Pralsetinib_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.293777
EXT1 exostosin glycosyltransferase 1 0.149237
SMAD3 SMAD family member 3 0.145311
SPTBN1 spectrin, beta, non-erythrocytic 1 0.12693
AKAP13 A kinase (PRKA) anchor protein 13 0.114212
MACC1 metastasis associated in colon cancer 1 0.0949403
ASPH aspartate beta-hydroxylase 0.0862844
DST dystonin 0.0858184
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0838158
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0761334
GCLC glutamate-cysteine ligase, catalytic subunit 0.0739699
ZSWIM6 zinc finger, SWIM-type containing 6 0.0590099
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0582333
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0556892
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0530044
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0528165
FAT1 FAT atypical cadherin 1 0.05276
TSC22D1 TSC22 domain family, member 1 0.0523054
ENO1 enolase 1, (alpha) 0.0521469
MYO1E myosin IE 0.0520007
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0514831
HKDC1 hexokinase domain containing 1 0.0499475
ZNF292 zinc finger protein 292 0.0497033
ETV6 ets variant 6 0.0486866
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0486746
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0486671
DSPP dentin sialophosphoprotein 0.0481684
KYNU kynureninase 0.0481463
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0477509
RNF213 ring finger protein 213 0.0473453
SIK3 SIK family kinase 3 0.0473397
CANX calnexin 0.0453422
ERN1 endoplasmic reticulum to nucleus signaling 1 0.044879
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0438632
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0435286
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0431456
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0423199
FNIP2 folliculin interacting protein 2 0.0412243
FNIP1 folliculin interacting protein 1 0.0410189
PDZD8 PDZ domain containing 8 0.0409593
LCN2 lipocalin 2 0.0407976
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0406785
ALCAM activated leukocyte cell adhesion molecule 0.0393176
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0387309
TJP1 tight junction protein 1 0.0385187
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0382535
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0375985
INTS6 integrator complex subunit 6 0.0362924
NFE2L2 nuclear factor, erythroid 2-like 2 0.0362056
YAP1 Yes-associated protein 1 0.0359795
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0357625
DIAPH1 diaphanous-related formin 1 0.0354129
DSCAM Down syndrome cell adhesion molecule 0.0346292
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0345786
MYO5B myosin VB 0.0341743
FNDC3B fibronectin type III domain containing 3B 0.0340795
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0337648
RBM47 RNA binding motif protein 47 0.0334224
LPP LIM domain containing preferred translocation partner in lipoma 0.0333612
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0327075
RAB10 RAB10, member RAS oncogene family 0.0327013
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0325802
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0315025
MYH9 myosin, heavy chain 9, non-muscle 0.0314172
EFNB2 ephrin-B2 0.0313729
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0305666
JMJD1C jumonji domain containing 1C 0.030314
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0302939
ERBIN erbb2 interacting protein 0.0301398
LURAP1L leucine rich adaptor protein 1-like 0.0300657
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0299267
MAP7 microtubule-associated protein 7 0.0295931
CEMIP cell migration inducing protein, hyaluronan binding 0.0293551
MYOF myoferlin 0.0292628
MACF1 microtubule-actin crosslinking factor 1 0.0290635
DPP4 dipeptidyl-peptidase 4 0.0289228
TMEM65 transmembrane protein 65 0.0288183
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0287535
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0285637
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0283769
LOC102724023 ES1 protein homolog, mitochondrial 0.0282953
ZHX2 zinc fingers and homeoboxes 2 0.0281536
KLF5 Kruppel-like factor 5 (intestinal) 0.0278663
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0278317
CXCL8 chemokine (C-X-C motif) ligand 8 0.0264177
SET SET nuclear proto-oncogene 0.0263458
TRIM2 tripartite motif containing 2 0.0263334
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0262131
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0261747
RPL7L1 ribosomal protein L7-like 1 0.0261523
RPLP0 ribosomal protein, large, P0 0.0261213
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0257606
AFF4 AF4/FMR2 family, member 4 0.0256886
ADAM10 ADAM metallopeptidase domain 10 0.0249123
CTNND1 catenin (cadherin-associated protein), delta 1 0.0248588
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0247245
LOC112694756 uncharaterized LOC112694756 0.024463
PPARG peroxisome proliferator-activated receptor gamma 0.0243769
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.024276
TOX3 TOX high mobility group box family member 3 0.0241119

decreased expression

Symbol Name Standardized Value
TPT1 tumor protein, translationally-controlled 1 -0.100194
ZMYND8 zinc finger, MYND-type containing 8 -0.0954092
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0815617
XAF1 XIAP associated factor 1 -0.0741537
EGR1 early growth response 1 -0.0729687
LYZ lysozyme -0.0726132
TXNIP thioredoxin interacting protein -0.0725403
HLA-B major histocompatibility complex, class I, B -0.0633371
NDRG1 N-myc downstream regulated 1 -0.0632257
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0502108
ITGA6 integrin, alpha 6 -0.0493183
EZR ezrin -0.0493033
NPSR1 neuropeptide S receptor 1 -0.0487581
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0440757
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0438625
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0423337
TSHZ2 teashirt zinc finger homeobox 2 -0.0418828
HLA-C major histocompatibility complex, class I, C -0.0409535
NCKAP5 NCK-associated protein 5 -0.0404028
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0402106
BTBD9 BTB (POZ) domain containing 9 -0.0395832
SQSTM1 sequestosome 1 -0.0389952
RHOBTB3 Rho-related BTB domain containing 3 -0.0383344
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0379012
ZMYM2 zinc finger, MYM-type 2 -0.0358626
MUC20 mucin 20, cell surface associated -0.0353457
ARHGAP26 Rho GTPase activating protein 26 -0.0350222
H1-0 H1.0 linker histone -0.0348033
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0347883
PATJ PATJ crumbs cell polarity complex component -0.0340183
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0322294
IFI27 interferon, alpha-inducible protein 27 -0.0309476
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0301734
STS steroid sulfatase (microsomal), isozyme S -0.0296254
TNS4 tensin 4 -0.029522
CCNL1 cyclin L1 -0.0293433
RNF43 ring finger protein 43 -0.0290854
GMDS GDP-mannose 4,6-dehydratase -0.0289857
FTL ferritin, light polypeptide -0.0267688
PRKCA protein kinase C, alpha -0.026724
NCOA7 nuclear receptor coactivator 7 -0.0266168
TMEM62 transmembrane protein 62 -0.0265924
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.025886
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0258331
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0253188
OASL 2'-5'-oligoadenylate synthetase-like -0.0248778
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0247426
MECOM MDS1 and EVI1 complex locus -0.0247099
NKD1 naked cuticle homolog 1 (Drosophila) -0.0246114
CSTB cystatin B (stefin B) -0.0243539
GNAS GNAS complex locus -0.0243015
LLGL2 lethal giant larvae homolog 2 (Drosophila) -0.0239549
WSB1 WD repeat and SOCS box containing 1 -0.0238288
ACTN4 actinin, alpha 4 -0.0231879
BICRAL BICRA like chromatin remodeling complex associated protein -0.0229651
MBD5 methyl-CpG binding domain protein 5 -0.0226941
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0226804
NCOR1 nuclear receptor corepressor 1 -0.0226522
TMSB10 thymosin beta 10 -0.0226323
SDCBP2 syndecan binding protein (syntenin) 2 -0.0226319
TFRC transferrin receptor -0.0222929
ITPKC inositol-trisphosphate 3-kinase C -0.0222439
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) -0.0222094
DIAPH3 diaphanous-related formin 3 -0.0222039
C6ORF132 chromosome 6 open reading frame 132 -0.0220562
SAMD12 sterile alpha motif domain containing 12 -0.0218285
PCED1B PC-esterase domain containing 1B -0.0215747
TPM4 tropomyosin 4 -0.0215728
RPL34 ribosomal protein L34 -0.0215218
RBM39 RNA binding motif protein 39 -0.0213944
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0211108
LCORL ligand dependent nuclear receptor corepressor-like -0.0210018
FOXP1 forkhead box P1 -0.0208554
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0207818
NECTIN2 nectin cell adhesion molecule 2 -0.0206145
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.020425
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0203281
PLCH1 phospholipase C, eta 1 -0.0203001
RPL35A ribosomal protein L35a -0.0202144
FOXO3 forkhead box O3 -0.0199809
IFI6 interferon, alpha-inducible protein 6 -0.0199713
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.019898
SPG11 spastic paraplegia 11 (autosomal recessive) -0.0198857
PLAUR plasminogen activator, urokinase receptor -0.0198002
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0197142
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0195504
MXD1 MAX dimerization protein 1 -0.0195024
STAT2 signal transducer and activator of transcription 2, 113kDa -0.0194883
PTBP3 polypyrimidine tract binding protein 3 -0.0194681
MAML2 mastermind-like 2 (Drosophila) -0.0193023
RIGI RNA sensor RIG-I -0.0192986
TMEM165 transmembrane protein 165 -0.0192774
CLYBL citrate lyase beta like -0.019229
TC2N tandem C2 domains, nuclear -0.0191779
IFT88 intraflagellar transport 88 -0.0191735
JUP junction plakoglobin -0.0191397
ZDHHC20 zinc finger, DHHC-type containing 20 -0.0190582
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0190211
IRF1 interferon regulatory factor 1 -0.0187781
SCARB1 scavenger receptor class B, member 1 -0.018595