Pralsetinib_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.130488
COL6A3 collagen, type VI, alpha 3 0.120081
STC1 stanniocalcin 1 0.11536
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.113465
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.11299
SMYD3 SET and MYND domain containing 3 0.112881
EXT1 exostosin glycosyltransferase 1 0.108943
CALD1 caldesmon 1 0.108398
FMN1 formin 1 0.106914
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.106698
NALF1 NALCN channel auxiliary factor 1 0.105353
DIAPH2 diaphanous-related formin 2 0.0975125
INHBA inhibin, beta A 0.0950428
FMNL2 formin-like 2 0.0914987
TRIO trio Rho guanine nucleotide exchange factor 0.0912013
EEF2 eukaryotic translation elongation factor 2 0.0841016
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0824183
VIM vimentin 0.0823526
SQSTM1 sequestosome 1 0.079888
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0778089
ASPH aspartate beta-hydroxylase 0.0762735
MYH9 myosin, heavy chain 9, non-muscle 0.0755715
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0741906
PRRC2C proline-rich coiled-coil 2C 0.0735699
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0716738
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0700646
MARCHF4 membrane associated ring-CH-type finger 4 0.0678195
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0658082
NCOR1 nuclear receptor corepressor 1 0.0626905
SRPK2 SRSF protein kinase 2 0.0618439
JARID2 jumonji, AT rich interactive domain 2 0.0592984
NAP1L1 nucleosome assembly protein 1-like 1 0.0592275
GPC6 glypican 6 0.0583728
RPL35A ribosomal protein L35a 0.0576593
CEMIP2 cell migration inducing hyaluronidase 2 0.0567079
BBX bobby sox homolog (Drosophila) 0.055559
PM20D1 peptidase M20 domain containing 1 0.0547269
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0535168
RPL11 ribosomal protein L11 0.0528335
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0518555
FN1 fibronectin 1 0.0512928
RPS16 ribosomal protein S16 0.0496657
DSCAM Down syndrome cell adhesion molecule 0.0495509
CSNK1A1 casein kinase 1, alpha 1 0.0486891
FAT1 FAT atypical cadherin 1 0.0485482
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0475214
CTNND1 catenin (cadherin-associated protein), delta 1 0.0474154
MYO1E myosin IE 0.0447044
DCAF7 DDB1 and CUL4 associated factor 7 0.0442862
RPL38 ribosomal protein L38 0.0442756
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.044207
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 0.0439949
TPR translocated promoter region, nuclear basket protein 0.0439776
VCL vinculin 0.0439161
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0438039
HELZ helicase with zinc finger 0.0431699
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0425488
ZFHX3 zinc finger homeobox 3 0.0422258
DST dystonin 0.0417643
MACF1 microtubule-actin crosslinking factor 1 0.0417112
VMP1 vacuole membrane protein 1 0.0406964
GPHN gephyrin 0.0400383
NF1 neurofibromin 1 0.0400285
FNDC3B fibronectin type III domain containing 3B 0.0396479
ZNF292 zinc finger protein 292 0.038436
LPP LIM domain containing preferred translocation partner in lipoma 0.0375422
SETD5 SET domain containing 5 0.0370954
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0369938
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0363454
SBF2 SET binding factor 2 0.0356952
ZCCHC7 zinc finger, CCHC domain containing 7 0.0352031
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0351871
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0345446
LINGO2 leucine rich repeat and Ig domain containing 2 0.0342834
KDM3A lysine (K)-specific demethylase 3A 0.0331748
ERBIN erbb2 interacting protein 0.0322716
LOC112694756 uncharaterized LOC112694756 0.0320073
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0317262
NIPBL Nipped-B homolog (Drosophila) 0.0309437
CALR calreticulin 0.0307855
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0306467
ENO1 enolase 1, (alpha) 0.0302655
KTN1 kinectin 1 (kinesin receptor) 0.0301954
AKAP9 A kinase (PRKA) anchor protein 9 0.0290519
UBE2H ubiquitin-conjugating enzyme E2H 0.0288813
PDS5B PDS5 cohesin associated factor B 0.0286091
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0284722
AHNAK AHNAK nucleoprotein 0.0282959
LMNA lamin A/C 0.0282674
PTMA prothymosin, alpha 0.0282613
GOLGA4 golgin A4 0.0278504
RPL13A ribosomal protein L13a 0.0278281
RICTOR RPTOR independent companion of MTOR, complex 2 0.0277162
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0274557
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0272928
ANKRD11 ankyrin repeat domain 11 0.0271315
ETNK1 ethanolamine kinase 1 0.0258724
ZFAND3 zinc finger, AN1-type domain 3 0.0258209
GOLGB1 golgin B1 0.0250696
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0248309

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.202783
LAMA4 laminin, alpha 4 -0.130827
EIF1 eukaryotic translation initiation factor 1 -0.129914
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.112632
TPT1 tumor protein, translationally-controlled 1 -0.109426
EFNA5 ephrin-A5 -0.105988
NDRG1 N-myc downstream regulated 1 -0.104627
SLTM SAFB-like, transcription modulator -0.0986847
RPL15 ribosomal protein L15 -0.0968602
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0961171
ALCAM activated leukocyte cell adhesion molecule -0.0919409
RPS13 ribosomal protein S13 -0.0916466
EGR1 early growth response 1 -0.0889687
NAMPT nicotinamide phosphoribosyltransferase -0.0870831
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0806295
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0794217
HMGA2 high mobility group AT-hook 2 -0.07884
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0748274
RPL12 ribosomal protein L12 -0.0746358
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0746033
TJP1 tight junction protein 1 -0.0714562
PRKCA protein kinase C, alpha -0.070081
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0691523
PRELID2 PRELI domain containing 2 -0.0689711
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0676271
RAD51B RAD51 paralog B -0.0666636
ELL2 elongation factor, RNA polymerase II, 2 -0.0666186
ZMYND8 zinc finger, MYND-type containing 8 -0.0655825
ANXA2 annexin A2 -0.0650516
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0626103
AKAP13 A kinase (PRKA) anchor protein 13 -0.0618265
LAMC2 laminin, gamma 2 -0.0606124
YAP1 Yes-associated protein 1 -0.0594785
RPL36 ribosomal protein L36 -0.0583304
RPL37A ribosomal protein L37a -0.0559805
RPS19 ribosomal protein S19 -0.0556331
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0551944
PDE8A phosphodiesterase 8A -0.0551252
CLTC clathrin, heavy chain (Hc) -0.0547865
RPL34 ribosomal protein L34 -0.0542174
CDK13 cyclin-dependent kinase 13 -0.0535604
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0533913
RSF1 remodeling and spacing factor 1 -0.0532333
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.052315
RPL8 ribosomal protein L8 -0.0515177
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0513065
NKD1 naked cuticle homolog 1 (Drosophila) -0.0510232
ARHGAP26 Rho GTPase activating protein 26 -0.0505197
S100A10 S100 calcium binding protein A10 -0.050302
FAM13A family with sequence similarity 13, member A -0.0500606
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0485676
MSI2 musashi RNA-binding protein 2 -0.0478633
PDLIM5 PDZ and LIM domain 5 -0.0473689
UBC ubiquitin C -0.0463736
COL5A1 collagen, type V, alpha 1 -0.0459267
LMAN1 lectin, mannose-binding, 1 -0.0453799
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0447906
RTN4 reticulon 4 -0.0446155
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0444533
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0435479
TPD52 tumor protein D52 -0.0434904
TM9SF3 transmembrane 9 superfamily member 3 -0.042634
LRP1B low density lipoprotein receptor-related protein 1B -0.0424807
CDH13 cadherin 13 -0.0421022
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0420292
AREG amphiregulin -0.041926
FHIT fragile histidine triad -0.0414788
OGA O-GlcNAcase -0.0412597
RPL30 ribosomal protein L30 -0.0402521
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0399811
LAMB3 laminin, beta 3 -0.0399598
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0391275
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0389889
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0387804
RPL31 ribosomal protein L31 -0.0381674
CHD9 chromodomain helicase DNA binding protein 9 -0.0381292
OLA1 Obg-like ATPase 1 -0.0376357
KMT2C lysine (K)-specific methyltransferase 2C -0.0368259
BIRC6 baculoviral IAP repeat containing 6 -0.0364754
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0359545
ATXN1 ataxin 1 -0.0358341
FLNB filamin B, beta -0.0355842
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0353315
CANX calnexin -0.0351627
RPL7 ribosomal protein L7 -0.0346155
HDLBP high density lipoprotein binding protein -0.0339398
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0330906
RPS4X ribosomal protein S4, X-linked -0.0328618
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0328113
ZFC3H1 zinc finger, C3H1-type containing -0.0322887
PDIA3 protein disulfide isomerase family A, member 3 -0.0318435
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0315936
POTEF POTE ankyrin domain family, member F -0.0315037
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0307103
FNIP1 folliculin interacting protein 1 -0.0302846
MFF mitochondrial fission factor -0.0294687
BHLHE40 basic helix-loop-helix family, member e40 -0.0294582
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0290248
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0285765
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0279969