Plicamycin_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Plicamycin perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Plicamycin_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.124744
PTMA prothymosin, alpha 0.102516
CXCL8 chemokine (C-X-C motif) ligand 8 0.102152
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0994483
CANX calnexin 0.0940538
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0864219
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0860999
FAM13A family with sequence similarity 13, member A 0.0712874
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0686907
RNF145 ring finger protein 145 0.0615458
GOLGA4 golgin A4 0.058746
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0575044
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0546113
SOD2 superoxide dismutase 2, mitochondrial 0.0524382
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0494221
HELZ helicase with zinc finger 0.0490755
NAP1L1 nucleosome assembly protein 1-like 1 0.0490678
PRRC2C proline-rich coiled-coil 2C 0.0462551
ZNF292 zinc finger protein 292 0.045538
PGK1 phosphoglycerate kinase 1 0.0438203
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0436308
NDRG1 N-myc downstream regulated 1 0.0416876
OGA O-GlcNAcase 0.0405295
RPS12 ribosomal protein S12 0.040364
HILPDA hypoxia inducible lipid droplet-associated 0.0398881
WAC WW domain containing adaptor with coiled-coil 0.0392277
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0391102
MT2A metallothionein 2A 0.0385406
CD109 CD109 molecule 0.038209
RAB18 RAB18, member RAS oncogene family 0.0380787
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0377629
MATR3 matrin 3 0.037455
SUCO SUN domain containing ossification factor 0.036574
PCBP2 poly(rC) binding protein 2 0.0363225
APP amyloid beta (A4) precursor protein 0.0355799
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.034367
EPS8 epidermal growth factor receptor pathway substrate 8 0.0342199
TFG TRK-fused gene 0.0331162
SEC23A Sec23 homolog A (S. cerevisiae) 0.032987
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0326722
CALR calreticulin 0.032563
BHLHE40 basic helix-loop-helix family, member e40 0.0323655
XPO1 exportin 1 0.0322075
FNDC3B fibronectin type III domain containing 3B 0.0319627
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0318824
UBA6 ubiquitin-like modifier activating enzyme 6 0.0317362
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0313115
KTN1 kinectin 1 (kinesin receptor) 0.0311409
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0307639
KDM3A lysine (K)-specific demethylase 3A 0.0304892
NUP58 nucleoporin 58 0.0301365
RAB8B RAB8B, member RAS oncogene family 0.0299435
INSIG2 insulin induced gene 2 0.0298048
BASP1 brain abundant, membrane attached signal protein 1 0.0297175
WDR45B WD repeat domain 45B 0.0294024
ETNK1 ethanolamine kinase 1 0.0290442
COPA coatomer protein complex, subunit alpha 0.0289403
DOCK5 dedicator of cytokinesis 5 0.02823
VIM vimentin 0.028019
RLF rearranged L-myc fusion 0.0279338
SPAG9 sperm associated antigen 9 0.0279288
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0278228
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.027735
NEK7 NIMA-related kinase 7 0.0277208
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0275586
PUM2 pumilio RNA-binding family member 2 0.0275309
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0274711
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0272308
MYH9 myosin, heavy chain 9, non-muscle 0.0271433
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0270601
TRA2A transformer 2 alpha homolog (Drosophila) 0.0268841
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.026784
DDIT4 DNA-damage-inducible transcript 4 0.0266962
RSRC2 arginine/serine-rich coiled-coil 2 0.0265174
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0261277
TRIO trio Rho guanine nucleotide exchange factor 0.0257973
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0255199
RBM39 RNA binding motif protein 39 0.0253217
PNISR PNN-interacting serine/arginine-rich protein 0.025214
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0250382
MARCHF6 membrane associated ring-CH-type finger 6 0.0250232
TENT2 terminal nucleotidyltransferase 2 0.0249157
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0248906
ADAM17 ADAM metallopeptidase domain 17 0.0248254
FMNL2 formin-like 2 0.024807
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0247801
PICALM phosphatidylinositol binding clathrin assembly protein 0.0245512
ACBD3 acyl-CoA binding domain containing 3 0.0244672
TTC3 tetratricopeptide repeat domain 3 0.0242103
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0239348
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0239124
KMT2E lysine (K)-specific methyltransferase 2E 0.0238104
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0237357
TNIP1 TNFAIP3 interacting protein 1 0.0237224
NOP58 NOP58 ribonucleoprotein 0.0236859
TPR translocated promoter region, nuclear basket protein 0.0235322
ESYT2 extended synaptotagmin-like protein 2 0.02348
ZNF638 zinc finger protein 638 0.023397
TPM3 tropomyosin 3 0.0233739
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0229835

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.277964
FN1 fibronectin 1 -0.261959
NRG1 neuregulin 1 -0.23934
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.195717
EXT1 exostosin glycosyltransferase 1 -0.11298
HMGA2 high mobility group AT-hook 2 -0.100961
IFI27 interferon, alpha-inducible protein 27 -0.0928391
ASPH aspartate beta-hydroxylase -0.083609
SYT1 synaptotagmin I -0.0756069
GLIS3 GLIS family zinc finger 3 -0.0673646
VCL vinculin -0.0663486
FTL ferritin, light polypeptide -0.0619041
NRP1 neuropilin 1 -0.0618138
NTN4 netrin 4 -0.0546153
LOC102724023 ES1 protein homolog, mitochondrial -0.0544892
TMEM156 transmembrane protein 156 -0.0522638
TMSB10 thymosin beta 10 -0.0521465
MAP1B microtubule-associated protein 1B -0.0518194
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0514893
HLA-B major histocompatibility complex, class I, B -0.0491105
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.04561
EGR1 early growth response 1 -0.0452285
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0449231
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0422302
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.039041
SOX4 SRY (sex determining region Y)-box 4 -0.0367706
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0364779
KLHL5 kelch-like family member 5 -0.0362812
AEBP2 AE binding protein 2 -0.0362005
AHRR aryl-hydrocarbon receptor repressor -0.0360293
ETV1 ets variant 1 -0.0356942
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0355787
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0354983
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0350978
LY6E lymphocyte antigen 6 complex, locus E -0.0350186
OSMR oncostatin M receptor -0.0346691
RAI14 retinoic acid induced 14 -0.0337792
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0333585
ITGA1 integrin, alpha 1 -0.0327008
DNAH5 dynein, axonemal, heavy chain 5 -0.0326249
PALLD palladin, cytoskeletal associated protein -0.0324725
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.032372
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.031996
RASAL2 RAS protein activator like 2 -0.0319703
IFI6 interferon, alpha-inducible protein 6 -0.0307075
LRMDA leucine rich melanocyte differentiation associated -0.0294253
LTBP1 latent transforming growth factor beta binding protein 1 -0.0293537
IFI16 interferon, gamma-inducible protein 16 -0.0290885
EFNA5 ephrin-A5 -0.0283725
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0282854
POTEF POTE ankyrin domain family, member F -0.028225
ACTG1 actin gamma 1 -0.0278739
LMNA lamin A/C -0.0274231
RANBP17 RAN binding protein 17 -0.0273625
RNF213 ring finger protein 213 -0.0267503
LIMCH1 LIM and calponin homology domains 1 -0.0266571
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0263393
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0261993
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0260911
MBD5 methyl-CpG binding domain protein 5 -0.0255353
SLC35F3 solute carrier family 35, member F3 -0.024934
PRH1 proline-rich protein HaeIII subfamily 1 -0.0248352
NXN nucleoredoxin -0.0247503
STC2 stanniocalcin 2 -0.0246367
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0244565
SOX5 SRY (sex determining region Y)-box 5 -0.0242556
MX2 MX dynamin-like GTPase 2 -0.0240084
FTH1 ferritin, heavy polypeptide 1 -0.0235736
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0234084
NCOA7 nuclear receptor coactivator 7 -0.0233492
TAS2R14 taste receptor, type 2, member 14 -0.023093
PDE4D phosphodiesterase 4D, cAMP-specific -0.0230215
BICD1 bicaudal D homolog 1 (Drosophila) -0.0228272
ZBTB20 zinc finger and BTB domain containing 20 -0.022743
SEPTIN9 septin 9 -0.0226849
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0224415
RABGAP1L RAB GTPase activating protein 1-like -0.0218969
TSC22D1 TSC22 domain family, member 1 -0.0217777
NBEA neurobeachin -0.0216561
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0216246
RAB31 RAB31, member RAS oncogene family -0.0215289
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.021362
IFI44L interferon-induced protein 44-like -0.0210857
SFRP1 secreted frizzled-related protein 1 -0.0210366
FOXP1 forkhead box P1 -0.0209672
FUS FUS RNA binding protein -0.0208089
PRKCA protein kinase C, alpha -0.0207209
GPATCH2L G patch domain containing 2-like -0.0206922
TNS3 tensin 3 -0.0206632
ITGB5 integrin, beta 5 -0.0206572
SLC38A2 solute carrier family 38, member 2 -0.0205316
TENM4 teneurin transmembrane protein 4 -0.0205216
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0202879
ATF6 activating transcription factor 6 -0.0202455
RIGI RNA sensor RIG-I -0.0201885
GLUL glutamate-ammonia ligase -0.0197731
DNAH14 dynein, axonemal, heavy chain 14 -0.0197647
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0197302
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0197133
TSHZ2 teashirt zinc finger homeobox 2 -0.0196522