Pralsetinib_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.161697
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.143616
DSPP dentin sialophosphoprotein 0.115301
LMO7 LIM domain 7 0.105273
MYOF myoferlin 0.099911
LOC102724023 ES1 protein homolog, mitochondrial 0.0904752
MYH9 myosin, heavy chain 9, non-muscle 0.0898636
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0732683
MACC1 metastasis associated in colon cancer 1 0.0690994
GDA guanine deaminase 0.0679612
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.061709
SPTBN1 spectrin, beta, non-erythrocytic 1 0.057753
PTPRK protein tyrosine phosphatase, receptor type, K 0.0544193
MBNL2 muscleblind-like splicing regulator 2 0.0502454
DSTN destrin (actin depolymerizing factor) 0.0477677
EXT1 exostosin glycosyltransferase 1 0.0469449
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0458471
RPS12 ribosomal protein S12 0.0404406
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0391983
LOC112694756 uncharaterized LOC112694756 0.0388865
TMC5 transmembrane channel-like 5 0.0388384
HSPA8 heat shock 70kDa protein 8 0.0383356
SMAD3 SMAD family member 3 0.0374889
ADGRF1 adhesion G protein-coupled receptor F1 0.0370405
MGAM2 maltase-glucoamylase 2 (putative) 0.0370247
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.036546
TOP2A topoisomerase (DNA) II alpha 170kDa 0.033632
NCEH1 neutral cholesterol ester hydrolase 1 0.0336016
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0333373
ENO1 enolase 1, (alpha) 0.0329774
KLF5 Kruppel-like factor 5 (intestinal) 0.0326368
GOLGB1 golgin B1 0.0301183
AKAP13 A kinase (PRKA) anchor protein 13 0.0298571
TXNRD1 thioredoxin reductase 1 0.0291588
SET SET nuclear proto-oncogene 0.0291081
NFE2L2 nuclear factor, erythroid 2-like 2 0.0289469
B2M beta-2-microglobulin 0.0289051
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.02838
SOS1 son of sevenless homolog 1 (Drosophila) 0.0283073
DST dystonin 0.0281984
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0280418
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0269839
CANX calnexin 0.0269642
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.0269056
PCBP2 poly(rC) binding protein 2 0.0268026
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0265442
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 0.0256164
AKAP9 A kinase (PRKA) anchor protein 9 0.0255685
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0247552
SH3RF1 SH3 domain containing ring finger 1 0.0246923
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0245072
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0244735
APLP2 amyloid beta (A4) precursor-like protein 2 0.0244213
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0244165
TUG1 taurine up-regulated 1 (non-protein coding) 0.023969
LURAP1L leucine rich adaptor protein 1-like 0.0239082
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0238665
FNIP1 folliculin interacting protein 1 0.0236229
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0230879
RBM47 RNA binding motif protein 47 0.022788
RPS3 ribosomal protein S3 0.0226995
TMF1 TATA element modulatory factor 1 0.0222924
HYOU1 hypoxia up-regulated 1 0.0219367
GCLC glutamate-cysteine ligase, catalytic subunit 0.0215488
FTH1 ferritin, heavy polypeptide 1 0.0214261
TJP1 tight junction protein 1 0.0211024
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0209644
MB21D2 Mab-21 domain containing 2 0.0207887
CEMIP2 cell migration inducing hyaluronidase 2 0.0206653
CLMN calmin (calponin-like, transmembrane) 0.0201718
AHR aryl hydrocarbon receptor 0.0200581
FXR1 fragile X mental retardation, autosomal homolog 1 0.0196314
ITGB8 integrin, beta 8 0.0193709
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0193457
LCN2 lipocalin 2 0.0190889
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0190778
CENPF centromere protein F, 350/400kDa 0.0189163
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0187259
SIK3 SIK family kinase 3 0.0184984
CLTC clathrin, heavy chain (Hc) 0.0181423
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0180687
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0177971
NTN4 netrin 4 0.0175514
ALCAM activated leukocyte cell adhesion molecule 0.0174694
AGR3 anterior gradient 3 0.0172703
COPG1 coatomer protein complex, subunit gamma 1 0.0172468
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 0.0172353
HDAC9 histone deacetylase 9 0.017072
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) 0.0169491
MT2A metallothionein 2A 0.0169365
COBL cordon-bleu WH2 repeat protein 0.0168738
EIF4H eukaryotic translation initiation factor 4H 0.0165924
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0165148
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0164818
EEF2 eukaryotic translation elongation factor 2 0.0164362
EGFR epidermal growth factor receptor 0.0164083
PCM1 pericentriolar material 1 0.0162304
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0160353
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0159003
HMGB2 high mobility group box 2 0.0158773

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.327737
MAML2 mastermind-like 2 (Drosophila) -0.166827
EMP1 epithelial membrane protein 1 -0.123971
GMDS GDP-mannose 4,6-dehydratase -0.119624
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.112028
TMSB10 thymosin beta 10 -0.111066
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0927708
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0924969
FLNB filamin B, beta -0.0856039
S100A6 S100 calcium binding protein A6 -0.0828509
ANXA2 annexin A2 -0.0823335
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0819596
TPT1 tumor protein, translationally-controlled 1 -0.0781671
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0769028
S100A10 S100 calcium binding protein A10 -0.0690186
EHBP1 EH domain binding protein 1 -0.0606542
BCL2L1 BCL2-like 1 -0.0557452
TNIK TRAF2 and NCK interacting kinase -0.055183
AGR2 anterior gradient 2 -0.0550887
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0550756
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.05284
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0510657
ITGA6 integrin, alpha 6 -0.0504725
PDIA3 protein disulfide isomerase family A, member 3 -0.0492729
PTMA prothymosin, alpha -0.0490581
CD46 CD46 molecule, complement regulatory protein -0.0474044
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0473216
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0467718
ACTN4 actinin, alpha 4 -0.0459845
CEMIP cell migration inducing protein, hyaluronan binding -0.0450424
KRT7 keratin 7, type II -0.0444224
TMEM123 transmembrane protein 123 -0.0438631
KRT8 keratin 8, type II -0.0436329
C6ORF132 chromosome 6 open reading frame 132 -0.0426268
TPM4 tropomyosin 4 -0.0411215
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0406759
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0396706
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.039104
HLA-A major histocompatibility complex, class I, A -0.0385942
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0385304
GNAS GNAS complex locus -0.0382794
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0372265
WARS1 tryptophanyl-tRNA synthetase 1 -0.0370131
AUTS2 autism susceptibility candidate 2 -0.0368967
CCND1 cyclin D1 -0.036229
INSIG1 insulin induced gene 1 -0.0361795
RPL35A ribosomal protein L35a -0.0359113
ITGB4 integrin, beta 4 -0.0358755
ANKRD11 ankyrin repeat domain 11 -0.0350968
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0348809
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0348477
TFRC transferrin receptor -0.0347289
PRKCA protein kinase C, alpha -0.0346198
MSI2 musashi RNA-binding protein 2 -0.0345061
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0344036
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0341089
SLC38A1 solute carrier family 38, member 1 -0.033778
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0337445
ACACA acetyl-CoA carboxylase alpha -0.0332678
TRPS1 trichorhinophalangeal syndrome I -0.0327377
ZMYND8 zinc finger, MYND-type containing 8 -0.0327254
DENND1A DENN/MADD domain containing 1A -0.0327162
LLGL2 lethal giant larvae homolog 2 (Drosophila) -0.0319555
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0315981
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0314847
KLK10 kallikrein-related peptidase 10 -0.0313679
FDPS farnesyl diphosphate synthase -0.0313114
SHB Src homology 2 domain containing adaptor protein B -0.031277
TMBIM1 transmembrane BAX inhibitor motif containing 1 -0.0312009
ZFP36L2 ZFP36 ring finger protein-like 2 -0.0309693
DLG1 discs, large homolog 1 (Drosophila) -0.0307783
KPNB1 karyopherin (importin) beta 1 -0.0306045
PKM pyruvate kinase, muscle -0.0304833
IARS1 isoleucyl-tRNA synthetase 1 -0.0303588
WDR45B WD repeat domain 45B -0.0303445
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0302224
RAB1A RAB1A, member RAS oncogene family -0.0300367
GPX2 glutathione peroxidase 2 -0.0299228
RPS24 ribosomal protein S24 -0.029801
TMPRSS4 transmembrane protease, serine 4 -0.0296935
RPL23 ribosomal protein L23 -0.0296764
HLA-B major histocompatibility complex, class I, B -0.0296706
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0294265
TMCC1 transmembrane and coiled-coil domain family 1 -0.0289257
EGR1 early growth response 1 -0.0287802
TES testin LIM domain protein -0.0285059
MYL12B myosin, light chain 12B, regulatory -0.0281079
FBXO11 F-box protein 11 -0.027937
RRBP1 ribosome binding protein 1 -0.0278852
RPL34 ribosomal protein L34 -0.027107
HLA-C major histocompatibility complex, class I, C -0.0270822
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0270659
ONECUT3 one cut homeobox 3 -0.0268741
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0268107
FOXN2 forkhead box N2 -0.026332
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0262951
FASN fatty acid synthase -0.0260053
ARHGAP6 Rho GTPase activating protein 6 -0.0259559
ANO1 anoctamin 1, calcium activated chloride channel -0.0258764
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0256775