Plicamycin_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Plicamycin perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Plicamycin_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.0940794
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0919034
MSN moesin 0.0661788
MYH9 myosin, heavy chain 9, non-muscle 0.0640287
TMSB4X thymosin beta 4, X-linked 0.0610464
VEGFA vascular endothelial growth factor A 0.0543642
GRB10 growth factor receptor-bound protein 10 0.0454634
RPS12 ribosomal protein S12 0.043171
PGK1 phosphoglycerate kinase 1 0.0401221
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0375257
RPLP0 ribosomal protein, large, P0 0.0363374
PCBP2 poly(rC) binding protein 2 0.0359225
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0348532
RNF145 ring finger protein 145 0.0342037
DSPP dentin sialophosphoprotein 0.0319608
RPL3 ribosomal protein L3 0.0308623
RPS18 ribosomal protein S18 0.0306465
FAM13A family with sequence similarity 13, member A 0.0283363
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0268316
TPM3 tropomyosin 3 0.0254658
HMGN2 high mobility group nucleosomal binding domain 2 0.0251873
KRT18 keratin 18, type I 0.0249773
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0249341
SQSTM1 sequestosome 1 0.0245687
RAI14 retinoic acid induced 14 0.0237848
TMF1 TATA element modulatory factor 1 0.0237235
RSRC2 arginine/serine-rich coiled-coil 2 0.0235121
ENO2 enolase 2 (gamma, neuronal) 0.0224337
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0219074
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0219053
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0200863
HMGA1 high mobility group AT-hook 1 0.0199971
FOSL1 FOS-like antigen 1 0.0193713
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0192742
GOLGA4 golgin A4 0.0190251
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0187592
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0185666
CBX3 chromobox homolog 3 0.0181326
PICALM phosphatidylinositol binding clathrin assembly protein 0.018121
SET SET nuclear proto-oncogene 0.0180768
HDGF hepatoma-derived growth factor 0.0178805
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0171923
AKAP12 A kinase (PRKA) anchor protein 12 0.0168037
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0165141
RPL7 ribosomal protein L7 0.0163018
CALR calreticulin 0.0161799
CTSA cathepsin A 0.0160883
PDLIM5 PDZ and LIM domain 5 0.0160453
CANX calnexin 0.0158016
CTBP2 C-terminal binding protein 2 0.0157288
MATR3 matrin 3 0.015588
CCNL1 cyclin L1 0.0154573
ISG15 ISG15 ubiquitin-like modifier 0.0154228
ADM adrenomedullin 0.01504
HILPDA hypoxia inducible lipid droplet-associated 0.0150341
BZW1 basic leucine zipper and W2 domains 1 0.0147505
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.014703
HMGB2 high mobility group box 2 0.0145775
EIF5 eukaryotic translation initiation factor 5 0.0145246
AHDC1 AT hook, DNA binding motif, containing 1 0.0144402
CCNG2 cyclin G2 0.0143744
F3 coagulation factor III (thromboplastin, tissue factor) 0.0142796
MIER1 mesoderm induction early response 1, transcriptional regulator 0.014184
GPBP1 GC-rich promoter binding protein 1 0.0140531
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0140245
UBA6 ubiquitin-like modifier activating enzyme 6 0.0137884
TOP1 topoisomerase (DNA) I 0.0137169
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0134526
DSTN destrin (actin depolymerizing factor) 0.0133405
HELZ helicase with zinc finger 0.0131257
CNN3 calponin 3, acidic 0.0130834
SOD2 superoxide dismutase 2, mitochondrial 0.0129798
RANBP1 RAN binding protein 1 0.0128577
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0124746
PDS5A PDS5 cohesin associated factor A 0.0124662
FDPS farnesyl diphosphate synthase 0.0124501
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0123814
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0123752
CD46 CD46 molecule, complement regulatory protein 0.0122483
COPB1 coatomer protein complex, subunit beta 1 0.0121777
SOX4 SRY (sex determining region Y)-box 4 0.0121758
UBE2B ubiquitin-conjugating enzyme E2B 0.0121328
ERRFI1 ERBB receptor feedback inhibitor 1 0.0120829
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0119934
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0118818
PSMA6 proteasome (prosome, macropain) subunit, alpha type, 6 0.0118502
MCL1 myeloid cell leukemia 1 0.0117951
GADD45A growth arrest and DNA-damage-inducible, alpha 0.0117808
RPS7 ribosomal protein S7 0.0117651
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0116865
NACA nascent polypeptide-associated complex alpha subunit 0.0116673
RPS17 ribosomal protein S17 0.0115055
GPX4 glutathione peroxidase 4 0.0114816
CCNY cyclin Y 0.0114521
RPL37A ribosomal protein L37a 0.0112807
NUP58 nucleoporin 58 0.011137
TSC22D2 TSC22 domain family, member 2 0.0110639
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.011041
PPP4R1 protein phosphatase 4, regulatory subunit 1 0.011033
ELP2 elongator acetyltransferase complex subunit 2 0.0109763

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.425562
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.231179
FN1 fibronectin 1 -0.22183
UBC ubiquitin C -0.207326
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.162415
ACTG1 actin gamma 1 -0.110314
TMSB10 thymosin beta 10 -0.100938
ASPH aspartate beta-hydroxylase -0.0877968
FTL ferritin, light polypeptide -0.0830239
TM4SF1 transmembrane 4 L six family member 1 -0.0698141
ANXA2 annexin A2 -0.0690566
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0661594
AHNAK AHNAK nucleoprotein -0.0659808
NDRG1 N-myc downstream regulated 1 -0.0648201
ELL2 elongation factor, RNA polymerase II, 2 -0.0583016
TPT1 tumor protein, translationally-controlled 1 -0.0572235
LMO7 LIM domain 7 -0.0567488
RPL23 ribosomal protein L23 -0.0524477
ALCAM activated leukocyte cell adhesion molecule -0.0503353
PTK2 protein tyrosine kinase 2 -0.0503112
CAPN2 calpain 2, (m/II) large subunit -0.0478308
RPL8 ribosomal protein L8 -0.0467275
RPS27A ribosomal protein S27a -0.0441837
SDC4 syndecan 4 -0.0433293
TMEM263 transmembrane protein 263 -0.0428261
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0419114
DSG2 desmoglein 2 -0.0416166
RPL34 ribosomal protein L34 -0.0415505
TXNRD1 thioredoxin reductase 1 -0.0412059
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0411661
RHOA ras homolog family member A -0.0405455
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.040024
KRT7 keratin 7, type II -0.0389471
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0382024
CTSB cathepsin B -0.0373337
ANKRD28 ankyrin repeat domain 28 -0.0372485
LAMC2 laminin, gamma 2 -0.0371161
CCNI cyclin I -0.0357043
ERBIN erbb2 interacting protein -0.0355809
CALU calumenin -0.0352702
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0347553
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0346535
EPCAM epithelial cell adhesion molecule -0.0345993
PARD3 par-3 family cell polarity regulator -0.0344282
RPL32 ribosomal protein L32 -0.0343256
EMP1 epithelial membrane protein 1 -0.0338821
CD44 CD44 molecule (Indian blood group) -0.0326299
DSCAM Down syndrome cell adhesion molecule -0.0324694
MAP4 microtubule-associated protein 4 -0.0322796
VGLL3 vestigial-like family member 3 -0.0322392
SGMS2 sphingomyelin synthase 2 -0.0320465
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0313447
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0311239
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0305418
ZFAND3 zinc finger, AN1-type domain 3 -0.0299143
BLZF1 basic leucine zipper nuclear factor 1 -0.029695
S100A10 S100 calcium binding protein A10 -0.029667
IFI27 interferon, alpha-inducible protein 27 -0.0294249
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0294068
TACSTD2 tumor-associated calcium signal transducer 2 -0.0293476
RYBP RING1 and YY1 binding protein -0.0288169
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0285902
P4HB prolyl 4-hydroxylase, beta polypeptide -0.028262
CD2AP CD2-associated protein -0.027911
TXNIP thioredoxin interacting protein -0.0278089
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0276071
NIPBL Nipped-B homolog (Drosophila) -0.027029
LAMB3 laminin, beta 3 -0.0269944
MARCHF6 membrane associated ring-CH-type finger 6 -0.0268383
RAB7A RAB7A, member RAS oncogene family -0.026768
MDK midkine (neurite growth-promoting factor 2) -0.0267524
OSMR oncostatin M receptor -0.0266532
ARF1 ADP-ribosylation factor 1 -0.0262904
FTH1 ferritin, heavy polypeptide 1 -0.0262844
KRT8 keratin 8, type II -0.0262619
F11R F11 receptor -0.025658
EXT1 exostosin glycosyltransferase 1 -0.0254045
LDHA lactate dehydrogenase A -0.0251068
MBNL1 muscleblind-like splicing regulator 1 -0.0249122
IL6ST interleukin 6 signal transducer -0.0249114
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0248814
JUN jun proto-oncogene -0.0245436
NAMPT nicotinamide phosphoribosyltransferase -0.0245405
ZFAND6 zinc finger, AN1-type domain 6 -0.024382
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0242748
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0238958
SKP1 S-phase kinase-associated protein 1 -0.0237928
EEF2 eukaryotic translation elongation factor 2 -0.0237467
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0236724
KLF6 Kruppel-like factor 6 -0.0234455
MEF2A myocyte enhancer factor 2A -0.0233979
ANTXR2 anthrax toxin receptor 2 -0.0233096
RPS15 ribosomal protein S15 -0.0232814
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.023157
TFG TRK-fused gene -0.0230913
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0230694
SEC31A SEC31 homolog A (S. cerevisiae) -0.0228993
SVIL supervillin -0.0228883
SLC38A1 solute carrier family 38, member 1 -0.0228305
FAM3C family with sequence similarity 3, member C -0.0228187