Pralsetinib_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.265367
AKAP12 A kinase (PRKA) anchor protein 12 0.251241
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0786696
MYH9 myosin, heavy chain 9, non-muscle 0.0733512
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0679594
KTN1 kinectin 1 (kinesin receptor) 0.0619006
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0600911
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0593656
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.058663
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0585121
ENO1 enolase 1, (alpha) 0.0578569
EEF2 eukaryotic translation elongation factor 2 0.0562355
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0557503
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0555056
TPM3 tropomyosin 3 0.0537349
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0535052
RPS12 ribosomal protein S12 0.0490449
GOLGB1 golgin B1 0.0484127
PABPC1 poly(A) binding protein, cytoplasmic 1 0.048206
TXNRD1 thioredoxin reductase 1 0.0480075
NFE2L2 nuclear factor, erythroid 2-like 2 0.0464592
CANX calnexin 0.0459721
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0455615
HSPA8 heat shock 70kDa protein 8 0.0452102
ELL2 elongation factor, RNA polymerase II, 2 0.0452013
ERRFI1 ERBB receptor feedback inhibitor 1 0.045081
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0450492
HOMER1 homer scaffolding protein 1 0.0435785
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0434531
INTS6 integrator complex subunit 6 0.0422774
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0419705
ASPH aspartate beta-hydroxylase 0.0416285
DST dystonin 0.0415959
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0406626
MSN moesin 0.0400986
SET SET nuclear proto-oncogene 0.0396454
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0394151
ZSWIM6 zinc finger, SWIM-type containing 6 0.0393249
RPL4 ribosomal protein L4 0.0391219
IPO7 importin 7 0.0378219
DSPP dentin sialophosphoprotein 0.0364148
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0362293
BZW1 basic leucine zipper and W2 domains 1 0.0354714
TPI1 triosephosphate isomerase 1 0.0352442
PDLIM5 PDZ and LIM domain 5 0.0347196
RPS3 ribosomal protein S3 0.0343839
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0342671
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0323082
RPL3 ribosomal protein L3 0.0319832
JMJD1C jumonji domain containing 1C 0.0311783
WNK1 WNK lysine deficient protein kinase 1 0.0311255
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0307867
CLTC clathrin, heavy chain (Hc) 0.030471
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0294458
PCBP2 poly(rC) binding protein 2 0.0291181
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0290725
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0287688
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0287149
RPLP0 ribosomal protein, large, P0 0.0281485
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0279566
AKAP9 A kinase (PRKA) anchor protein 9 0.0276896
ZNFX1 zinc finger, NFX1-type containing 1 0.0271261
LOC112694756 uncharaterized LOC112694756 0.0270263
TLN1 talin 1 0.026887
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0265669
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0264635
SPAG9 sperm associated antigen 9 0.026432
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0263242
PTMA prothymosin, alpha 0.025824
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0253845
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0252075
DOCK5 dedicator of cytokinesis 5 0.0251846
WNT2B wingless-type MMTV integration site family, member 2B 0.0250257
C6ORF62 chromosome 6 open reading frame 62 0.0248342
SNAP25 synaptosomal-associated protein, 25kDa 0.0243432
GDI2 GDP dissociation inhibitor 2 0.0241045
RACK1 receptor for activated C kinase 1 0.0241006
ADAR adenosine deaminase, RNA-specific 0.024028
RPS4X ribosomal protein S4, X-linked 0.0238711
EIF5 eukaryotic translation initiation factor 5 0.0235931
RPS18 ribosomal protein S18 0.0235182
SFPQ splicing factor proline/glutamine-rich 0.0233553
RPS7 ribosomal protein S7 0.0229953
KRT18 keratin 18, type I 0.0229927
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.022816
BRD2 bromodomain containing 2 0.0227953
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0224576
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0222726
TTC3 tetratricopeptide repeat domain 3 0.022201
MACF1 microtubule-actin crosslinking factor 1 0.022093
PDIA6 protein disulfide isomerase family A, member 6 0.0220638
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0220503
MCL1 myeloid cell leukemia 1 0.0219287
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.021416
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0210094
RPL14 ribosomal protein L14 0.0207829
TRIP12 thyroid hormone receptor interactor 12 0.0206582
COPA coatomer protein complex, subunit alpha 0.0206023
RPS17 ribosomal protein S17 0.0205574
APLP2 amyloid beta (A4) precursor-like protein 2 0.0203225

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.30412
TMSB10 thymosin beta 10 -0.0823567
EGR1 early growth response 1 -0.0754188
RAD51B RAD51 paralog B -0.0749825
THSD4 thrombospondin, type I, domain containing 4 -0.0653691
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0629425
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0548977
PFN1 profilin 1 -0.0522469
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0506465
OSMR oncostatin M receptor -0.0491645
EML4 echinoderm microtubule associated protein like 4 -0.046447
GNAS GNAS complex locus -0.0452403
BBX bobby sox homolog (Drosophila) -0.0442607
RPS21 ribosomal protein S21 -0.0428637
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0425298
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0417901
RYR3 ryanodine receptor 3 -0.0416912
PDE10A phosphodiesterase 10A -0.0412503
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0399837
IGF2 insulin-like growth factor 2 -0.0398174
PTK2 protein tyrosine kinase 2 -0.0395493
ZBTB20 zinc finger and BTB domain containing 20 -0.0372119
PHIP pleckstrin homology domain interacting protein -0.0355423
NCOA7 nuclear receptor coactivator 7 -0.0353144
ATP5F1B ATP synthase F1 subunit beta -0.0351657
RPL35A ribosomal protein L35a -0.0349405
TAS2R14 taste receptor, type 2, member 14 -0.0337539
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0335868
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.033443
EXOC4 exocyst complex component 4 -0.0333802
SBF2 SET binding factor 2 -0.0330314
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0326359
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0321903
RSF1 remodeling and spacing factor 1 -0.0317596
MYL12B myosin, light chain 12B, regulatory -0.0317044
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0315502
TMEM165 transmembrane protein 165 -0.0312672
USP34 ubiquitin specific peptidase 34 -0.0310273
IGF1R insulin-like growth factor 1 receptor -0.0308113
HLA-B major histocompatibility complex, class I, B -0.0307183
ITSN1 intersectin 1 (SH3 domain protein) -0.0306329
PHF21A PHD finger protein 21A -0.0305986
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0302329
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.030071
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0292477
HMGA2 high mobility group AT-hook 2 -0.0285374
CCDC91 coiled-coil domain containing 91 -0.0283668
LATS2 large tumor suppressor kinase 2 -0.0282962
ZNF292 zinc finger protein 292 -0.0269843
NF1 neurofibromin 1 -0.0267908
PCNX1 pecanex 1 -0.026728
PDE4D phosphodiesterase 4D, cAMP-specific -0.0260681
TPM2 tropomyosin 2 (beta) -0.0260575
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0260305
CCNL1 cyclin L1 -0.0258252
DEK DEK proto-oncogene -0.0256498
WDPCP WD repeat containing planar cell polarity effector -0.0256485
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 -0.0255321
ANKRD12 ankyrin repeat domain 12 -0.0250055
UBE2H ubiquitin-conjugating enzyme E2H -0.0249838
ADGRG6 adhesion G protein-coupled receptor G6 -0.0246379
RPS15 ribosomal protein S15 -0.0245369
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0243912
ZMYND8 zinc finger, MYND-type containing 8 -0.0242055
IGF2BP1 insulin-like growth factor 2 mRNA binding protein 1 -0.0240177
SMC4 structural maintenance of chromosomes 4 -0.0236266
ANKRD28 ankyrin repeat domain 28 -0.0236234
KDM4B lysine (K)-specific demethylase 4B -0.023254
ATG7 autophagy related 7 -0.0230519
NCOR1 nuclear receptor corepressor 1 -0.0229296
FMN1 formin 1 -0.0228586
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0226593
YBX3 Y box binding protein 3 -0.0224749
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0223985
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0221723
RBM25 RNA binding motif protein 25 -0.0219536
UBE2K ubiquitin-conjugating enzyme E2K -0.0217282
MIS18BP1 MIS18 binding protein 1 -0.0215618
EPAS1 endothelial PAS domain protein 1 -0.0214817
RPL23 ribosomal protein L23 -0.0212058
RFX7 regulatory factor X, 7 -0.0207642
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0207317
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.020695
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0205273
HMGA1 high mobility group AT-hook 1 -0.0204636
KLHL5 kelch-like family member 5 -0.0204544
MT1X metallothionein 1X -0.0204433
KDM2A lysine (K)-specific demethylase 2A -0.0202962
BRWD3 bromodomain and WD repeat domain containing 3 -0.0202533
RIMS2 regulating synaptic membrane exocytosis 2 -0.0202219
ZMYM2 zinc finger, MYM-type 2 -0.0198867
NUP155 nucleoporin 155kDa -0.0197812
CBX3 chromobox homolog 3 -0.0197202
R3HDM1 R3H domain containing 1 -0.0194962
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0194622
POTEF POTE ankyrin domain family, member F -0.0193013
CEP192 centrosomal protein 192kDa -0.0190276
TUBB tubulin, beta class I -0.0188992
PFKP phosphofructokinase, platelet -0.0188566
TAGLN2 transgelin 2 -0.0186487