Pralsetinib_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ENO1 enolase 1, (alpha) 0.153804
MYH9 myosin, heavy chain 9, non-muscle 0.141381
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.133044
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.132988
CANX calnexin 0.107856
CALR calreticulin 0.103803
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.100638
LDHA lactate dehydrogenase A 0.0988484
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0961703
EXT1 exostosin glycosyltransferase 1 0.0877373
CD44 CD44 molecule (Indian blood group) 0.0852736
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0778684
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0738918
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0736626
ASPH aspartate beta-hydroxylase 0.0603802
APP amyloid beta (A4) precursor protein 0.0589759
SP100 SP100 nuclear antigen 0.0553148
EEF2 eukaryotic translation elongation factor 2 0.0496242
LOC112694756 uncharaterized LOC112694756 0.0493659
ALCAM activated leukocyte cell adhesion molecule 0.0492494
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0490969
SOD2 superoxide dismutase 2, mitochondrial 0.048601
B2M beta-2-microglobulin 0.0477404
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0470161
ZBTB38 zinc finger and BTB domain containing 38 0.046359
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0461716
VIM vimentin 0.0460474
NFE2L2 nuclear factor, erythroid 2-like 2 0.0457684
MSN moesin 0.0455085
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0436086
VEGFA vascular endothelial growth factor A 0.0430416
FTH1 ferritin, heavy polypeptide 1 0.042869
EIF1 eukaryotic translation initiation factor 1 0.0419464
HSPA8 heat shock 70kDa protein 8 0.0418743
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0413912
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0406697
KIAA1217 KIAA1217 0.0386032
NKAIN3 Na+/K+ transporting ATPase interacting 3 0.0383726
TMSB4X thymosin beta 4, X-linked 0.0382227
DSTN destrin (actin depolymerizing factor) 0.0380946
LOC102724023 ES1 protein homolog, mitochondrial 0.0375735
WWTR1 WW domain containing transcription regulator 1 0.0371776
MACF1 microtubule-actin crosslinking factor 1 0.0369745
PTMA prothymosin, alpha 0.0362413
ZSWIM6 zinc finger, SWIM-type containing 6 0.0360834
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0351306
MBNL1 muscleblind-like splicing regulator 1 0.0351164
DST dystonin 0.0347812
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0346094
RPL7 ribosomal protein L7 0.0320148
ARRDC3 arrestin domain containing 3 0.0317266
NFE2L1 nuclear factor, erythroid 2-like 1 0.0295717
PDIA6 protein disulfide isomerase family A, member 6 0.0294928
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0293142
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0292881
FAT1 FAT atypical cadherin 1 0.029132
CALU calumenin 0.0289288
VCL vinculin 0.0288943
HYOU1 hypoxia up-regulated 1 0.0288471
EIF4A2 eukaryotic translation initiation factor 4A2 0.0286976
PLSCR1 phospholipid scramblase 1 0.0282006
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0281992
GOLGB1 golgin B1 0.027847
ATXN1 ataxin 1 0.0275594
IGFBP3 insulin-like growth factor binding protein 3 0.0273082
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0271999
PDLIM5 PDZ and LIM domain 5 0.0265431
STC2 stanniocalcin 2 0.0263501
KTN1 kinectin 1 (kinesin receptor) 0.0262134
CLTC clathrin, heavy chain (Hc) 0.0253768
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0253722
FAM107B family with sequence similarity 107, member B 0.0250534
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0250364
CXCL8 chemokine (C-X-C motif) ligand 8 0.0249696
HDAC9 histone deacetylase 9 0.024861
DSPP dentin sialophosphoprotein 0.0247911
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0245268
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0237873
HLA-E major histocompatibility complex, class I, E 0.0236518
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0232552
AKAP9 A kinase (PRKA) anchor protein 9 0.0230275
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0229664
IFI44L interferon-induced protein 44-like 0.0229443
SVIL supervillin 0.02284
RPS6 ribosomal protein S6 0.0228098
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0227192
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0227026
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.022589
PDIA3 protein disulfide isomerase family A, member 3 0.0224153
RPS12 ribosomal protein S12 0.0222254
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0220787
TMF1 TATA element modulatory factor 1 0.021995
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0215857
PDIA4 protein disulfide isomerase family A, member 4 0.020904
SAMD9 sterile alpha motif domain containing 9 0.0208593
CSF1 colony stimulating factor 1 (macrophage) 0.0207784
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0205271
LPP LIM domain containing preferred translocation partner in lipoma 0.0204468
LNPEP leucyl/cystinyl aminopeptidase 0.020333
COL3A1 collagen, type III, alpha 1 0.0201877

decreased expression

Symbol Name Standardized Value
COL1A1 collagen, type I, alpha 1 -0.287414
NDRG1 N-myc downstream regulated 1 -0.264429
COL1A2 collagen, type I, alpha 2 -0.135893
TIMP3 TIMP metallopeptidase inhibitor 3 -0.115548
ATP13A3 ATPase type 13A3 -0.0941628
PDE10A phosphodiesterase 10A -0.0682291
TRIO trio Rho guanine nucleotide exchange factor -0.0665915
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0553272
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.051049
COL5A1 collagen, type V, alpha 1 -0.0500347
TGFBI transforming growth factor, beta-induced, 68kDa -0.0497463
COL6A3 collagen, type VI, alpha 3 -0.0491223
TMEM165 transmembrane protein 165 -0.0489507
CDH13 cadherin 13 -0.0477741
COL7A1 collagen, type VII, alpha 1 -0.0458885
COL6A1 collagen, type VI, alpha 1 -0.0451501
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0433777
FTL ferritin, light polypeptide -0.0426575
CADM1 cell adhesion molecule 1 -0.0404948
TMSB10 thymosin beta 10 -0.0402794
RTN4 reticulon 4 -0.0364212
ZNF292 zinc finger protein 292 -0.0360944
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0360636
LOX lysyl oxidase -0.0343153
MRPS6 mitochondrial ribosomal protein S6 -0.0338416
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0336252
DPYD dihydropyrimidine dehydrogenase -0.0335936
ACTG1 actin gamma 1 -0.0330651
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0326011
MT2A metallothionein 2A -0.0322989
TSC22D2 TSC22 domain family, member 2 -0.0322724
TFG TRK-fused gene -0.0322502
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0314895
ABI3BP ABI family, member 3 (NESH) binding protein -0.0313912
ELL2 elongation factor, RNA polymerase II, 2 -0.0309546
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0308195
RAB1A RAB1A, member RAS oncogene family -0.0291165
TPM2 tropomyosin 2 (beta) -0.0289236
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0283201
EGR1 early growth response 1 -0.0282561
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0280542
KMT2E lysine (K)-specific methyltransferase 2E -0.0279347
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0277717
TRPS1 trichorhinophalangeal syndrome I -0.0276152
TMEM263 transmembrane protein 263 -0.0272853
SPAG9 sperm associated antigen 9 -0.0272489
USP3 ubiquitin specific peptidase 3 -0.0267962
TRAM1 translocation associated membrane protein 1 -0.0267333
CALD1 caldesmon 1 -0.0263079
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0262385
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0257266
PRR16 proline rich 16 -0.0255625
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0254506
QKI QKI, KH domain containing, RNA binding -0.0254052
ADM adrenomedullin -0.0249667
KDM3A lysine (K)-specific demethylase 3A -0.0248463
RPL35A ribosomal protein L35a -0.0246558
HSPG2 heparan sulfate proteoglycan 2 -0.0245773
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0245521
F3 coagulation factor III (thromboplastin, tissue factor) -0.0241105
ANKRD11 ankyrin repeat domain 11 -0.023886
RRBP1 ribosome binding protein 1 -0.0238389
WSB1 WD repeat and SOCS box containing 1 -0.0234724
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0230465
HMGA1 high mobility group AT-hook 1 -0.0225858
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0225262
FKBP10 FK506 binding protein 10, 65 kDa -0.0224849
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0223767
HMGA2 high mobility group AT-hook 2 -0.0211308
UGCG UDP-glucose ceramide glucosyltransferase -0.0210456
PDE8A phosphodiesterase 8A -0.0206204
BBX bobby sox homolog (Drosophila) -0.0205717
ZFPM2 zinc finger protein, FOG family member 2 -0.0204998
RBM39 RNA binding motif protein 39 -0.0198792
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0198725
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0197381
SBF2 SET binding factor 2 -0.0196813
CAMTA1 calmodulin binding transcription activator 1 -0.0195752
TRAM2 translocation associated membrane protein 2 -0.0195502
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0193831
AFAP1 actin filament associated protein 1 -0.0193654
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0191087
RPL28 ribosomal protein L28 -0.0189889
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0188059
AFF4 AF4/FMR2 family, member 4 -0.0186848
KDM4B lysine (K)-specific demethylase 4B -0.018681
RHEB Ras homolog enriched in brain -0.0184441
NPEPPS aminopeptidase puromycin sensitive -0.0183426
EHD2 EH-domain containing 2 -0.0182365
KIF13A kinesin family member 13A -0.0179833
GNAS GNAS complex locus -0.0179069
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0178282
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0177898
FBXO32 F-box protein 32 -0.0177702
AZIN1 antizyme inhibitor 1 -0.0177465
SETD5 SET domain containing 5 -0.0177065
RAB6A RAB6A, member RAS oncogene family -0.0176925
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0175347
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0174446
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0172426