Pralsetinib_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.155231
IGFBP3 insulin-like growth factor binding protein 3 0.117398
FTH1 ferritin, heavy polypeptide 1 0.103631
PDE4D phosphodiesterase 4D, cAMP-specific 0.101669
FNDC3B fibronectin type III domain containing 3B 0.0899237
SAMD4A sterile alpha motif domain containing 4A 0.0859245
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0858858
BASP1 brain abundant, membrane attached signal protein 1 0.0834705
AKAP12 A kinase (PRKA) anchor protein 12 0.0820167
EIF1 eukaryotic translation initiation factor 1 0.079907
ARHGAP26 Rho GTPase activating protein 26 0.0723348
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0719152
ZSWIM6 zinc finger, SWIM-type containing 6 0.0710898
SOD2 superoxide dismutase 2, mitochondrial 0.0709861
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0688382
FAM107B family with sequence similarity 107, member B 0.0651123
SMOC1 SPARC related modular calcium binding 1 0.0622614
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0611779
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0604278
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0582489
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0550362
GLS2 glutaminase 2 (liver, mitochondrial) 0.053655
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0525405
MSN moesin 0.0491437
HLA-B major histocompatibility complex, class I, B 0.0490278
KTN1 kinectin 1 (kinesin receptor) 0.0487764
LDHA lactate dehydrogenase A 0.0480843
MYH9 myosin, heavy chain 9, non-muscle 0.0478274
RUNX1 runt-related transcription factor 1 0.0476368
ATXN1 ataxin 1 0.0467707
PYGL phosphorylase, glycogen, liver 0.0460439
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.045796
MYOF myoferlin 0.0455273
RPS6 ribosomal protein S6 0.0453969
B2M beta-2-microglobulin 0.0453329
LOC102724023 ES1 protein homolog, mitochondrial 0.044225
NDRG1 N-myc downstream regulated 1 0.0436784
MYO1E myosin IE 0.0426398
PTPRJ protein tyrosine phosphatase, receptor type, J 0.040486
ELL2 elongation factor, RNA polymerase II, 2 0.0403337
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.03808
EXT1 exostosin glycosyltransferase 1 0.0380345
GOLGA4 golgin A4 0.0377664
DOCK4 dedicator of cytokinesis 4 0.0372522
HLA-A major histocompatibility complex, class I, A 0.0372485
LGALS1 lectin, galactoside-binding, soluble, 1 0.0363012
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0361444
LAMC2 laminin, gamma 2 0.0360571
ANGPTL4 angiopoietin-like 4 0.0354674
GOLGB1 golgin B1 0.0351798
TPI1 triosephosphate isomerase 1 0.0349107
EPAS1 endothelial PAS domain protein 1 0.0345999
C15ORF48 chromosome 15 open reading frame 48 0.0345386
MACF1 microtubule-actin crosslinking factor 1 0.0343232
EGFR epidermal growth factor receptor 0.0338591
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0337607
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0332663
CCL5 chemokine (C-C motif) ligand 5 0.032961
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0327535
RPLP0 ribosomal protein, large, P0 0.0323753
PDE10A phosphodiesterase 10A 0.0319128
MED13 mediator complex subunit 13 0.0316436
MORF4L2 mortality factor 4 like 2 0.0312601
NFE2L2 nuclear factor, erythroid 2-like 2 0.03122
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0311845
LPP LIM domain containing preferred translocation partner in lipoma 0.031046
LOC112694756 uncharaterized LOC112694756 0.0306998
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0305091
ALCAM activated leukocyte cell adhesion molecule 0.0301947
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0301683
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0295554
WAC WW domain containing adaptor with coiled-coil 0.0294449
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.028031
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0280001
EFNA1 ephrin-A1 0.027811
GRB10 growth factor receptor-bound protein 10 0.0277986
FMNL2 formin-like 2 0.027732
STC2 stanniocalcin 2 0.0273422
COPA coatomer protein complex, subunit alpha 0.0271715
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.027041
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0269769
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0266428
IL6 interleukin 6 0.0265085
BZW2 basic leucine zipper and W2 domains 2 0.0262242
IRAK2 interleukin-1 receptor-associated kinase 2 0.0260585
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0259539
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0254991
CYTH1 cytohesin 1 0.025443
RAB7A RAB7A, member RAS oncogene family 0.0253533
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.025198
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0249024
PRRC2C proline-rich coiled-coil 2C 0.024874
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0248078
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0247802
PSEN1 presenilin 1 0.0245064
RPS12 ribosomal protein S12 0.0244625
INTS6 integrator complex subunit 6 0.0242671
NF1 neurofibromin 1 0.0240722
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0239475
DOCK5 dedicator of cytokinesis 5 0.0239071

decreased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 -0.227549
GRAMD1B GRAM domain containing 1B -0.20333
TM4SF1 transmembrane 4 L six family member 1 -0.117037
TMSB10 thymosin beta 10 -0.103749
SLC38A2 solute carrier family 38, member 2 -0.0933055
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0733301
FGB fibrinogen beta chain -0.07175
TFPI2 tissue factor pathway inhibitor 2 -0.069744
RTN4 reticulon 4 -0.0692366
RPS27A ribosomal protein S27a -0.0674443
IGF2 insulin-like growth factor 2 -0.0674362
BICC1 BicC family RNA binding protein 1 -0.0664612
HDAC9 histone deacetylase 9 -0.063665
FTL ferritin, light polypeptide -0.0624127
RPL23 ribosomal protein L23 -0.0622925
WDR43 WD repeat domain 43 -0.0594088
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0578859
ERBIN erbb2 interacting protein -0.0567661
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0547282
NRG1 neuregulin 1 -0.0541872
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0504304
RAD21 RAD21 homolog (S. pombe) -0.0502441
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0488743
ANKRD28 ankyrin repeat domain 28 -0.0481395
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0465343
PKM pyruvate kinase, muscle -0.0462269
UBC ubiquitin C -0.0450136
ECT2 epithelial cell transforming 2 -0.0446316
YBX3 Y box binding protein 3 -0.0445307
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0438234
RHEB Ras homolog enriched in brain -0.0432477
USP3 ubiquitin specific peptidase 3 -0.0431195
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0422442
MKI67 marker of proliferation Ki-67 -0.0420705
PTMA prothymosin, alpha -0.0415759
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0408079
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0401335
EEF2 eukaryotic translation elongation factor 2 -0.0399392
THBS1 thrombospondin 1 -0.0399099
ANLN anillin, actin binding protein -0.0397887
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0387262
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0386852
ADGRG6 adhesion G protein-coupled receptor G6 -0.0383592
PAWR PRKC, apoptosis, WT1, regulator -0.0379525
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.03787
CYRIB CYFIP related Rac1 interactor B -0.0361173
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0346075
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0345235
RFWD3 ring finger and WD repeat domain 3 -0.0344458
YBX1 Y box binding protein 1 -0.033821
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0331708
KLF6 Kruppel-like factor 6 -0.0328168
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 -0.0326897
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0323639
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0323106
ATP5F1B ATP synthase F1 subunit beta -0.0321334
CHN1 chimerin 1 -0.0310612
FGG fibrinogen gamma chain -0.0306576
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0304564
TNPO1 transportin 1 -0.0303078
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0303027
BABAM2 BRISC and BRCA1 A complex member 2 -0.0302517
ACACA acetyl-CoA carboxylase alpha -0.030225
CENPF centromere protein F, 350/400kDa -0.0302083
MORF4L1 mortality factor 4 like 1 -0.0298377
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0297192
EFNA5 ephrin-A5 -0.0296389
MBNL1 muscleblind-like splicing regulator 1 -0.0294275
LAMB1 laminin, beta 1 -0.0293084
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0287433
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) -0.0287222
RPS4Y1 ribosomal protein S4, Y-linked 1 -0.0287165
SRGN serglycin -0.0284195
RPS21 ribosomal protein S21 -0.0282645
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.028259
RASAL2 RAS protein activator like 2 -0.028215
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0279962
TPX2 TPX2, microtubule-associated -0.0278435
TMEM123 transmembrane protein 123 -0.0276423
AHR aryl hydrocarbon receptor -0.0270384
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0269453
RPS29 ribosomal protein S29 -0.0268173
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0263383
RHOA ras homolog family member A -0.0262774
ZNF292 zinc finger protein 292 -0.0258577
NEGR1 neuronal growth regulator 1 -0.0257846
WTAP Wilms tumor 1 associated protein -0.0257288
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0257133
AHNAK AHNAK nucleoprotein -0.0256103
AK1 adenylate kinase 1 -0.0255245
ZNF804A zinc finger protein 804A -0.0253859
TPD52 tumor protein D52 -0.0251774
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0250264
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0248842
NUSAP1 nucleolar and spindle associated protein 1 -0.0247671
MYL12B myosin, light chain 12B, regulatory -0.0245553
ZFAND6 zinc finger, AN1-type domain 6 -0.0243451
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0242742
VMP1 vacuole membrane protein 1 -0.0241217
EIF5B eukaryotic translation initiation factor 5B -0.0239904