Pomalidomide Gene Set

Dataset DeepCoverMOA Drug Mechanisms of Action
Category proteomics
Type drug perturbation
Description An aromatic amine that is thalidomide substituted at position 4 on the isoindole ring system by an amino group. Used for the treatment of multiple myeloma in patients who failed to respond to previous therapies. (Chemical Entities of Biological Interest Ontology, CHEBI_72690)
External Link https://pubchem.ncbi.nlm.nih.gov/compound/134780
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Genes

199 proteins with high or low expression in Pomalidomide relative to other proteins from the DeepCoverMOA Drug Mechanisms of Action dataset.

high expression

Symbol Name Standardized Value
KIAA0825 KIAA0825 1.2
CKM creatine kinase, muscle 0.99
RNF4 ring finger protein 4 0.86
LMBRD1 LMBR1 domain containing 1 0.82
ZNF263 zinc finger protein 263 0.73
ADCY10 adenylate cyclase 10 (soluble) 0.71
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 0.67
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.66
BCOR BCL6 corepressor 0.61
SPCS1 signal peptidase complex subunit 1 homolog (S. cerevisiae) 0.61
TPST2 tyrosylprotein sulfotransferase 2 0.58
WDR20 WD repeat domain 20 0.57
RGN regucalcin 0.56
TM7SF2 transmembrane 7 superfamily member 2 0.55
CTNND2 catenin (cadherin-associated protein), delta 2 0.48
LMOD1 leiomodin 1 (smooth muscle) 0.47
ZHX1 zinc fingers and homeoboxes 1 0.46
FAM8A1 family with sequence similarity 8, member A1 0.45
BTBD11 BTB (POZ) domain containing 11 0.42
NAP1L1 nucleosome assembly protein 1-like 1 0.41
NRIP1 nuclear receptor interacting protein 1 0.41
DNAJC22 DnaJ (Hsp40) homolog, subfamily C, member 22 0.4
ONECUT3 one cut homeobox 3 0.4
METTL22 methyltransferase like 22 0.4
PRR36 proline rich 36 0.39
C6ORF136 chromosome 6 open reading frame 136 0.38
TPM1 tropomyosin 1 (alpha) 0.38
THAP11 THAP domain containing 11 0.38
SEMA6B sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 0.37
TIGD5 tigger transposable element derived 5 0.37
TMEM160 transmembrane protein 160 0.36
MDM4 MDM4, p53 regulator 0.35
DOP1A DOP1 leucine zipper like protein A 0.35
ENC1 ectodermal-neural cortex 1 (with BTB domain) 0.34
CLN3 ceroid-lipofuscinosis, neuronal 3 0.34
XBP1 X-box binding protein 1 0.34
ZG16B zymogen granule protein 16B 0.33
NMNAT3 nicotinamide nucleotide adenylyltransferase 3 0.33
LPIN3 lipin 3 0.33
SPTBN5 spectrin, beta, non-erythrocytic 5 0.33
MSX1 msh homeobox 1 0.33
CCDC170 coiled-coil domain containing 170 0.32
ATXN2 ataxin 2 0.32
TMEM51 transmembrane protein 51 0.32
C8ORF76 chromosome 8 open reading frame 76 0.31
KLK6 kallikrein-related peptidase 6 0.3
ZNF799 zinc finger protein 799 0.3
SEPHS1 selenophosphate synthetase 1 0.29
TNFAIP1 tumor necrosis factor, alpha-induced protein 1 (endothelial) 0.29
CCDC77 coiled-coil domain containing 77 0.29
RPS21 ribosomal protein S21 0.29
MYH4 myosin, heavy chain 4, skeletal muscle 0.28
COA5 cytochrome c oxidase assembly factor 5 0.28
SET SET nuclear proto-oncogene 0.27
ZNF224 zinc finger protein 224 0.27
COMMD2 COMM domain containing 2 0.26
MED19 mediator complex subunit 19 0.26
TENT4B terminal nucleotidyltransferase 4B 0.26
RPL26 ribosomal protein L26 0.26
ARHGAP44 Rho GTPase activating protein 44 0.25
ZFP64 ZFP64 zinc finger protein 0.25
KCTD12 potassium channel tetramerization domain containing 12 0.25
MTFR2 mitochondrial fission regulator 2 0.25
METRN meteorin, glial cell differentiation regulator 0.25
TNS2 tensin 2 0.25
BAHCC1 BAH domain and coiled-coil containing 1 0.25
EVI5L ecotropic viral integration site 5-like 0.24
MRC2 mannose receptor, C type 2 0.24
ZDHHC3 zinc finger, DHHC-type containing 3 0.24
NFE2L1 nuclear factor, erythroid 2-like 1 0.24
HSPA12B heat shock 70kD protein 12B 0.24
FKBP1A FK506 binding protein 1A, 12kDa 0.24
BTBD7 BTB (POZ) domain containing 7 0.24
RXRA retinoid X receptor, alpha 0.24
EHF ets homologous factor 0.24
CA2 carbonic anhydrase II 0.24
MROH6 maestro heat-like repeat family member 6 0.24
IFFO1 intermediate filament family orphan 1 0.24
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 0.23
CDC20 cell division cycle 20 0.23
GMIP GEM interacting protein 0.23
HIKESHI heat shock protein nuclear import factor hikeshi 0.23
TMEM106C transmembrane protein 106C 0.23
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.23
SBNO2 strawberry notch homolog 2 (Drosophila) 0.23
CYBRD1 cytochrome b reductase 1 0.23
NES nestin 0.23
DONSON downstream neighbor of SON 0.23
ZNF286A zinc finger protein 286A 0.23
ASPHD2 aspartate beta-hydroxylase domain containing 2 0.23
GIN1 gypsy retrotransposon integrase 1 0.23
TMEM102 transmembrane protein 102 0.23
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 0.22
CCN3 cellular communication network factor 3 0.22
FAM171B family with sequence similarity 171, member B 0.22
HMGB2 high mobility group box 2 0.22
OTUD5 OTU deubiquitinase 5 0.22
COBL cordon-bleu WH2 repeat protein 0.22
BRCC3 BRCA1/BRCA2-containing complex, subunit 3 0.22
ARSK arylsulfatase family, member K 0.22

low expression

Symbol Name Standardized Value
ZNF692 zinc finger protein 692 -1.77
ZNF827 zinc finger protein 827 -1.64
ZFP91 ZFP91 zinc finger protein -1.55
DTWD1 DTW domain containing 1 -1.48
PIP prolactin-induced protein -1.43
RNF166 ring finger protein 166 -1.2
SACK1F scaffolding CK1 anchoring protein F -1.19
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1 -1.15
MIIP migration and invasion inhibitory protein -0.66
TK2 thymidine kinase 2, mitochondrial -0.57
RTN1 reticulon 1 -0.54
ARPIN actin-related protein 2/3 complex inhibitor -0.53
FN1 fibronectin 1 -0.52
MAP3K12 mitogen-activated protein kinase kinase kinase 12 -0.52
LMTK2 lemur tyrosine kinase 2 -0.52
OASL 2'-5'-oligoadenylate synthetase-like -0.5
MCRIP2 MAPK regulated corepressor interacting protein 2 -0.47
ZNF92 zinc finger protein 92 -0.46
GRHL1 grainyhead-like 1 (Drosophila) -0.45
NBPF20 neuroblastoma breakpoint family, member 20 -0.44
RAB28 RAB28, member RAS oncogene family -0.44
TICAM1 toll-like receptor adaptor molecule 1 -0.43
CELSR2 cadherin, EGF LAG seven-pass G-type receptor 2 -0.41
DAP death-associated protein -0.4
OAF OAF homolog (Drosophila) -0.4
COL14A1 collagen, type XIV, alpha 1 -0.4
C2CD3 C2 calcium-dependent domain containing 3 -0.4
KRT222 keratin 222, type II -0.4
C4BPA complement component 4 binding protein, alpha -0.39
RBX1 ring-box 1, E3 ubiquitin protein ligase -0.39
AMACR alpha-methylacyl-CoA racemase -0.39
SMAD1 SMAD family member 1 -0.39
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 -0.39
ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 -0.39
C1ORF43 chromosome 1 open reading frame 43 -0.38
CCSER2 coiled-coil serine-rich protein 2 -0.38
FGFR1 fibroblast growth factor receptor 1 -0.38
IER5 immediate early response 5 -0.38
BRK1 BRICK1, SCAR/WAVE actin-nucleating complex subunit -0.37
PREX1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 -0.36
TMEM189 transmembrane protein 189 -0.35
USP45 ubiquitin specific peptidase 45 -0.35
IRX4 iroquois homeobox 4 -0.35
GLI4 GLI family zinc finger 4 -0.35
MIS12 MIS12 kinetochore complex component -0.35
SYTL4 synaptotagmin-like 4 -0.35
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.35
BRD3 bromodomain containing 3 -0.35
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.35
PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 -0.34
RWDD2A RWD domain containing 2A -0.34
MVP major vault protein -0.34
CD58 CD58 molecule -0.34
PRSS8 protease, serine, 8 -0.34
PWWP2B PWWP domain containing 2B -0.34
NAIF1 nuclear apoptosis inducing factor 1 -0.34
NHSL1 NHS-like 1 -0.33
ISOC2 isochorismatase domain containing 2 -0.33
ZNF865 zinc finger protein 865 -0.33
ITGA1 integrin, alpha 1 -0.33
FANCC Fanconi anemia, complementation group C -0.33
SLC38A7 solute carrier family 38, member 7 -0.32
NFIX nuclear factor I/X (CCAAT-binding transcription factor) -0.32
HBA1 hemoglobin, alpha 1 -0.32
SLC25A44 solute carrier family 25, member 44 -0.32
ARG2 arginase 2 -0.31
ZNF362 zinc finger protein 362 -0.31
FGFBP1 fibroblast growth factor binding protein 1 -0.31
PPP1R14C protein phosphatase 1, regulatory (inhibitor) subunit 14C -0.31
JARID2 jumonji, AT rich interactive domain 2 -0.31
FIG4 FIG4 phosphoinositide 5-phosphatase -0.31
MCTP2 multiple C2 domains, transmembrane 2 -0.31
NDUFA11 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa -0.31
C6ORF141 chromosome 6 open reading frame 141 -0.31
CSPG4 chondroitin sulfate proteoglycan 4 -0.31
TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) -0.3
ABHD6 abhydrolase domain containing 6 -0.3
SERINC5 serine incorporator 5 -0.3
ABCD1 ATP-binding cassette, sub-family D (ALD), member 1 -0.3
SLC25A23 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 -0.29
FAM124A family with sequence similarity 124A -0.29
DCTN2 dynactin 2 (p50) -0.29
KLF4 Kruppel-like factor 4 (gut) -0.29
MERTK MER proto-oncogene, tyrosine kinase -0.29
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 -0.29
HELB helicase (DNA) B -0.29
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.29
SERAC1 serine active site containing 1 -0.28
CHRD chordin -0.28
ADIRF adipogenesis regulatory factor -0.28
BLZF1 basic leucine zipper nuclear factor 1 -0.28
AP4S1 adaptor-related protein complex 4, sigma 1 subunit -0.28
CCDC158 coiled-coil domain containing 158 -0.28
UBQLN2 ubiquilin 2 -0.28
S100A11 S100 calcium binding protein A11 -0.28
TIMM8A translocase of inner mitochondrial membrane 8 homolog A (yeast) -0.28
PEMT phosphatidylethanolamine N-methyltransferase -0.27
MCFD2 multiple coagulation factor deficiency 2 -0.27
CBR1 carbonyl reductase 1 -0.27