Plicamycin_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Plicamycin perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Plicamycin_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor 0.0958877
FAM13A family with sequence similarity 13, member A 0.0366412
PTPRM protein tyrosine phosphatase, receptor type, M 0.0292479
ASPH aspartate beta-hydroxylase 0.0288909
MYH9 myosin, heavy chain 9, non-muscle 0.0277787
NGLY1 N-glycanase 1 0.0251623
CAMTA1 calmodulin binding transcription activator 1 0.0245374
FNIP1 folliculin interacting protein 1 0.0234387
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0233631
SOD2 superoxide dismutase 2, mitochondrial 0.0226999
FNDC3B fibronectin type III domain containing 3B 0.0222969
LAMC2 laminin, gamma 2 0.0216723
ANKRD10 ankyrin repeat domain 10 0.0213918
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0211477
ADAM17 ADAM metallopeptidase domain 17 0.0203593
UBA6 ubiquitin-like modifier activating enzyme 6 0.0199545
PCBP2 poly(rC) binding protein 2 0.0192956
DSPP dentin sialophosphoprotein 0.0186255
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0186216
AKAP13 A kinase (PRKA) anchor protein 13 0.0185746
SLTM SAFB-like, transcription modulator 0.0182729
LMO7 LIM domain 7 0.0177792
ARRDC3 arrestin domain containing 3 0.0176653
MSN moesin 0.0176279
GCLC glutamate-cysteine ligase, catalytic subunit 0.0173951
TOP1 topoisomerase (DNA) I 0.0173378
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0171345
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0171281
KMT2E lysine (K)-specific methyltransferase 2E 0.017055
PTMA prothymosin, alpha 0.0168203
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0167894
THSD4 thrombospondin, type I, domain containing 4 0.0166037
PTPRJ protein tyrosine phosphatase, receptor type, J 0.016261
TBC1D22A TBC1 domain family, member 22A 0.0161184
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0150682
ATP13A3 ATPase type 13A3 0.0147971
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0147518
PDE4D phosphodiesterase 4D, cAMP-specific 0.0144928
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0143766
PUM2 pumilio RNA-binding family member 2 0.0142586
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0140715
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0140577
RNF145 ring finger protein 145 0.0140297
MACF1 microtubule-actin crosslinking factor 1 0.0140061
GSK3B glycogen synthase kinase 3 beta 0.0138001
DOCK5 dedicator of cytokinesis 5 0.0136028
SLMAP sarcolemma associated protein 0.0133895
KTN1 kinectin 1 (kinesin receptor) 0.013357
UVRAG UV radiation resistance associated 0.0133361
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0133034
BIRC3 baculoviral IAP repeat containing 3 0.013165
GRB10 growth factor receptor-bound protein 10 0.0131478
RASA2 RAS p21 protein activator 2 0.0131019
PTEN phosphatase and tensin homolog 0.01309
GPC6 glypican 6 0.0130619
SRRM2 serine/arginine repetitive matrix 2 0.0130395
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0128198
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0126206
BIRC6 baculoviral IAP repeat containing 6 0.0124977
SQSTM1 sequestosome 1 0.0124638
SEPTIN2 septin 2 0.0124326
ITCH itchy E3 ubiquitin protein ligase 0.0124277
SPAG9 sperm associated antigen 9 0.0123891
KDM2A lysine (K)-specific demethylase 2A 0.0123839
KCMF1 potassium channel modulatory factor 1 0.0123617
USP9X ubiquitin specific peptidase 9, X-linked 0.0122522
CAB39 calcium binding protein 39 0.0121926
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0119746
GIGYF2 GRB10 interacting GYF protein 2 0.0119086
ADAM9 ADAM metallopeptidase domain 9 0.0116963
YEATS2 YEATS domain containing 2 0.0116815
ZNF292 zinc finger protein 292 0.0116488
TPD52 tumor protein D52 0.0115349
SMAD3 SMAD family member 3 0.0113492
RICTOR RPTOR independent companion of MTOR, complex 2 0.0113467
HELZ helicase with zinc finger 0.0113252
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0112047
ANKRD11 ankyrin repeat domain 11 0.0111826
PGK1 phosphoglycerate kinase 1 0.0111616
ANKRD12 ankyrin repeat domain 12 0.0111395
CTNND1 catenin (cadherin-associated protein), delta 1 0.011084
RBM26 RNA binding motif protein 26 0.0110502
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.011029
ANO6 anoctamin 6 0.0110273
MED13L mediator complex subunit 13-like 0.0110055
NCKAP1 NCK-associated protein 1 0.0109894
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0109726
USP34 ubiquitin specific peptidase 34 0.0109536
BRWD1 bromodomain and WD repeat domain containing 1 0.0109517
MATR3 matrin 3 0.0108178
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0107496
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0106193
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0105654
KDM6A lysine (K)-specific demethylase 6A 0.0105361
TNIP1 TNFAIP3 interacting protein 1 0.0104821
SPIRE1 spire-type actin nucleation factor 1 0.0104552
ZFC3H1 zinc finger, C3H1-type containing 0.010401
OGA O-GlcNAcase 0.0104009
KIAA1217 KIAA1217 0.0103015
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0101437

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.363742
MT2A metallothionein 2A -0.100555
TMSB10 thymosin beta 10 -0.0589644
TPT1 tumor protein, translationally-controlled 1 -0.0443934
FTL ferritin, light polypeptide -0.0424612
EGR1 early growth response 1 -0.0361763
RPLP1 ribosomal protein, large, P1 -0.0356876
RPL35A ribosomal protein L35a -0.0333506
SEC61G Sec61 gamma subunit -0.0325573
FTH1 ferritin, heavy polypeptide 1 -0.0292346
MT1X metallothionein 1X -0.0253759
S100A10 S100 calcium binding protein A10 -0.0230156
RPS24 ribosomal protein S24 -0.0224285
ACTG1 actin gamma 1 -0.0224129
IER3 immediate early response 3 -0.0219
PKM pyruvate kinase, muscle -0.0214889
RPS8 ribosomal protein S8 -0.0211863
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0202995
RPS25 ribosomal protein S25 -0.0197607
RPL34 ribosomal protein L34 -0.0194809
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0194077
LOC112694756 uncharaterized LOC112694756 -0.0184515
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0184474
H1-0 H1.0 linker histone -0.0168453
RPL8 ribosomal protein L8 -0.0166043
BLZF1 basic leucine zipper nuclear factor 1 -0.0165344
RPL31 ribosomal protein L31 -0.0159319
RPS29 ribosomal protein S29 -0.0158272
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0157987
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0156986
EMP1 epithelial membrane protein 1 -0.0155445
RPL12 ribosomal protein L12 -0.0153616
RPL19 ribosomal protein L19 -0.0152976
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0152013
EIF1 eukaryotic translation initiation factor 1 -0.0149659
C15ORF48 chromosome 15 open reading frame 48 -0.0147646
RPS23 ribosomal protein S23 -0.0147546
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0143861
RPS21 ribosomal protein S21 -0.0143056
RPS3 ribosomal protein S3 -0.0141336
TXNRD1 thioredoxin reductase 1 -0.0140744
CST3 cystatin C -0.0139569
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0137932
RPS19 ribosomal protein S19 -0.0136602
FUS FUS RNA binding protein -0.0132984
S100A9 S100 calcium binding protein A9 -0.0132024
HLA-B major histocompatibility complex, class I, B -0.0130629
SLC38A1 solute carrier family 38, member 1 -0.0130195
RPL23 ribosomal protein L23 -0.0129491
HDLBP high density lipoprotein binding protein -0.0128368
S100A11 S100 calcium binding protein A11 -0.0126015
MKNK2 MAP kinase interacting serine/threonine kinase 2 -0.0125412
GRAMD1B GRAM domain containing 1B -0.0125211
S100P S100 calcium binding protein P -0.0125025
NDRG1 N-myc downstream regulated 1 -0.0124462
RPL37A ribosomal protein L37a -0.0123658
VDAC1 voltage-dependent anion channel 1 -0.0119547
MORF4L2 mortality factor 4 like 2 -0.0117985
STC1 stanniocalcin 1 -0.0117947
SPDYA speedy/RINGO cell cycle regulator family member A -0.0117688
KDM3A lysine (K)-specific demethylase 3A -0.0117527
RPLP2 ribosomal protein, large, P2 -0.0115915
RACK1 receptor for activated C kinase 1 -0.0115625
LDHA lactate dehydrogenase A -0.0114262
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0114109
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.011391
NABP1 nucleic acid binding protein 1 -0.0113305
RPL11 ribosomal protein L11 -0.0112725
GUK1 guanylate kinase 1 -0.0110343
RPL30 ribosomal protein L30 -0.01097
BTG1 B-cell translocation gene 1, anti-proliferative -0.0108471
AREG amphiregulin -0.0108378
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0106678
RPS11 ribosomal protein S11 -0.0105204
CIB1 calcium and integrin binding 1 (calmyrin) -0.0105105
RPS13 ribosomal protein S13 -0.0104633
RPS15 ribosomal protein S15 -0.0103746
RPL38 ribosomal protein L38 -0.0102541
INTS6 integrator complex subunit 6 -0.0102445
GM2A GM2 ganglioside activator -0.0101924
SLC38A2 solute carrier family 38, member 2 -0.0100846
RPL28 ribosomal protein L28 -0.00977381
PNRC1 proline-rich nuclear receptor coactivator 1 -0.00968582
RPS14 ribosomal protein S14 -0.00964385
RPL36 ribosomal protein L36 -0.00957739
ARF1 ADP-ribosylation factor 1 -0.00956563
ATF4 activating transcription factor 4 -0.00952192
RPS16 ribosomal protein S16 -0.00946822
RPS6 ribosomal protein S6 -0.00938719
CSTB cystatin B (stefin B) -0.00902917
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.00894269
TPI1 triosephosphate isomerase 1 -0.00892132
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.00877058
AGR2 anterior gradient 2 -0.00871366
RPS27 ribosomal protein S27 -0.00868045
RPL32 ribosomal protein L32 -0.00863824
HMGA1 high mobility group AT-hook 1 -0.00862152
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.00825317
RPLP0 ribosomal protein, large, P0 -0.00820111
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.00805796