Pralsetinib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.203612
VCL vinculin 0.149486
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.129063
ZSWIM6 zinc finger, SWIM-type containing 6 0.121061
FMN1 formin 1 0.119687
DST dystonin 0.104907
TLE4 transducin-like enhancer of split 4 0.101287
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0740586
MYH9 myosin, heavy chain 9, non-muscle 0.0729225
PTPRD protein tyrosine phosphatase, receptor type, D 0.0700588
SLIT2 slit homolog 2 (Drosophila) 0.069723
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0676792
NPAS2 neuronal PAS domain protein 2 0.0660263
TIMP3 TIMP metallopeptidase inhibitor 3 0.0652941
PCBP2 poly(rC) binding protein 2 0.0636123
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0558378
ASPH aspartate beta-hydroxylase 0.0542107
PRRC2C proline-rich coiled-coil 2C 0.0540324
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0505204
PCDH9 protocadherin 9 0.0488425
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0487232
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0484624
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0465725
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0465463
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0462144
MEIS2 Meis homeobox 2 0.0460548
EEF2 eukaryotic translation elongation factor 2 0.0448482
PTMA prothymosin, alpha 0.04477
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0444943
MYO1E myosin IE 0.0436183
ENAH enabled homolog (Drosophila) 0.0429714
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0425562
EIF3A eukaryotic translation initiation factor 3, subunit A 0.042347
PRKCA protein kinase C, alpha 0.0412794
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0410166
HSPA8 heat shock 70kDa protein 8 0.0401415
INTS6 integrator complex subunit 6 0.0399377
MACF1 microtubule-actin crosslinking factor 1 0.0399027
FERMT2 fermitin family member 2 0.0398761
FAM13A family with sequence similarity 13, member A 0.0396265
NFE2L2 nuclear factor, erythroid 2-like 2 0.0394122
LOC102724023 ES1 protein homolog, mitochondrial 0.0393606
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0391288
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0381669
CLTC clathrin, heavy chain (Hc) 0.038154
ITGA1 integrin, alpha 1 0.0376216
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0375506
SET SET nuclear proto-oncogene 0.0371848
CSDE1 cold shock domain containing E1, RNA-binding 0.0370942
CENPF centromere protein F, 350/400kDa 0.0369676
HOMER1 homer scaffolding protein 1 0.0363487
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0363306
TPM1 tropomyosin 1 (alpha) 0.0358774
MEF2A myocyte enhancer factor 2A 0.0356413
CTNND1 catenin (cadherin-associated protein), delta 1 0.035614
PDLIM5 PDZ and LIM domain 5 0.0355894
RAD51B RAD51 paralog B 0.0352561
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0348392
MRTFA myocardin related transcription factor A 0.0346056
SMYD3 SET and MYND domain containing 3 0.0344634
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 0.0340385
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0338252
ARHGAP9 Rho GTPase activating protein 9 0.0337331
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0335638
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0335158
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0333968
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0332332
TCF12 transcription factor 12 0.0331522
ZNF638 zinc finger protein 638 0.0329696
ATXN1 ataxin 1 0.0329547
NRIP1 nuclear receptor interacting protein 1 0.0327392
FAM107B family with sequence similarity 107, member B 0.0323588
MBNL1 muscleblind-like splicing regulator 1 0.032148
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0320473
UNC5C unc-5 homolog C (C. elegans) 0.0319735
ADGRB3 adhesion G protein-coupled receptor B3 0.0319453
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0313803
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0313262
APP amyloid beta (A4) precursor protein 0.0311517
PEAK1 pseudopodium-enriched atypical kinase 1 0.0310809
LPP LIM domain containing preferred translocation partner in lipoma 0.0307211
RPL7 ribosomal protein L7 0.0305702
SEPTIN9 septin 9 0.0305088
B2M beta-2-microglobulin 0.0298346
SIK3 SIK family kinase 3 0.0297157
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0291179
FRMD5 FERM domain containing 5 0.0288212
RABGAP1L RAB GTPase activating protein 1-like 0.0287581
LPIN1 lipin 1 0.0286634
GPATCH2L G patch domain containing 2-like 0.0286323
RUNX1 runt-related transcription factor 1 0.0285018
FXR1 fragile X mental retardation, autosomal homolog 1 0.0282381
PTPRK protein tyrosine phosphatase, receptor type, K 0.027677
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0276211
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0274902
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0274062
CCDC88A coiled-coil domain containing 88A 0.0273901
MCL1 myeloid cell leukemia 1 0.0271895
KDM4C lysine (K)-specific demethylase 4C 0.027187
AKAP12 A kinase (PRKA) anchor protein 12 0.0267055

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.448819
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.11804
COL1A1 collagen, type I, alpha 1 -0.0874115
NRG1 neuregulin 1 -0.0700467
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0517784
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0493339
TPT1 tumor protein, translationally-controlled 1 -0.0456695
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0412611
FRMD4A FERM domain containing 4A -0.0402554
TMSB10 thymosin beta 10 -0.0395427
FTL ferritin, light polypeptide -0.0367255
H3-3B H3.3 histone B -0.0362721
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0356085
NDRG1 N-myc downstream regulated 1 -0.0338401
RPS24 ribosomal protein S24 -0.0337267
RPL38 ribosomal protein L38 -0.0320343
HAND2 heart and neural crest derivatives expressed 2 -0.0296612
IGFBP4 insulin-like growth factor binding protein 4 -0.0294369
ANTXR1 anthrax toxin receptor 1 -0.0280957
PLAT plasminogen activator, tissue -0.0276476
ZBTB20 zinc finger and BTB domain containing 20 -0.0271341
TRIO trio Rho guanine nucleotide exchange factor -0.0262886
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0261253
RPL28 ribosomal protein L28 -0.0256811
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0254852
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0254629
TNRC6B trinucleotide repeat containing 6B -0.0252745
ACBD3 acyl-CoA binding domain containing 3 -0.0240569
GCC2 GRIP and coiled-coil domain containing 2 -0.0235403
RPL9 ribosomal protein L9 -0.0232921
CCND1 cyclin D1 -0.0232367
TPST1 tyrosylprotein sulfotransferase 1 -0.0225774
SREBF2 sterol regulatory element binding transcription factor 2 -0.0223745
RPS19 ribosomal protein S19 -0.0223401
KPNB1 karyopherin (importin) beta 1 -0.0216969
KLHL5 kelch-like family member 5 -0.0215025
CDC27 cell division cycle 27 -0.0211692
NPEPPS aminopeptidase puromycin sensitive -0.021125
PSD3 pleckstrin and Sec7 domain containing 3 -0.021101
FTH1 ferritin, heavy polypeptide 1 -0.0209905
FNDC3B fibronectin type III domain containing 3B -0.0208387
RPLP1 ribosomal protein, large, P1 -0.0206353
ACTG1 actin gamma 1 -0.0206073
NALF1 NALCN channel auxiliary factor 1 -0.0205732
RPS29 ribosomal protein S29 -0.0204867
FKBP10 FK506 binding protein 10, 65 kDa -0.0203895
USP36 ubiquitin specific peptidase 36 -0.0203395
WDR45B WD repeat domain 45B -0.0200002
RPL35A ribosomal protein L35a -0.0199657
RAB5A RAB5A, member RAS oncogene family -0.0196658
WSB1 WD repeat and SOCS box containing 1 -0.0196141
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0195246
RPL34 ribosomal protein L34 -0.0193163
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.019204
LMNA lamin A/C -0.0191966
THSD4 thrombospondin, type I, domain containing 4 -0.0191775
HIP1 huntingtin interacting protein 1 -0.0191161
RPS21 ribosomal protein S21 -0.0190964
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0189913
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0187962
ZFAND6 zinc finger, AN1-type domain 6 -0.0185561
MAP4 microtubule-associated protein 4 -0.0185255
CLINT1 clathrin interactor 1 -0.0179702
ZFC3H1 zinc finger, C3H1-type containing -0.0177128
COL18A1 collagen, type XVIII, alpha 1 -0.0177073
H1-0 H1.0 linker histone -0.017634
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae) -0.017575
PRRC2B proline-rich coiled-coil 2B -0.0173624
ARF1 ADP-ribosylation factor 1 -0.0172548
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0172485
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.017229
RPL7A ribosomal protein L7a -0.0172193
ZFAND3 zinc finger, AN1-type domain 3 -0.0171918
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0169776
ATP5F1B ATP synthase F1 subunit beta -0.0169554
RAB2A RAB2A, member RAS oncogene family -0.0169445
PIBF1 progesterone immunomodulatory binding factor 1 -0.0168698
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0166972
NEK7 NIMA-related kinase 7 -0.0166706
BRWD1 bromodomain and WD repeat domain containing 1 -0.0165976
GAS7 growth arrest-specific 7 -0.0165714
RHEB Ras homolog enriched in brain -0.0165074
ATXN3 ataxin 3 -0.016461
C1ORF21 chromosome 1 open reading frame 21 -0.0164516
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0163914
IGF1R insulin-like growth factor 1 receptor -0.0163548
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0162673
PARD3 par-3 family cell polarity regulator -0.0162193
CEMIP cell migration inducing protein, hyaluronan binding -0.016167
HDLBP high density lipoprotein binding protein -0.0161091
FN1 fibronectin 1 -0.0161021
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0160099
GDF15 growth differentiation factor 15 -0.0159951
TMEM263 transmembrane protein 263 -0.0159036
KLHL24 kelch-like family member 24 -0.0158795
IFI16 interferon, gamma-inducible protein 16 -0.0157281
FOXK1 forkhead box K1 -0.0157028
FCHSD2 FCH and double SH3 domains 2 -0.0156684
ANTXR2 anthrax toxin receptor 2 -0.0155529
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit -0.0155447