Ponatinib_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ponatinib perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ponatinib_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.109085
TXNRD1 thioredoxin reductase 1 0.099441
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0777427
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.076048
EEF2 eukaryotic translation elongation factor 2 0.0700972
AHNAK AHNAK nucleoprotein 0.0604152
GARS1 glycyl-tRNA synthetase 1 0.0567734
CENPF centromere protein F, 350/400kDa 0.0508914
CANX calnexin 0.0480488
VIM vimentin 0.0465672
LDHA lactate dehydrogenase A 0.0449905
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0404618
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0384532
CDK19 cyclin-dependent kinase 19 0.0379866
BCAS3 breast carcinoma amplified sequence 3 0.0375129
RTN4 reticulon 4 0.0367998
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0338636
AARS1 alanyl-tRNA synthetase 1 0.0336867
ERBIN erbb2 interacting protein 0.0324792
AKAP9 A kinase (PRKA) anchor protein 9 0.0322838
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0322303
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0318557
KMT2C lysine (K)-specific methyltransferase 2C 0.0318211
YEATS2 YEATS domain containing 2 0.0316385
TNPO1 transportin 1 0.0313017
GOLGA4 golgin A4 0.0312724
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0312115
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0311507
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0307539
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0303931
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0301291
IARS1 isoleucyl-tRNA synthetase 1 0.0293991
MKI67 marker of proliferation Ki-67 0.0292611
TMEM41B transmembrane protein 41B 0.0291313
ZNF292 zinc finger protein 292 0.0283257
TRERF1 transcriptional regulating factor 1 0.0275483
OGA O-GlcNAcase 0.0274982
XPO1 exportin 1 0.0267774
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.026698
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0259373
ANKRD11 ankyrin repeat domain 11 0.0255642
CLTC clathrin, heavy chain (Hc) 0.0253597
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0252869
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0250195
GPBP1L1 GC-rich promoter binding protein 1-like 1 0.024437
FTH1 ferritin, heavy polypeptide 1 0.0242053
FNIP1 folliculin interacting protein 1 0.0239173
PCBP2 poly(rC) binding protein 2 0.0236594
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0236056
TCEA1 transcription elongation factor A (SII), 1 0.0234929
ANXA1 annexin A1 0.0234795
XPOT exportin, tRNA 0.0234793
MIDEAS mitotic deacetylase associated SANT domain protein 0.0234104
ANKRD50 ankyrin repeat domain 50 0.0231857
NCKAP1 NCK-associated protein 1 0.0231804
WDR26 WD repeat domain 26 0.0226316
EIF1 eukaryotic translation initiation factor 1 0.0225162
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.0223671
MAP4 microtubule-associated protein 4 0.0223098
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0221685
YARS1 tyrosyl-tRNA synthetase 1 0.0221273
CSDE1 cold shock domain containing E1, RNA-binding 0.0220295
BPTF bromodomain PHD finger transcription factor 0.0219136
CEP170 centrosomal protein 170kDa 0.0219126
NCAPD2 non-SMC condensin I complex, subunit D2 0.0218945
RAB6A RAB6A, member RAS oncogene family 0.0218471
UBXN7 UBX domain protein 7 0.0218228
DARS1 aspartyl-tRNA synthetase 1 0.0216799
CKAP5 cytoskeleton associated protein 5 0.0214428
PSAT1 phosphoserine aminotransferase 1 0.0214048
PYGB phosphorylase, glycogen; brain 0.021195
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0211177
CD109 CD109 molecule 0.0211149
ARHGAP12 Rho GTPase activating protein 12 0.0210307
KLHL24 kelch-like family member 24 0.0210039
CUL4B cullin 4B 0.0207883
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0206325
GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 0.0205588
ZNF148 zinc finger protein 148 0.0205301
AVL9 AVL9 homolog (S. cerevisiase) 0.0205107
KIF1B kinesin family member 1B 0.0203542
PUM2 pumilio RNA-binding family member 2 0.0198644
SP3 Sp3 transcription factor 0.0198643
ANLN anillin, actin binding protein 0.0195213
FXR1 fragile X mental retardation, autosomal homolog 1 0.0195211
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0194446
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0194158
SFPQ splicing factor proline/glutamine-rich 0.0194068
RAD23B RAD23 homolog B (S. cerevisiae) 0.0193416
RB1CC1 RB1-inducible coiled-coil 1 0.0193353
ITCH itchy E3 ubiquitin protein ligase 0.0191348
CSNK1A1 casein kinase 1, alpha 1 0.0191343
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0189938
RAI1 retinoic acid induced 1 0.0188513
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0187945
RPRD2 regulation of nuclear pre-mRNA domain containing 2 0.0185758
NUP58 nucleoporin 58 0.0185612
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0185118
STXBP5 syntaxin binding protein 5 (tomosyn) 0.018495
ZFR zinc finger RNA binding protein 0.0184476

decreased expression

Symbol Name Standardized Value
TP63 tumor protein p63 -0.214582
PSD3 pleckstrin and Sec7 domain containing 3 -0.158413
CD44 CD44 molecule (Indian blood group) -0.151482
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.12852
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.123441
PTMA prothymosin, alpha -0.116901
DST dystonin -0.115109
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.102397
CADM2 cell adhesion molecule 2 -0.0997116
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0986908
MT2A metallothionein 2A -0.0964342
HLA-B major histocompatibility complex, class I, B -0.095559
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0905567
PDE10A phosphodiesterase 10A -0.0882666
STAT1 signal transducer and activator of transcription 1, 91kDa -0.08764
RIGI RNA sensor RIG-I -0.0876192
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0854726
ZDHHC14 zinc finger, DHHC-type containing 14 -0.083133
SP100 SP100 nuclear antigen -0.0723591
DNER delta/notch-like EGF repeat containing -0.0714384
CFAP299 cilia and flagella associated protein 299 -0.0694636
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0686143
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.066819
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0663065
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0646834
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0646558
RNF213 ring finger protein 213 -0.0639451
EHBP1 EH domain binding protein 1 -0.0622883
FMNL2 formin-like 2 -0.0605512
PLSCR1 phospholipid scramblase 1 -0.0602431
TSC22D1 TSC22 domain family, member 1 -0.0581912
IFIH1 interferon induced with helicase C domain 1 -0.0557762
VCL vinculin -0.0536854
TNS3 tensin 3 -0.0534293
TM4SF1 transmembrane 4 L six family member 1 -0.0504738
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0504011
TMSB10 thymosin beta 10 -0.0500378
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0492923
TMSB4X thymosin beta 4, X-linked -0.0477169
IFI6 interferon, alpha-inducible protein 6 -0.0449148
RPS8 ribosomal protein S8 -0.044641
TGM2 transglutaminase 2 -0.0445315
RPL35A ribosomal protein L35a -0.0442107
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0431515
ECE1 endothelin converting enzyme 1 -0.042776
EPHA4 EPH receptor A4 -0.0427707
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0419471
BCAR3 breast cancer anti-estrogen resistance 3 -0.0412525
RPS19 ribosomal protein S19 -0.0405929
CAPRIN2 caprin family member 2 -0.0402271
NEK10 NIMA-related kinase 10 -0.0398627
WARS1 tryptophanyl-tRNA synthetase 1 -0.0394395
SOD2 superoxide dismutase 2, mitochondrial -0.0384098
NT5E 5'-nucleotidase, ecto (CD73) -0.0380614
MYOF myoferlin -0.0374843
EFNA5 ephrin-A5 -0.0369341
B2M beta-2-microglobulin -0.0366723
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0359157
RPL36 ribosomal protein L36 -0.0358272
TPT1 tumor protein, translationally-controlled 1 -0.0353068
DPH6 diphthamine biosynthesis 6 -0.0351401
RPL37A ribosomal protein L37a -0.0349516
PMP22 peripheral myelin protein 22 -0.0346234
FTL ferritin, light polypeptide -0.0342968
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0339488
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0338059
SRGN serglycin -0.0336981
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0334547
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0331274
RAB7A RAB7A, member RAS oncogene family -0.0330674
CMIP c-Maf inducing protein -0.0329391
INTS6 integrator complex subunit 6 -0.0319633
NPAS2 neuronal PAS domain protein 2 -0.0319364
PRELID2 PRELI domain containing 2 -0.031874
RPLP2 ribosomal protein, large, P2 -0.0317368
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0315644
THSD4 thrombospondin, type I, domain containing 4 -0.0308886
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0298546
WSB1 WD repeat and SOCS box containing 1 -0.0296141
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0292403
IFITM1 interferon induced transmembrane protein 1 -0.0291607
HDAC9 histone deacetylase 9 -0.0287577
ZNFX1 zinc finger, NFX1-type containing 1 -0.028609
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0284481
RPL31 ribosomal protein L31 -0.0284341
RUNX1 runt-related transcription factor 1 -0.0282859
PTK2 protein tyrosine kinase 2 -0.0282176
VMP1 vacuole membrane protein 1 -0.0282139
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0282014
RPS24 ribosomal protein S24 -0.0279057
CDK6 cyclin-dependent kinase 6 -0.0278766
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0277276
RPS6 ribosomal protein S6 -0.0275953
RPL38 ribosomal protein L38 -0.0275459
MACF1 microtubule-actin crosslinking factor 1 -0.0272489
RPL12 ribosomal protein L12 -0.0271957
SDK1 sidekick cell adhesion molecule 1 -0.0270488
DENND1A DENN/MADD domain containing 1A -0.0269833
PRKCE protein kinase C, epsilon -0.0265815
PARP9 poly (ADP-ribose) polymerase family, member 9 -0.0262371