Plicamycin_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Plicamycin perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Plicamycin_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.255174
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.102827
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0994246
TMSB4X thymosin beta 4, X-linked 0.0878109
FMNL2 formin-like 2 0.0871649
CANX calnexin 0.0826848
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0789222
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0764579
KTN1 kinectin 1 (kinesin receptor) 0.0735529
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0689433
VIM vimentin 0.0675222
DST dystonin 0.0660587
SET SET nuclear proto-oncogene 0.0655271
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0597847
ENO1 enolase 1, (alpha) 0.0554734
EFNA5 ephrin-A5 0.053739
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.053623
MYOF myoferlin 0.0501886
RPS12 ribosomal protein S12 0.0499796
RAI1 retinoic acid induced 1 0.049485
PGK1 phosphoglycerate kinase 1 0.0490015
DLG1 discs, large homolog 1 (Drosophila) 0.0487065
EHBP1 EH domain binding protein 1 0.0478322
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0477396
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0470368
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0466592
PLK2 polo-like kinase 2 0.0464212
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0457437
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0447287
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0443717
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0436603
RAD51B RAD51 paralog B 0.0435029
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0428327
MBNL2 muscleblind-like splicing regulator 2 0.0423834
GOLGA4 golgin A4 0.0421735
SRSF11 serine/arginine-rich splicing factor 11 0.0409663
CDK19 cyclin-dependent kinase 19 0.0401176
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0390901
MYH9 myosin, heavy chain 9, non-muscle 0.0387512
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0382485
TPR translocated promoter region, nuclear basket protein 0.0382037
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.037983
TSC22D1 TSC22 domain family, member 1 0.037713
RPS6 ribosomal protein S6 0.0375346
TRIO trio Rho guanine nucleotide exchange factor 0.0373913
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0373298
CALR calreticulin 0.0372314
RPS3 ribosomal protein S3 0.0345258
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.034435
GARS1 glycyl-tRNA synthetase 1 0.0343146
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0339997
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0335282
DOCK11 dedicator of cytokinesis 11 0.0333901
ZDHHC14 zinc finger, DHHC-type containing 14 0.0331644
LPP LIM domain containing preferred translocation partner in lipoma 0.0324307
EPHA4 EPH receptor A4 0.0323225
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0322653
APP amyloid beta (A4) precursor protein 0.0321446
PCBP2 poly(rC) binding protein 2 0.0320901
MSN moesin 0.0319984
TTC3 tetratricopeptide repeat domain 3 0.0316495
ZCCHC7 zinc finger, CCHC domain containing 7 0.0315068
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0307414
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0306524
ESYT2 extended synaptotagmin-like protein 2 0.0305801
XPO1 exportin 1 0.0305291
PRRC2C proline-rich coiled-coil 2C 0.0304927
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0302295
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0298824
MACF1 microtubule-actin crosslinking factor 1 0.0298467
FNIP1 folliculin interacting protein 1 0.0295528
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0294667
PDIA6 protein disulfide isomerase family A, member 6 0.0292066
TMF1 TATA element modulatory factor 1 0.0289904
AKAP9 A kinase (PRKA) anchor protein 9 0.0287474
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0283896
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0282617
SETD5 SET domain containing 5 0.0275659
RBM25 RNA binding motif protein 25 0.0275527
RPL3 ribosomal protein L3 0.0273658
WASF2 WAS protein family, member 2 0.0272137
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0266891
SLK STE20-like kinase 0.0266327
HDGF hepatoma-derived growth factor 0.0262172
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0262073
TPM3 tropomyosin 3 0.0261986
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0261984
ANKRD11 ankyrin repeat domain 11 0.0261309
PTPRF protein tyrosine phosphatase, receptor type, F 0.0257154
PUM2 pumilio RNA-binding family member 2 0.0256063
ENO2 enolase 2 (gamma, neuronal) 0.0255703
FAM13B family with sequence similarity 13, member B 0.0253587
LARS1 leucyl-tRNA synthetase 1 0.02518
FXR1 fragile X mental retardation, autosomal homolog 1 0.0251008
CFAP299 cilia and flagella associated protein 299 0.0250643
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0250024
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0248926
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0247283
MOK MOK protein kinase 0.0247089
CAPRIN2 caprin family member 2 0.0246776

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.391259
TM4SF1 transmembrane 4 L six family member 1 -0.0937153
TXNRD1 thioredoxin reductase 1 -0.0767346
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0687823
MT2A metallothionein 2A -0.0684849
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0590556
EGR1 early growth response 1 -0.0546499
TMSB10 thymosin beta 10 -0.0541451
FTH1 ferritin, heavy polypeptide 1 -0.0468761
WARS1 tryptophanyl-tRNA synthetase 1 -0.0421025
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0394553
ACTG1 actin gamma 1 -0.0377255
LOC112694756 uncharaterized LOC112694756 -0.0374874
EMP1 epithelial membrane protein 1 -0.0368745
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0362161
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0355212
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0349668
AHNAK AHNAK nucleoprotein -0.0315858
SRGN serglycin -0.0315294
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0313735
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0305274
RPL35A ribosomal protein L35a -0.0299291
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0295142
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0290462
SPRY4 sprouty homolog 4 (Drosophila) -0.0287042
HLA-B major histocompatibility complex, class I, B -0.0281551
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0275801
MT1E metallothionein 1E -0.0270146
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0267136
FTL ferritin, light polypeptide -0.0265793
MT1X metallothionein 1X -0.0261774
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0253017
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0249581
TPT1 tumor protein, translationally-controlled 1 -0.0240681
RTN4 reticulon 4 -0.0239696
SDC4 syndecan 4 -0.0235544
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0227572
FUS FUS RNA binding protein -0.0224267
TP63 tumor protein p63 -0.0214598
RAB7A RAB7A, member RAS oncogene family -0.0213
OSMR oncostatin M receptor -0.0207463
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0206672
ARL5B ADP-ribosylation factor-like 5B -0.0200204
KLF6 Kruppel-like factor 6 -0.0197847
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 -0.0193619
HMGA1 high mobility group AT-hook 1 -0.0192473
CFLAR CASP8 and FADD-like apoptosis regulator -0.0192344
ARF1 ADP-ribosylation factor 1 -0.0191932
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0183336
RPL28 ribosomal protein L28 -0.0182776
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0180426
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0178755
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0177987
CUL1 cullin 1 -0.0177964
GCLM glutamate-cysteine ligase, modifier subunit -0.0177113
H1-0 H1.0 linker histone -0.0176432
ZBTB38 zinc finger and BTB domain containing 38 -0.0176079
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0175673
ZNF267 zinc finger protein 267 -0.0174804
TRIP12 thyroid hormone receptor interactor 12 -0.0173679
ZFX zinc finger protein, X-linked -0.0173297
MAPK8 mitogen-activated protein kinase 8 -0.0170833
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 -0.0170526
CAPN2 calpain 2, (m/II) large subunit -0.0170047
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0169421
ERCC1 excision repair cross-complementation group 1 -0.0168947
BIRC2 baculoviral IAP repeat containing 2 -0.0167247
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0166368
CKS2 CDC28 protein kinase regulatory subunit 2 -0.0165501
KDM3A lysine (K)-specific demethylase 3A -0.0164346
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0164212
ARHGAP5 Rho GTPase activating protein 5 -0.0163359
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0162767
RPL38 ribosomal protein L38 -0.0162691
HDLBP high density lipoprotein binding protein -0.0162254
ZNF217 zinc finger protein 217 -0.0162158
USP12 ubiquitin specific peptidase 12 -0.0162136
IFNGR2 interferon gamma receptor 2 (interferon gamma transducer 1) -0.0161886
IRF1 interferon regulatory factor 1 -0.0157466
JUN jun proto-oncogene -0.0156795
IFITM1 interferon induced transmembrane protein 1 -0.015595
FBXO11 F-box protein 11 -0.0153396
RPL6 ribosomal protein L6 -0.0152777
HBP1 HMG-box transcription factor 1 -0.0151626
HJURP Holliday junction recognition protein -0.0149689
RRBP1 ribosome binding protein 1 -0.0146594
PAIP2 poly(A) binding protein interacting protein 2 -0.0146268
HNRNPL heterogeneous nuclear ribonucleoprotein L -0.0145739
RNF168 ring finger protein 168, E3 ubiquitin protein ligase -0.014549
PSD3 pleckstrin and Sec7 domain containing 3 -0.0145228
NT5E 5'-nucleotidase, ecto (CD73) -0.0144626
IL6ST interleukin 6 signal transducer -0.0144334
ZSWIM6 zinc finger, SWIM-type containing 6 -0.01435
PLSCR1 phospholipid scramblase 1 -0.0143042
NPR2 natriuretic peptide receptor 2 -0.0142874
RIGI RNA sensor RIG-I -0.0140799
NAMPT nicotinamide phosphoribosyltransferase -0.0140501
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0139614
PRNP prion protein -0.0138953
PSMB7 proteasome (prosome, macropain) subunit, beta type, 7 -0.013532