Ponatinib_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ponatinib perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ponatinib_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.112933
IGFBP3 insulin-like growth factor binding protein 3 0.107676
COL6A3 collagen, type VI, alpha 3 0.08658
SOD2 superoxide dismutase 2, mitochondrial 0.0809431
FTH1 ferritin, heavy polypeptide 1 0.0781644
HILPDA hypoxia inducible lipid droplet-associated 0.0765053
TGFBI transforming growth factor, beta-induced, 68kDa 0.0721427
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.066834
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0656472
MYH9 myosin, heavy chain 9, non-muscle 0.0626494
PRELID2 PRELI domain containing 2 0.0617579
HLA-B major histocompatibility complex, class I, B 0.0597068
B2M beta-2-microglobulin 0.059399
TENT5A terminal nucleotidyltransferase 5A 0.0585905
FAM13A family with sequence similarity 13, member A 0.0545989
HOOK2 hook microtubule-tethering protein 2 0.0533567
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0531562
NDRG1 N-myc downstream regulated 1 0.0486259
SDC4 syndecan 4 0.0470871
ZNF292 zinc finger protein 292 0.0469595
PDIA3 protein disulfide isomerase family A, member 3 0.0456115
MBNL2 muscleblind-like splicing regulator 2 0.0452732
LGALS3 lectin, galactoside-binding, soluble, 3 0.0449472
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0443038
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.043988
AKAP9 A kinase (PRKA) anchor protein 9 0.043109
LOXL2 lysyl oxidase-like 2 0.0423244
CALR calreticulin 0.0412084
IGF2 insulin-like growth factor 2 0.0411921
ZNF395 zinc finger protein 395 0.0399466
ARRDC3 arrestin domain containing 3 0.038073
SPTBN1 spectrin, beta, non-erythrocytic 1 0.037953
N4BP2L2 NEDD4 binding protein 2-like 2 0.0368774
SUCO SUN domain containing ossification factor 0.036825
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0360686
FNIP1 folliculin interacting protein 1 0.036058
ZMIZ1 zinc finger, MIZ-type containing 1 0.0356676
SKIC3 SKI3 subunit of superkiller complex 0.0351333
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0350265
COL5A2 collagen, type V, alpha 2 0.0341676
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 0.0340178
PRRC1 proline-rich coiled-coil 1 0.0339838
EGFR epidermal growth factor receptor 0.0338564
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0337481
UGCG UDP-glucose ceramide glucosyltransferase 0.0336005
CANX calnexin 0.0326651
HELZ helicase with zinc finger 0.0323217
RAB1A RAB1A, member RAS oncogene family 0.032025
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0316781
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0314865
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0314242
PDIA4 protein disulfide isomerase family A, member 4 0.0306765
STK4 serine/threonine kinase 4 0.0304918
COL5A1 collagen, type V, alpha 1 0.0299631
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0297945
TNIP1 TNFAIP3 interacting protein 1 0.0296938
HDLBP high density lipoprotein binding protein 0.0289621
ZZZ3 zinc finger, ZZ-type containing 3 0.0286505
SSBP2 single-stranded DNA binding protein 2 0.0276762
PTGES2 prostaglandin E synthase 2 0.0276415
FLNA filamin A, alpha 0.027394
COPA coatomer protein complex, subunit alpha 0.0272312
DSCAM Down syndrome cell adhesion molecule 0.027106
ITM2B integral membrane protein 2B 0.0267455
NBAS neuroblastoma amplified sequence 0.0267132
RAB8B RAB8B, member RAS oncogene family 0.0266252
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25 0.0264849
GANAB glucosidase, alpha; neutral AB 0.0264237
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0264159
ZNF160 zinc finger protein 160 0.0263148
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0262922
SEPTIN9 septin 9 0.0260012
PPP1R12B protein phosphatase 1, regulatory subunit 12B 0.0259223
NFE2L1 nuclear factor, erythroid 2-like 1 0.0257197
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0256951
SCARB2 scavenger receptor class B, member 2 0.025679
ANKHD1 ankyrin repeat and KH domain containing 1 0.0256768
RINT1 RAD50 interactor 1 0.0255749
CD109 CD109 molecule 0.0254255
CCNG2 cyclin G2 0.0253749
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 0.025336
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.0249856
PHF21A PHD finger protein 21A 0.0247287
MTREX Mtr4 exosome RNA helicase 0.0245125
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0244701
CYLD cylindromatosis (turban tumor syndrome) 0.0243028
DDR2 discoidin domain receptor tyrosine kinase 2 0.0240019
VCAM1 vascular cell adhesion molecule 1 0.0239738
AVL9 AVL9 homolog (S. cerevisiase) 0.0239157
SEC24A SEC24 family member A 0.0238965
NME7 NME/NM23 family member 7 0.0237725
RNASE3 ribonuclease, RNase A family, 3 0.0236725
NRXN3 neurexin 3 0.0235959
USP37 ubiquitin specific peptidase 37 0.0234628
ESYT2 extended synaptotagmin-like protein 2 0.0234552
CD47 CD47 molecule 0.0234549
PUM1 pumilio RNA-binding family member 1 0.0234443
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 0.0231781
TFG TRK-fused gene 0.0231742
HLA-C major histocompatibility complex, class I, C 0.0230699

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.233544
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.152771
VIM vimentin -0.151668
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.131295
TMSB10 thymosin beta 10 -0.123126
EXT1 exostosin glycosyltransferase 1 -0.113277
F3 coagulation factor III (thromboplastin, tissue factor) -0.109587
PSD3 pleckstrin and Sec7 domain containing 3 -0.101983
CXCL8 chemokine (C-X-C motif) ligand 8 -0.09519
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0947371
COL1A1 collagen, type I, alpha 1 -0.0941272
FN1 fibronectin 1 -0.0872106
GLIS3 GLIS family zinc finger 3 -0.0829981
PTMA prothymosin, alpha -0.0808439
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0754734
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0753503
CALD1 caldesmon 1 -0.0750095
PRSS23 protease, serine, 23 -0.0726147
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0712897
STC1 stanniocalcin 1 -0.0703083
CD44 CD44 molecule (Indian blood group) -0.0688892
CDK6 cyclin-dependent kinase 6 -0.0683651
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0650156
RRBP1 ribosome binding protein 1 -0.0641807
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0621253
HMGA2 high mobility group AT-hook 2 -0.0616223
HIPK2 homeodomain interacting protein kinase 2 -0.0614415
MAP1B microtubule-associated protein 1B -0.0612943
FTL ferritin, light polypeptide -0.0606002
EFNA5 ephrin-A5 -0.0599994
MT1X metallothionein 1X -0.0595647
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0572406
ANKRD11 ankyrin repeat domain 11 -0.0564565
VCL vinculin -0.0554065
POTEF POTE ankyrin domain family, member F -0.0531878
MED13L mediator complex subunit 13-like -0.0525198
SEPTIN7 septin 7 -0.0518645
CALU calumenin -0.0513708
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0501371
ENO1 enolase 1, (alpha) -0.0497144
TUBB tubulin, beta class I -0.0496257
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0493174
TPM4 tropomyosin 4 -0.0480875
RTN4 reticulon 4 -0.0454037
ADNP activity-dependent neuroprotector homeobox -0.0448033
PTK2 protein tyrosine kinase 2 -0.0445797
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0441529
AHNAK AHNAK nucleoprotein -0.0441016
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0436667
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0429002
PDE10A phosphodiesterase 10A -0.0424856
TM4SF1 transmembrane 4 L six family member 1 -0.0416175
RPLP1 ribosomal protein, large, P1 -0.0412919
TXNRD1 thioredoxin reductase 1 -0.0408482
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0406352
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0402624
CBX3 chromobox homolog 3 -0.0398962
RPL37A ribosomal protein L37a -0.0398915
CDH13 cadherin 13 -0.0392334
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0390475
ASPH aspartate beta-hydroxylase -0.0386965
PKM pyruvate kinase, muscle -0.0380331
NAV1 neuron navigator 1 -0.0375502
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0373028
ZFAND3 zinc finger, AN1-type domain 3 -0.037281
H3-3B H3.3 histone B -0.0366813
NALF1 NALCN channel auxiliary factor 1 -0.0365838
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0365668
KAZN kazrin, periplakin interacting protein -0.0357773
PRRC2C proline-rich coiled-coil 2C -0.0354412
TPI1 triosephosphate isomerase 1 -0.0348235
TMEM165 transmembrane protein 165 -0.0338238
FBXO11 F-box protein 11 -0.0331286
MACF1 microtubule-actin crosslinking factor 1 -0.032999
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0322568
RPS24 ribosomal protein S24 -0.0322102
CAV1 caveolin 1, caveolae protein, 22kDa -0.0321472
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0320861
NAP1L1 nucleosome assembly protein 1-like 1 -0.0320781
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0320721
ANKRD12 ankyrin repeat domain 12 -0.0320328
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0316324
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0315298
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0314474
WNK1 WNK lysine deficient protein kinase 1 -0.0310816
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0310543
MEF2A myocyte enhancer factor 2A -0.0309917
ACTG1 actin gamma 1 -0.0305819
GNAS GNAS complex locus -0.0304108
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0302471
WDR26 WD repeat domain 26 -0.030089
TRIO trio Rho guanine nucleotide exchange factor -0.0300327
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0299716
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0299195
HIP1 huntingtin interacting protein 1 -0.0296649
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.029608
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0293911
FRMD4A FERM domain containing 4A -0.0291536
RAB31 RAB31, member RAS oncogene family -0.0290216
NIPBL Nipped-B homolog (Drosophila) -0.0285759