Pralsetinib_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pralsetinib perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pralsetinib_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0906455
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0818164
STC2 stanniocalcin 2 0.0771983
ZSWIM6 zinc finger, SWIM-type containing 6 0.0648886
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0629237
CANX calnexin 0.0600452
FAT1 FAT atypical cadherin 1 0.0587751
ENO1 enolase 1, (alpha) 0.053823
MYOF myoferlin 0.0530158
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0525219
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0504583
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0453308
INTS6 integrator complex subunit 6 0.0434101
NFE2L2 nuclear factor, erythroid 2-like 2 0.0414887
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0388401
CD109 CD109 molecule 0.0385013
MYH9 myosin, heavy chain 9, non-muscle 0.0382301
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0353022
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0352499
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0344571
RPS12 ribosomal protein S12 0.0341196
DSTN destrin (actin depolymerizing factor) 0.0327367
CALR calreticulin 0.0323546
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0321505
SOD2 superoxide dismutase 2, mitochondrial 0.0320426
CXCL8 chemokine (C-X-C motif) ligand 8 0.0319132
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0318004
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0313306
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.030563
BZW1 basic leucine zipper and W2 domains 1 0.0304206
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0303544
EXT1 exostosin glycosyltransferase 1 0.0297747
TRIO trio Rho guanine nucleotide exchange factor 0.0293946
PLIN2 perilipin 2 0.0292921
GPATCH2L G patch domain containing 2-like 0.0290676
AEBP2 AE binding protein 2 0.0284807
TUG1 taurine up-regulated 1 (non-protein coding) 0.0278213
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0266445
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0264653
RACK1 receptor for activated C kinase 1 0.0261064
PDLIM5 PDZ and LIM domain 5 0.0260184
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0257542
HSPA8 heat shock 70kDa protein 8 0.0253505
SQSTM1 sequestosome 1 0.0250954
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0243217
PCBP3 poly(rC) binding protein 3 0.0241624
RUNX1 runt-related transcription factor 1 0.0236551
AKAP12 A kinase (PRKA) anchor protein 12 0.0236086
TUFT1 tuftelin 1 0.0235466
TTC3 tetratricopeptide repeat domain 3 0.0233182
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0232719
ERRFI1 ERBB receptor feedback inhibitor 1 0.0230616
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0230177
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 0.0226381
SAMD4A sterile alpha motif domain containing 4A 0.0225272
AHRR aryl-hydrocarbon receptor repressor 0.0224034
UBAP2 ubiquitin associated protein 2 0.0223728
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.022334
RAB10 RAB10, member RAS oncogene family 0.0222838
RBPMS RNA binding protein with multiple splicing 0.0218689
DSG2 desmoglein 2 0.0218128
RASAL2 RAS protein activator like 2 0.0217706
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0216446
FNIP1 folliculin interacting protein 1 0.0215539
MACF1 microtubule-actin crosslinking factor 1 0.0214748
CEMIP2 cell migration inducing hyaluronidase 2 0.0212771
B2M beta-2-microglobulin 0.0212117
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0210339
CCDC138 coiled-coil domain containing 138 0.0210202
CTBP2 C-terminal binding protein 2 0.0207017
NPAS2 neuronal PAS domain protein 2 0.0205897
PDIA4 protein disulfide isomerase family A, member 4 0.0203208
APP amyloid beta (A4) precursor protein 0.0199211
ENAH enabled homolog (Drosophila) 0.0198463
TMF1 TATA element modulatory factor 1 0.0196905
GPC6 glypican 6 0.0196009
NFE2L1 nuclear factor, erythroid 2-like 1 0.0192623
PTPRK protein tyrosine phosphatase, receptor type, K 0.0192472
RPS27A ribosomal protein S27a 0.0191151
PLK2 polo-like kinase 2 0.0188713
DST dystonin 0.0187148
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0186466
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0184769
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0184751
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0181611
AKAP13 A kinase (PRKA) anchor protein 13 0.0181009
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.017976
ATF6 activating transcription factor 6 0.0179681
NXN nucleoredoxin 0.0177951
FERMT2 fermitin family member 2 0.0177017
MMP13 matrix metallopeptidase 13 0.0176949
SRRM2 serine/arginine repetitive matrix 2 0.0176238
SCFD1 sec1 family domain containing 1 0.0174222
CADM1 cell adhesion molecule 1 0.0173421
RPLP0 ribosomal protein, large, P0 0.01715
RPS3 ribosomal protein S3 0.0171074
HSPH1 heat shock 105kDa/110kDa protein 1 0.0170854
RFX2 regulatory factor X, 2 (influences HLA class II expression) 0.0168847
MB21D2 Mab-21 domain containing 2 0.0167959
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0167401

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.419025
FN1 fibronectin 1 -0.219193
NRG1 neuregulin 1 -0.138891
NAMPT nicotinamide phosphoribosyltransferase -0.136118
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.117283
HMGA2 high mobility group AT-hook 2 -0.116102
ITGA1 integrin, alpha 1 -0.115491
IFI27 interferon, alpha-inducible protein 27 -0.0998419
TMSB10 thymosin beta 10 -0.0956393
TMEM156 transmembrane protein 156 -0.0949346
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0884635
OSMR oncostatin M receptor -0.0849525
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0778303
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0753571
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0681871
NRP1 neuropilin 1 -0.066144
ETV1 ets variant 1 -0.0654129
MCTP2 multiple C2 domains, transmembrane 2 -0.0651149
HLA-B major histocompatibility complex, class I, B -0.0639607
TMEM165 transmembrane protein 165 -0.0638626
FTH1 ferritin, heavy polypeptide 1 -0.0612026
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0595144
S100A6 S100 calcium binding protein A6 -0.0588023
NDRG1 N-myc downstream regulated 1 -0.0585601
TXNIP thioredoxin interacting protein -0.0573115
MT2A metallothionein 2A -0.0568909
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0540588
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0523775
FNBP1 formin binding protein 1 -0.0507421
KLHL5 kelch-like family member 5 -0.0503042
RTN4 reticulon 4 -0.0494467
SMOX spermine oxidase -0.0479522
LY6E lymphocyte antigen 6 complex, locus E -0.0460649
NPC1 Niemann-Pick disease, type C1 -0.0440027
ACTN4 actinin, alpha 4 -0.0435419
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0435075
ARID4B AT rich interactive domain 4B (RBP1-like) -0.041655
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0412339
FNDC3B fibronectin type III domain containing 3B -0.040365
PKM pyruvate kinase, muscle -0.0390844
ITGB5 integrin, beta 5 -0.0389482
RPS21 ribosomal protein S21 -0.0387395
PELO pelota homolog (Drosophila) -0.038671
RPL35A ribosomal protein L35a -0.0385014
HMGA1 high mobility group AT-hook 1 -0.0378676
FOXP1 forkhead box P1 -0.0378278
RBM39 RNA binding motif protein 39 -0.0377598
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0376759
EGR1 early growth response 1 -0.0371402
FTL ferritin, light polypeptide -0.0370848
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0359688
SOX4 SRY (sex determining region Y)-box 4 -0.035839
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0349145
GLIS3 GLIS family zinc finger 3 -0.0347441
ZMYND8 zinc finger, MYND-type containing 8 -0.0342036
ACBD3 acyl-CoA binding domain containing 3 -0.0326701
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0324422
GNAS GNAS complex locus -0.0320503
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0316804
UBE2K ubiquitin-conjugating enzyme E2K -0.0310145
CDC27 cell division cycle 27 -0.0309135
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0307542
ETV6 ets variant 6 -0.0303428
RRBP1 ribosome binding protein 1 -0.0300111
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0299205
SYT1 synaptotagmin I -0.0295138
RAB1A RAB1A, member RAS oncogene family -0.0292486
TM9SF3 transmembrane 9 superfamily member 3 -0.029226
PTK2 protein tyrosine kinase 2 -0.0291975
RBM25 RNA binding motif protein 25 -0.0288995
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0288762
CD44 CD44 molecule (Indian blood group) -0.0287393
UGCG UDP-glucose ceramide glucosyltransferase -0.0285437
IER3 immediate early response 3 -0.0285301
IFI16 interferon, gamma-inducible protein 16 -0.0284365
TGFA transforming growth factor, alpha -0.0283371
PNISR PNN-interacting serine/arginine-rich protein -0.0282015
PTBP3 polypyrimidine tract binding protein 3 -0.0281475
MKI67 marker of proliferation Ki-67 -0.0281068
PDE8A phosphodiesterase 8A -0.0279936
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0275164
DUSP5 dual specificity phosphatase 5 -0.0265559
TMEM263 transmembrane protein 263 -0.0264496
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0263796
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0262647
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0262475
DNAH5 dynein, axonemal, heavy chain 5 -0.0259262
CDCP1 CUB domain containing protein 1 -0.0258557
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0257935
ZNF292 zinc finger protein 292 -0.0254138
RPS11 ribosomal protein S11 -0.0252368
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0252273
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0251285
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0250922
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0248499
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0247053
TSC22D1 TSC22 domain family, member 1 -0.0245855
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0244816
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0244167
FAF2 Fas associated factor family member 2 -0.0243689