198018
DGKD diacylglycerol kinase, delta 130kDa -0.0196718
RAB10 RAB10, member RAS oncogene family -0.0195241
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae) -0.0194312
TACC2 transforming, acidic coiled-coil containing protein 2 -0.0194111
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0189507
ABHD17C abhydrolase domain containing 17C -0.0189447
SAMD12 sterile alpha motif domain containing 12 -0.0186885
GNAS GNAS complex locus -0.0186815
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 -0.0185594
HDAC2 histone deacetylase 2 -0.0184245
POF1B premature ovarian failure, 1B -0.0183633
KRT19 keratin 19, type I -0.0183103