Pralsetinib_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.255314
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.188593
PABPC1 poly(A) binding protein, cytoplasmic 1 0.160327
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.153725
MYH9 myosin, heavy chain 9, non-muscle 0.0983323
DSPP dentin sialophosphoprotein 0.0926395
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0843184
PTMA prothymosin, alpha 0.0823803
ENO1 enolase 1, (alpha) 0.0805668
ZSWIM6 zinc finger, SWIM-type containing 6 0.0741115
MSN moesin 0.0739686
APLP2 amyloid beta (A4) precursor-like protein 2 0.0730166
FTL ferritin, light polypeptide 0.0721945
CANX calnexin 0.0687871
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0607547
VEGFA vascular endothelial growth factor A 0.0594103
TMSB4X thymosin beta 4, X-linked 0.0587411
EIF1 eukaryotic translation initiation factor 1 0.0559142
ELL2 elongation factor, RNA polymerase II, 2 0.0555644
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0551594
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0547609
MACF1 microtubule-actin crosslinking factor 1 0.0547587
SAMD4A sterile alpha motif domain containing 4A 0.0545244
GOLGB1 golgin B1 0.0525748
MCL1 myeloid cell leukemia 1 0.0508667
LAMB3 laminin, beta 3 0.0502679
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0487695
EXT1 exostosin glycosyltransferase 1 0.0482923
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0477732
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0475593
HSPA8 heat shock 70kDa protein 8 0.0466001
LOC112694756 uncharaterized LOC112694756 0.0454885
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0453806
PRRC2C proline-rich coiled-coil 2C 0.0445125
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.044393
PCBP2 poly(rC) binding protein 2 0.0443077
DTNA dystrobrevin, alpha 0.0439115
UBC ubiquitin C 0.043857
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.043226
EEF2 eukaryotic translation elongation factor 2 0.0432075
TMF1 TATA element modulatory factor 1 0.0419393
TPM3 tropomyosin 3 0.0415391
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0414939
IGFBP3 insulin-like growth factor binding protein 3 0.0414571
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0410568
KTN1 kinectin 1 (kinesin receptor) 0.0409273
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0400834
MYOF myoferlin 0.0399051
SCFD1 sec1 family domain containing 1 0.038759
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0385596
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0384367
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0375718
POTEF POTE ankyrin domain family, member F 0.0358071
DST dystonin 0.0357011
CD109 CD109 molecule 0.035307
AKAP13 A kinase (PRKA) anchor protein 13 0.0351368
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0349505
BRD2 bromodomain containing 2 0.0348286
LAMC2 laminin, gamma 2 0.0346136
CALR calreticulin 0.034104
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0330365
MYO1E myosin IE 0.0330057
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0325274
MACC1 metastasis associated in colon cancer 1 0.0325067
MYO5B myosin VB 0.032474
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0321372
GOLGA4 golgin A4 0.0316705
RAB7A RAB7A, member RAS oncogene family 0.0311084
RAB10 RAB10, member RAS oncogene family 0.0306744
EIF5 eukaryotic translation initiation factor 5 0.0304875
BASP1 brain abundant, membrane attached signal protein 1 0.030427
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0303965
HMGB2 high mobility group box 2 0.0303804
KIAA1217 KIAA1217 0.0303559
PCM1 pericentriolar material 1 0.030205
RPL3 ribosomal protein L3 0.0300834
LNPEP leucyl/cystinyl aminopeptidase 0.0299929
LOC102724023 ES1 protein homolog, mitochondrial 0.0299542
ANO6 anoctamin 6 0.0290108
GLS2 glutaminase 2 (liver, mitochondrial) 0.0287287
EZR ezrin 0.0283496
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0282643
FHIT fragile histidine triad 0.028239
CLTC clathrin, heavy chain (Hc) 0.0281915
MORF4L2 mortality factor 4 like 2 0.0281872
CD44 CD44 molecule (Indian blood group) 0.0277558
ARRDC3 arrestin domain containing 3 0.0277506
CSNK1A1 casein kinase 1, alpha 1 0.0276678
TTC3 tetratricopeptide repeat domain 3 0.0273523
NAV2 neuron navigator 2 0.027229
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0271662
WNK1 WNK lysine deficient protein kinase 1 0.027094
PDIA6 protein disulfide isomerase family A, member 6 0.0270862
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0266314
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0265516
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0264609
SEC31A SEC31 homolog A (S. cerevisiae) 0.0262853
ANKRD17 ankyrin repeat domain 17 0.0260528
ENO2 enolase 2 (gamma, neuronal) 0.0258645
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.025606

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.103901
TPT1 tumor protein, translationally-controlled 1 -0.0946295
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0636657
RPL35A ribosomal protein L35a -0.0622583
CCND1 cyclin D1 -0.0586726
NAMPT nicotinamide phosphoribosyltransferase -0.0564595
LMO7 LIM domain 7 -0.0555289
KRT7 keratin 7, type II -0.0549213
RPL9 ribosomal protein L9 -0.048599
RPL34 ribosomal protein L34 -0.0478203
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0434287
TM4SF1 transmembrane 4 L six family member 1 -0.0392173
RPL11 ribosomal protein L11 -0.0389666
RPS24 ribosomal protein S24 -0.0389296
KDM3A lysine (K)-specific demethylase 3A -0.0385015
CD2AP CD2-associated protein -0.0376748
RPS25 ribosomal protein S25 -0.0376391
TOP1 topoisomerase (DNA) I -0.0374986
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0372474
MARCHF6 membrane associated ring-CH-type finger 6 -0.0358314
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0355691
RPL30 ribosomal protein L30 -0.0332757
RPL19 ribosomal protein L19 -0.0329305
TFG TRK-fused gene -0.032665
RPL37A ribosomal protein L37a -0.032617
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0312978
FAM3C family with sequence similarity 3, member C -0.0302558
PLAU plasminogen activator, urokinase -0.030197
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0301284
RPS13 ribosomal protein S13 -0.0300555
ZFAND6 zinc finger, AN1-type domain 6 -0.0296869
TMEM263 transmembrane protein 263 -0.0296809
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.029517
GNAS GNAS complex locus -0.0287105
TMSB10 thymosin beta 10 -0.0282536
STRN3 striatin, calmodulin binding protein 3 -0.0270923
RPS29 ribosomal protein S29 -0.0267557
RPS3 ribosomal protein S3 -0.0265173
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0258296
RPS23 ribosomal protein S23 -0.0252055
RAD21 RAD21 homolog (S. pombe) -0.0250521
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0245837
DEK DEK proto-oncogene -0.0243689
ARF1 ADP-ribosylation factor 1 -0.02433
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0241437
NPEPPS aminopeptidase puromycin sensitive -0.0238536
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.023796
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0230255
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0227181
RPS5 ribosomal protein S5 -0.0226266
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0224115
CDC50A cell division cycle 50 P4-ATPase accessory subunit A -0.0223948
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0222027
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0220712
ANXA2 annexin A2 -0.0213952
TMEM123 transmembrane protein 123 -0.0211176
RPL12 ribosomal protein L12 -0.0208716
HMGA1 high mobility group AT-hook 1 -0.0208645
TMEM165 transmembrane protein 165 -0.0208264
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0207639
RPL26 ribosomal protein L26 -0.0202914
PRRC1 proline-rich coiled-coil 1 -0.0202835
NPC2 Niemann-Pick disease, type C2 -0.0199694
CAPN2 calpain 2, (m/II) large subunit -0.0199041
RPL31 ribosomal protein L31 -0.0196976
LPP LIM domain containing preferred translocation partner in lipoma -0.0196558
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0194271
LY6E lymphocyte antigen 6 complex, locus E -0.0191912
SMG7 SMG7 nonsense mediated mRNA decay factor -0.0191879
RPLP2 ribosomal protein, large, P2 -0.0191284
RPL28 ribosomal protein L28 -0.0191231
OSBPL3 oxysterol binding protein-like 3 -0.0190291
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.019005
LIMCH1 LIM and calponin homology domains 1 -0.0189214
MORF4L1 mortality factor 4 like 1 -0.0181566
RPL23 ribosomal protein L23 -0.0181367
DUSP5 dual specificity phosphatase 5 -0.0181065
MSMO1 methylsterol monooxygenase 1 -0.0179922
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0178608
TRIO trio Rho guanine nucleotide exchange factor -0.0178441
GNA13 guanine nucleotide binding protein (G protein), alpha 13 -0.0177943
ATP5F1B ATP synthase F1 subunit beta -0.017433
OSMR oncostatin M receptor -0.0171665
RPL6 ribosomal protein L6 -0.0168206
RPS16 ribosomal protein S16 -0.0168021
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0167778
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0167481
RPL7A ribosomal protein L7a -0.0167132
RPL32 ribosomal protein L32 -0.0165427
LMAN1 lectin, mannose-binding, 1 -0.0164914
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0164263
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0162236
CD46 CD46 molecule, complement regulatory protein -0.0160621
RAB1A RAB1A, member RAS oncogene family -0.015703
RPL38 ribosomal protein L38 -0.0156895
AREG amphiregulin -0.0154556
ACTG1 actin gamma 1 -0.0151468
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0151008
CHMP2B charged multivesicular body protein 2B -0.0150458
USP3 ubiquitin specific peptidase 3 -0.0150194