Pralsetinib_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.165473
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.156722
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.136043
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.125448
LMO7 LIM domain 7 0.123798
EXT1 exostosin glycosyltransferase 1 0.109057
DSPP dentin sialophosphoprotein 0.0907813
MYO1E myosin IE 0.0903476
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0866942
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0865492
LOC102724023 ES1 protein homolog, mitochondrial 0.0822356
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0734056
MUC13 mucin 13, cell surface associated 0.0712386
HSPA8 heat shock 70kDa protein 8 0.0706538
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0678338
TTC3 tetratricopeptide repeat domain 3 0.0660393
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0631721
CANX calnexin 0.0592106
LDHA lactate dehydrogenase A 0.05724
RPS12 ribosomal protein S12 0.057016
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0561934
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0555348
MBNL1 muscleblind-like splicing regulator 1 0.0554084
PDZD8 PDZ domain containing 8 0.054712
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0515752
EIF1 eukaryotic translation initiation factor 1 0.0481646
CALR calreticulin 0.0480166
FAT1 FAT atypical cadherin 1 0.0470499
PTPRK protein tyrosine phosphatase, receptor type, K 0.046973
APP amyloid beta (A4) precursor protein 0.0467181
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0444881
ALCAM activated leukocyte cell adhesion molecule 0.044041
KLF5 Kruppel-like factor 5 (intestinal) 0.0434126
SVIL supervillin 0.0426941
NCOA7 nuclear receptor coactivator 7 0.0413203
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0411322
LOC112694756 uncharaterized LOC112694756 0.0402891
LURAP1L leucine rich adaptor protein 1-like 0.0399276
CEMIP2 cell migration inducing hyaluronidase 2 0.0399132
RPLP0 ribosomal protein, large, P0 0.0398185
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0380871
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0378739
PELI1 pellino E3 ubiquitin protein ligase 1 0.0376305
MYO5B myosin VB 0.0374873
B2M beta-2-microglobulin 0.0370156
MYH9 myosin, heavy chain 9, non-muscle 0.0368017
ENO1 enolase 1, (alpha) 0.0366822
ERRFI1 ERBB receptor feedback inhibitor 1 0.0366458
PDLIM5 PDZ and LIM domain 5 0.0356716
ZSWIM6 zinc finger, SWIM-type containing 6 0.035644
AFF1 AF4/FMR2 family, member 1 0.0354674
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0353225
ARHGAP42 Rho GTPase activating protein 42 0.0352206
TPT1 tumor protein, translationally-controlled 1 0.0347077
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0345683
TGFBR3 transforming growth factor, beta receptor III 0.0337935
NEBL nebulette 0.0331
PARD3B par-3 family cell polarity regulator beta 0.0329036
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0324335
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0322971
PIGR polymeric immunoglobulin receptor 0.0319332
SLC38A2 solute carrier family 38, member 2 0.0310528
TRPS1 trichorhinophalangeal syndrome I 0.0309853
EIF4A2 eukaryotic translation initiation factor 4A2 0.0309474
SOX9 SRY (sex determining region Y)-box 9 0.0308434
BZW1 basic leucine zipper and W2 domains 1 0.0305866
DSTN destrin (actin depolymerizing factor) 0.0293745
SQSTM1 sequestosome 1 0.0293666
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0290082
LPP LIM domain containing preferred translocation partner in lipoma 0.0285912
SIK3 SIK family kinase 3 0.0283342
PCSK5 proprotein convertase subtilisin/kexin type 5 0.028091
MED13 mediator complex subunit 13 0.0273909
POF1B premature ovarian failure, 1B 0.0273192
ANXA1 annexin A1 0.0271289
FTL ferritin, light polypeptide 0.0269095
AHNAK AHNAK nucleoprotein 0.0268839
SMAD2 SMAD family member 2 0.0268675
ETV6 ets variant 6 0.0265376
SPATS2L spermatogenesis associated, serine-rich 2-like 0.026465
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0262831
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0262285
PGK1 phosphoglycerate kinase 1 0.0261674
RND3 Rho family GTPase 3 0.0260278
ATF3 activating transcription factor 3 0.0259422
UNC13B unc-13 homolog B (C. elegans) 0.0258964
NFE2L2 nuclear factor, erythroid 2-like 2 0.025775
TJP1 tight junction protein 1 0.0257509
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0257035
USP9X ubiquitin specific peptidase 9, X-linked 0.025585
EPCAM epithelial cell adhesion molecule 0.0255801
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0255315
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0254187
CRY1 cryptochrome circadian clock 1 0.0249561
DUSP16 dual specificity phosphatase 16 0.0249311
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0248946
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0248315
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0248046
EPS8 epidermal growth factor receptor pathway substrate 8 0.0247856
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0244794

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.200297
TNS4 tensin 4 -0.163845
MUC6 mucin 6, oligomeric mucus/gel-forming -0.15746
TMSB10 thymosin beta 10 -0.123234
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.111106
ANXA2 annexin A2 -0.102178
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.100823
FLNB filamin B, beta -0.0945676
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.093748
RNF43 ring finger protein 43 -0.0827365
NDRG1 N-myc downstream regulated 1 -0.0777546
ACTN4 actinin, alpha 4 -0.0727688
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0719858
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0714774
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0677305
CALB1 calbindin 1, 28kDa -0.0589714
ONECUT3 one cut homeobox 3 -0.055489
GREB1L growth regulation by estrogen in breast cancer-like -0.0527884
HMGA1 high mobility group AT-hook 1 -0.0525429
ITGB4 integrin, beta 4 -0.0522264
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0520021
FERMT1 fermitin family member 1 -0.051781
CD46 CD46 molecule, complement regulatory protein -0.0495162
PKM pyruvate kinase, muscle -0.0493026
PRSS3 protease, serine, 3 -0.0484146
PPARG peroxisome proliferator-activated receptor gamma -0.0480132
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0460675
ANTXR2 anthrax toxin receptor 2 -0.0455878
RREB1 ras responsive element binding protein 1 -0.045079
BIRC6 baculoviral IAP repeat containing 6 -0.0446182
KRT8 keratin 8, type II -0.0439396
KLF3 Kruppel-like factor 3 (basic) -0.0430251
MUC5B mucin 5B, oligomeric mucus/gel-forming -0.042681
SBF2 SET binding factor 2 -0.0421282
ESYT2 extended synaptotagmin-like protein 2 -0.0417068
POTEF POTE ankyrin domain family, member F -0.041413
ITGA6 integrin, alpha 6 -0.0410588
BCL2L1 BCL2-like 1 -0.0408636
GPHN gephyrin -0.040311
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0403075
RPL35A ribosomal protein L35a -0.040259
MAML2 mastermind-like 2 (Drosophila) -0.0401693
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0391617
CEMIP cell migration inducing protein, hyaluronan binding -0.0385709
KDM7A lysine (K)-specific demethylase 7A -0.03822
RAP1B RAP1B, member of RAS oncogene family -0.0375311
ABHD2 abhydrolase domain containing 2 -0.0375044
NALF1 NALCN channel auxiliary factor 1 -0.0372955
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0367491
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0364651
S100A6 S100 calcium binding protein A6 -0.0364331
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0356817
FOSL1 FOS-like antigen 1 -0.0354632
PLAUR plasminogen activator, urokinase receptor -0.0350364
PNISR PNN-interacting serine/arginine-rich protein -0.0350267
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0348635
GOLGA4 golgin A4 -0.0342097
SETD5 SET domain containing 5 -0.0340174
MUC17 mucin 17, cell surface associated -0.0336957
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0330931
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0327065
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0326532
RBM25 RNA binding motif protein 25 -0.0319753
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0318513
MAP4 microtubule-associated protein 4 -0.0317358
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0316975
EPHA2 EPH receptor A2 -0.0316628
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma -0.0314421
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0310472
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0310175
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 -0.0309724
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0305888
ESRP1 epithelial splicing regulatory protein 1 -0.0303839
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0303652
GCC2 GRIP and coiled-coil domain containing 2 -0.0300249
TPM4 tropomyosin 4 -0.0298885
JUP junction plakoglobin -0.0296116
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor -0.029546
STRN3 striatin, calmodulin binding protein 3 -0.0292433
NCOR1 nuclear receptor corepressor 1 -0.0291598
PRELID2 PRELI domain containing 2 -0.0286371
TMEM45B transmembrane protein 45B -0.0280471
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0279367
ETNK1 ethanolamine kinase 1 -0.0278344
PCDHB16 protocadherin beta 16 -0.027723
PTPRE protein tyrosine phosphatase, receptor type, E -0.0273063
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0272534
ZFAND3 zinc finger, AN1-type domain 3 -0.0271145
RPL23 ribosomal protein L23 -0.0264162
EGR1 early growth response 1 -0.0263684
MON2 MON2 homolog (S. cerevisiae) -0.0263437
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0263411
AVL9 AVL9 homolog (S. cerevisiase) -0.0263009
THOC2 THO complex 2 -0.0262882
PTMA prothymosin, alpha -0.0262803
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.0262109
CDCP1 CUB domain containing protein 1 -0.0261005
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0253719
VMP1 vacuole membrane protein 1 -0.0252689
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0252183