Pralsetinib_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.356055
VIM vimentin 0.196412
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.191943
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0715949
LOC112694756 uncharaterized LOC112694756 0.0701286
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0667483
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0660156
ENO1 enolase 1, (alpha) 0.0653374
ASPH aspartate beta-hydroxylase 0.0634202
HSPA8 heat shock 70kDa protein 8 0.0624508
FXR1 fragile X mental retardation, autosomal homolog 1 0.0612074
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0602553
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0600612
LDHA lactate dehydrogenase A 0.0590314
BIRC3 baculoviral IAP repeat containing 3 0.0565038
TPI1 triosephosphate isomerase 1 0.0546779
ANXA1 annexin A1 0.0542009
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0539919
CANX calnexin 0.051852
EIF1 eukaryotic translation initiation factor 1 0.0510393
ZSWIM6 zinc finger, SWIM-type containing 6 0.0498529
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0485173
USP9X ubiquitin specific peptidase 9, X-linked 0.0430044
PDE4D phosphodiesterase 4D, cAMP-specific 0.0429126
IPO7 importin 7 0.0423906
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0419781
CLTC clathrin, heavy chain (Hc) 0.0412792
CDK6 cyclin-dependent kinase 6 0.0410444
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0401443
PEG10 paternally expressed 10 0.0399756
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0393043
RPLP0 ribosomal protein, large, P0 0.0382681
CALR calreticulin 0.0381524
DST dystonin 0.036764
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0364385
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0363558
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0359666
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0353846
RRM2 ribonucleotide reductase M2 0.0352575
EEF2 eukaryotic translation elongation factor 2 0.0350628
YAP1 Yes-associated protein 1 0.0346362
PGK1 phosphoglycerate kinase 1 0.034556
TXNRD1 thioredoxin reductase 1 0.0341676
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.0341337
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0336128
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0333088
RACK1 receptor for activated C kinase 1 0.0329536
MYH9 myosin, heavy chain 9, non-muscle 0.0326693
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0318697
PABPC1 poly(A) binding protein, cytoplasmic 1 0.031524
RPL3 ribosomal protein L3 0.0305812
PCBP2 poly(rC) binding protein 2 0.0303534
SQSTM1 sequestosome 1 0.030121
RPS12 ribosomal protein S12 0.0301041
EIF4A2 eukaryotic translation initiation factor 4A2 0.0299992
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.029816
STARD4 StAR-related lipid transfer (START) domain containing 4 0.0297464
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0297264
RPL4 ribosomal protein L4 0.0294926
DSPP dentin sialophosphoprotein 0.0289692
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0289226
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0286869
BZW1 basic leucine zipper and W2 domains 1 0.028556
MYPN myopalladin 0.0282157
PCDH9 protocadherin 9 0.0272841
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0269768
NFE2L2 nuclear factor, erythroid 2-like 2 0.0268419
SPTBN1 spectrin, beta, non-erythrocytic 1 0.026565
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0259376
INTS6 integrator complex subunit 6 0.025894
RPS3 ribosomal protein S3 0.0258732
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.025309
TTC3 tetratricopeptide repeat domain 3 0.0251594
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0251431
SET SET nuclear proto-oncogene 0.0249921
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0246238
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha 0.0242859
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0242721
CD164 CD164 molecule, sialomucin 0.023877
NFE2L1 nuclear factor, erythroid 2-like 1 0.0230152
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0229819
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.02292
HSPH1 heat shock 105kDa/110kDa protein 1 0.0229136
PLK2 polo-like kinase 2 0.0228566
DENND5A DENN/MADD domain containing 5A 0.0227752
SPAG9 sperm associated antigen 9 0.0226886
PDIA6 protein disulfide isomerase family A, member 6 0.0226048
CEP350 centrosomal protein 350kDa 0.0225153
TPM3 tropomyosin 3 0.0224986
NAMPT nicotinamide phosphoribosyltransferase 0.022462
RPL7 ribosomal protein L7 0.0221465
TPR translocated promoter region, nuclear basket protein 0.0221076
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0221067
NIPBL Nipped-B homolog (Drosophila) 0.0219971
OSBPL8 oxysterol binding protein-like 8 0.0219564
GOLGB1 golgin B1 0.0218912
EPHA6 EPH receptor A6 0.0211944
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0211133
PCM1 pericentriolar material 1 0.020885
UBC ubiquitin C 0.0208711

decreased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 -0.178586
TMSB10 thymosin beta 10 -0.137835
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.126209
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0721279
EGR1 early growth response 1 -0.0716263
NHSL1 NHS-like 1 -0.0694794
MYL12B myosin, light chain 12B, regulatory -0.0648672
RASAL2 RAS protein activator like 2 -0.0563068
AREG amphiregulin -0.0516972
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0508427
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0493897
HMGA1 high mobility group AT-hook 1 -0.0468759
RPL35A ribosomal protein L35a -0.0468375
CELF2 CUGBP, Elav-like family member 2 -0.0467769
SLC38A2 solute carrier family 38, member 2 -0.0450943
PFN1 profilin 1 -0.0448896
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0437673
RPS21 ribosomal protein S21 -0.0393753
FTL ferritin, light polypeptide -0.0372397
TRA2B transformer 2 beta homolog (Drosophila) -0.0370722
RPLP2 ribosomal protein, large, P2 -0.0365494
ACTG1 actin gamma 1 -0.0363221
ATP5F1B ATP synthase F1 subunit beta -0.0359307
RPL23 ribosomal protein L23 -0.0344654
CNRIP1 cannabinoid receptor interacting protein 1 -0.0336427
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0329723
RBMX RNA binding motif protein, X-linked -0.0326646
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.032514
RPS19 ribosomal protein S19 -0.032181
RPS29 ribosomal protein S29 -0.0312533
ZBTB20 zinc finger and BTB domain containing 20 -0.0304589
ANKRD28 ankyrin repeat domain 28 -0.0303696
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0296046
RPL8 ribosomal protein L8 -0.0293883
BCHE butyrylcholinesterase -0.0292686
EHBP1 EH domain binding protein 1 -0.0292003
NABP1 nucleic acid binding protein 1 -0.0286491
ZNF804A zinc finger protein 804A -0.0285594
SMC4 structural maintenance of chromosomes 4 -0.028186
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0281137
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0276182
CMIP c-Maf inducing protein -0.0275749
NAV3 neuron navigator 3 -0.0267782
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0264516
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0263723
USP34 ubiquitin specific peptidase 34 -0.0259648
DPYD dihydropyrimidine dehydrogenase -0.0252992
CUX1 cut-like homeobox 1 -0.0251536
HSPB1 heat shock 27kDa protein 1 -0.0251529
RPS13 ribosomal protein S13 -0.0251269
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0249937
RPS15 ribosomal protein S15 -0.0249262
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.024495
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0242242
GCG glucagon -0.0241158
RSRC1 arginine/serine-rich coiled-coil 1 -0.0239535
KIF18B kinesin family member 18B -0.0239463
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0236726
RPL34 ribosomal protein L34 -0.023316
RPL28 ribosomal protein L28 -0.0231939
TGM2 transglutaminase 2 -0.0231798
RPL36 ribosomal protein L36 -0.0230072
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0225605
RPL38 ribosomal protein L38 -0.0223383
TSPAN5 tetraspanin 5 -0.022161
PCDH7 protocadherin 7 -0.0218636
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0216156
FUS FUS RNA binding protein -0.0215948
RPS23 ribosomal protein S23 -0.0215352
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0213922
RPS11 ribosomal protein S11 -0.0212133
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) -0.0210231
THSD4 thrombospondin, type I, domain containing 4 -0.0210055
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0209163
RTN4 reticulon 4 -0.0208202
CCND1 cyclin D1 -0.0206853
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0203635
ATN1 atrophin 1 -0.020332
MAP4 microtubule-associated protein 4 -0.0201989
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0196945
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0194449
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0191466
MTCL1 microtubule crosslinking factor 1 -0.0190931
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0189252
WDR43 WD repeat domain 43 -0.0188659
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0188621
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0188216
RPS27 ribosomal protein S27 -0.0182684
TRIO trio Rho guanine nucleotide exchange factor -0.0182611
KPNB1 karyopherin (importin) beta 1 -0.0182287
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase -0.0179938
RABGAP1L RAB GTPase activating protein 1-like -0.0179866
RPS24 ribosomal protein S24 -0.017675
RPL11 ribosomal protein L11 -0.0176444
ZFP64 ZFP64 zinc finger protein -0.0176353
TMEM41B transmembrane protein 41B -0.0173253
RPS14 ribosomal protein S14 -0.0170713
YBX3 Y box binding protein 3 -0.0169873
DLC1 DLC1 Rho GTPase activating protein -0.0168333
UBE2K ubiquitin-conjugating enzyme E2K -0.0167464