Plicamycin_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Plicamycin perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Plicamycin_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.141008
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.115395
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0895475
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0569064
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0537678
PTMA prothymosin, alpha 0.0508781
SET SET nuclear proto-oncogene 0.0453265
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0410647
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0392553
WDR43 WD repeat domain 43 0.0384934
MATR3 matrin 3 0.0380556
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0375911
TMSB4X thymosin beta 4, X-linked 0.0366188
TSC22D2 TSC22 domain family, member 2 0.0358653
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0338002
TRIO trio Rho guanine nucleotide exchange factor 0.0336432
HMGA2 high mobility group AT-hook 2 0.0320254
TPM3 tropomyosin 3 0.0311299
MSN moesin 0.0305822
FXR1 fragile X mental retardation, autosomal homolog 1 0.0299905
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0294046
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0288297
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0286286
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0270972
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0266886
HSPH1 heat shock 105kDa/110kDa protein 1 0.0261027
GLS2 glutaminase 2 (liver, mitochondrial) 0.0259127
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0250965
RBM25 RNA binding motif protein 25 0.0250164
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0249543
ZNF292 zinc finger protein 292 0.0248123
ANLN anillin, actin binding protein 0.0247345
STRN striatin, calmodulin binding protein 0.0246913
FERMT2 fermitin family member 2 0.0245211
BCLAF1 BCL2-associated transcription factor 1 0.0241296
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0240836
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 0.0239544
PABPN1 poly(A) binding protein, nuclear 1 0.023939
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0235949
ADAM9 ADAM metallopeptidase domain 9 0.0232253
GOLGA4 golgin A4 0.0231909
USP3 ubiquitin specific peptidase 3 0.022834
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0227944
NFIB nuclear factor I/B 0.0227503
DKC1 dyskeratosis congenita 1, dyskerin 0.0227289
EIF4A2 eukaryotic translation initiation factor 4A2 0.0224107
PAPOLA poly(A) polymerase alpha 0.0222743
WAC WW domain containing adaptor with coiled-coil 0.0221653
SIK3 SIK family kinase 3 0.0221135
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0220889
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0220451
TBC1D12 TBC1 domain family, member 12 0.0219857
DSTN destrin (actin depolymerizing factor) 0.021792
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0216877
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0215224
H1-4 H1.4 linker histone, cluster member 0.0214699
POTEF POTE ankyrin domain family, member F 0.0214489
CFL2 cofilin 2 (muscle) 0.0214063
NCKAP1 NCK-associated protein 1 0.021309
CDC73 cell division cycle 73 0.0212991
SERBP1 SERPINE1 mRNA binding protein 1 0.0211188
CCNL1 cyclin L1 0.0211169
IPO7 importin 7 0.0209823
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.020797
SRRM1 serine/arginine repetitive matrix 1 0.0207596
HEY1 hes-related family bHLH transcription factor with YRPW motif 1 0.0206087
OLA1 Obg-like ATPase 1 0.0204157
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0203229
MEMO1 mediator of cell motility 1 0.0202655
YBX3 Y box binding protein 3 0.0201919
TRA2B transformer 2 beta homolog (Drosophila) 0.0201913
RPL7 ribosomal protein L7 0.0201721
PAWR PRKC, apoptosis, WT1, regulator 0.0200376
UBE2B ubiquitin-conjugating enzyme E2B 0.0197534
MKI67 marker of proliferation Ki-67 0.0191032
TFG TRK-fused gene 0.0190657
NAP1L1 nucleosome assembly protein 1-like 1 0.0189338
PDE10A phosphodiesterase 10A 0.0188826
RPL3 ribosomal protein L3 0.0188139
RPL19 ribosomal protein L19 0.0187822
PA2G4 proliferation-associated 2G4, 38kDa 0.0187229
GLO1 glyoxalase I 0.0187006
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.0186758
ANXA1 annexin A1 0.0186577
PFN1 profilin 1 0.0185134
CCT4 chaperonin containing TCP1, subunit 4 (delta) 0.0184939
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0184744
USP6NL USP6 N-terminal like 0.0183331
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0181272
RABGGTB Rab geranylgeranyltransferase, beta subunit 0.0181091
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1 0.0180848
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0179541
OSBPL9 oxysterol binding protein-like 9 0.0178698
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.0176732
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0176003
PRRC2C proline-rich coiled-coil 2C 0.0175502
XPO1 exportin 1 0.0175296
RTN4 reticulon 4 0.0175189
SMAD4 SMAD family member 4 0.0173549
FEM1C fem-1 homolog c (C. elegans) 0.017321

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.16268
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.150737
CDH10 cadherin 10, type 2 (T2-cadherin) -0.140197
GPC3 glypican 3 -0.130799
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.128137
COL11A1 collagen, type XI, alpha 1 -0.121314
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.117413
CADM2 cell adhesion molecule 2 -0.116303
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.11205
PCLO piccolo presynaptic cytomatrix protein -0.111889
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.10425
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0951146
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0909231
NTM neurotrimin -0.0904653
ADGRV1 adhesion G protein-coupled receptor V1 -0.0849515
PHIP pleckstrin homology domain interacting protein -0.0827938
ANKRD33B ankyrin repeat domain 33B -0.0723042
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.071565
COL1A2 collagen, type I, alpha 2 -0.0707385
ADGRL2 adhesion G protein-coupled receptor L2 -0.0692188
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.067271
PCDH9 protocadherin 9 -0.066219
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.066133
PEG10 paternally expressed 10 -0.0648198
COL3A1 collagen, type III, alpha 1 -0.0639363
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0604955
RPS16 ribosomal protein S16 -0.0586826
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0571044
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0558935
MAP4 microtubule-associated protein 4 -0.0557412
CAMTA1 calmodulin binding transcription activator 1 -0.0545917
LRRC4C leucine rich repeat containing 4C -0.0543734
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0515465
KDM3A lysine (K)-specific demethylase 3A -0.0506743
RAD51B RAD51 paralog B -0.0488407
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0480872
LPIN2 lipin 2 -0.0470084
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0468144
STRN3 striatin, calmodulin binding protein 3 -0.0466329
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0465879
RPS8 ribosomal protein S8 -0.0457726
PLPP1 phospholipid phosphatase 1 -0.045569
CHD1 chromodomain helicase DNA binding protein 1 -0.0451347
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 -0.0446781
THOC2 THO complex 2 -0.0414028
MYO10 myosin X -0.0413795
TPT1 tumor protein, translationally-controlled 1 -0.0406379
SNX6 sorting nexin 6 -0.0403143
PRTG protogenin -0.0401853
CDH19 cadherin 19, type 2 -0.0394208
VIM vimentin -0.0393824
WSB1 WD repeat and SOCS box containing 1 -0.0393567
TAS2R14 taste receptor, type 2, member 14 -0.0391653
TMSB10 thymosin beta 10 -0.0389404
GSE1 Gse1 coiled-coil protein -0.0387118
KMT2C lysine (K)-specific methyltransferase 2C -0.0386553
RFPL4B ret finger protein-like 4B -0.0385989
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0385069
PRKD1 protein kinase D1 -0.0383716
GNAS GNAS complex locus -0.0383395
DOCK5 dedicator of cytokinesis 5 -0.0378558
AHNAK AHNAK nucleoprotein -0.0378482
ZNF385D zinc finger protein 385D -0.0363154
ADNP activity-dependent neuroprotector homeobox -0.0362469
FNDC3B fibronectin type III domain containing 3B -0.0357599
NCOR1 nuclear receptor corepressor 1 -0.0354581
TOX thymocyte selection-associated high mobility group box -0.0347275
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 -0.0342717
ANKRD12 ankyrin repeat domain 12 -0.0340178
NCOR2 nuclear receptor corepressor 2 -0.0337872
NEBL nebulette -0.0337452
NIPBL Nipped-B homolog (Drosophila) -0.0337405
TENM3 teneurin transmembrane protein 3 -0.0335966
MEIS2 Meis homeobox 2 -0.0335535
FNDC3A fibronectin type III domain containing 3A -0.0333483
PHF21A PHD finger protein 21A -0.0331291
LRRN3 leucine rich repeat neuronal 3 -0.0330098
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 -0.032671
SMYD3 SET and MYND domain containing 3 -0.0325823
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4 -0.0320313
SAMD4A sterile alpha motif domain containing 4A -0.0316401
ZC3H12B zinc finger CCCH-type containing 12B -0.0315552
HMCN1 hemicentin 1 -0.0313989
CSNK1A1 casein kinase 1, alpha 1 -0.031187
KCTD16 potassium channel tetramerization domain containing 16 -0.0311681
EMP1 epithelial membrane protein 1 -0.0310332
HDAC9 histone deacetylase 9 -0.0309901
RPL35A ribosomal protein L35a -0.030717
NXN nucleoredoxin -0.0305405
CSMD3 CUB and Sushi multiple domains 3 -0.030225
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0301487
TTC28 tetratricopeptide repeat domain 28 -0.0298654
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0295643
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0295624
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0291068
COLGALT2 collagen beta(1-O)galactosyltransferase 2 -0.0288888
MDK midkine (neurite growth-promoting factor 2) -0.0287762
TNRC6B trinucleotide repeat containing 6B -0.0287269
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0286973
NPAS3 neuronal PAS domain protein 3 -0.028262