Pravastatin (sodium)_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pravastatin (sodium) perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pravastatin (sodium)_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MEST mesoderm specific transcript 0.235023
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0984386
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0728309
PCBP2 poly(rC) binding protein 2 0.0707459
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0690717
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0686318
QKI QKI, KH domain containing, RNA binding 0.0671912
ZFP36L1 ZFP36 ring finger protein-like 1 0.059573
NFIB nuclear factor I/B 0.0551023
PNN pinin, desmosome associated protein 0.0527531
TPX2 TPX2, microtubule-associated 0.0525246
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0517147
VIM vimentin 0.050879
GPBP1 GC-rich promoter binding protein 1 0.0505564
CAMTA1 calmodulin binding transcription activator 1 0.0501205
ZMYM2 zinc finger, MYM-type 2 0.0488768
VEGFA vascular endothelial growth factor A 0.0473221
ZNF292 zinc finger protein 292 0.0450644
CBX3 chromobox homolog 3 0.0448237
NAMPT nicotinamide phosphoribosyltransferase 0.0429676
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0429009
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0428449
DDIT4 DNA-damage-inducible transcript 4 0.0423457
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0421585
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0417116
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0404751
KTN1 kinectin 1 (kinesin receptor) 0.0398137
SSBP2 single-stranded DNA binding protein 2 0.0382288
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0382266
BIRC6 baculoviral IAP repeat containing 6 0.03774
RPS2 ribosomal protein S2 0.0368957
RTN4 reticulon 4 0.0360735
RBM25 RNA binding motif protein 25 0.0358709
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0357959
RLF rearranged L-myc fusion 0.0356511
SFPQ splicing factor proline/glutamine-rich 0.0356509
RPL13A ribosomal protein L13a 0.0353681
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0353023
RICTOR RPTOR independent companion of MTOR, complex 2 0.0351479
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0350241
NBAS neuroblastoma amplified sequence 0.0348877
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.0346837
EEF1G eukaryotic translation elongation factor 1 gamma 0.0345056
RPS12 ribosomal protein S12 0.0344466
TPD52 tumor protein D52 0.0340736
LMNB1 lamin B1 0.0338959
SMAP1 small ArfGAP 1 0.0331892
GOLGA4 golgin A4 0.0330297
HELZ helicase with zinc finger 0.0329077
PDS5B PDS5 cohesin associated factor B 0.03257
FRMD6 FERM domain containing 6 0.0322786
UBA6 ubiquitin-like modifier activating enzyme 6 0.0321809
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0320168
ZEB1 zinc finger E-box binding homeobox 1 0.031742
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.0316149
CASC3 cancer susceptibility candidate 3 0.0314258
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.031425
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0314062
KMT2E lysine (K)-specific methyltransferase 2E 0.0313164
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0307625
PPP4R2 protein phosphatase 4, regulatory subunit 2 0.0306291
SOX9 SRY (sex determining region Y)-box 9 0.030294
FGFR1 fibroblast growth factor receptor 1 0.0301548
TOP1 topoisomerase (DNA) I 0.0300747
WAC WW domain containing adaptor with coiled-coil 0.029932
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0299209
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.029678
VMP1 vacuole membrane protein 1 0.0292092
PRRC2C proline-rich coiled-coil 2C 0.0291542
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0291497
HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 0.0291198
RAD21 RAD21 homolog (S. pombe) 0.0287698
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0287674
AHCTF1 AT hook containing transcription factor 1 0.0283673
CDK19 cyclin-dependent kinase 19 0.0283084
MALSU1 mitochondrial assembly of ribosomal large subunit 1 0.0282043
OFD1 oral-facial-digital syndrome 1 0.0281455
RO60 Ro60, Y RNA binding protein 0.0281116
FAM13A family with sequence similarity 13, member A 0.0278192
FMNL2 formin-like 2 0.0276101
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0275785
YBX1 Y box binding protein 1 0.0275683
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 0.0274334
HDGFL3 HDGF like 3 0.0272309
DENND4C DENN/MADD domain containing 4C 0.0272265
SKAP2 src kinase associated phosphoprotein 2 0.0272249
MYO10 myosin X 0.027205
XPO1 exportin 1 0.0270829
NUP58 nucleoporin 58 0.0270598
RAB6A RAB6A, member RAS oncogene family 0.0270109
GLS2 glutaminase 2 (liver, mitochondrial) 0.0269777
TXNL1 thioredoxin-like 1 0.0269335
RSRC2 arginine/serine-rich coiled-coil 2 0.0269111
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0268459
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0267421
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0265815
DIAPH1 diaphanous-related formin 1 0.0265146
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0265111
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0265021
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0262736

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.114633
PDE4D phosphodiesterase 4D, cAMP-specific -0.114399
PEG10 paternally expressed 10 -0.0729482
CADM2 cell adhesion molecule 2 -0.0707705
FTL ferritin, light polypeptide -0.070124
THSD4 thrombospondin, type I, domain containing 4 -0.0700104
ACTG1 actin gamma 1 -0.0613895
TPK1 thiamin pyrophosphokinase 1 -0.0603856
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0572308
TSHZ2 teashirt zinc finger homeobox 2 -0.0560003
RPL35A ribosomal protein L35a -0.0554
KDM5B lysine (K)-specific demethylase 5B -0.0531028
EGR1 early growth response 1 -0.0526999
IER3 immediate early response 3 -0.0513754
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.051255
TPT1 tumor protein, translationally-controlled 1 -0.0497413
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0488459
RAB7A RAB7A, member RAS oncogene family -0.0473265
CUX1 cut-like homeobox 1 -0.0466724
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.045636
TCF12 transcription factor 12 -0.0455602
HMGA1 high mobility group AT-hook 1 -0.0451971
RPS25 ribosomal protein S25 -0.0447435
RPS23 ribosomal protein S23 -0.0442882
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0440615
IGF2 insulin-like growth factor 2 -0.0425709
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0419217
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0416981
HELLS helicase, lymphoid-specific -0.0415022
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.04133
RPL11 ribosomal protein L11 -0.0408133
PPP1R9A protein phosphatase 1, regulatory subunit 9A -0.0398276
MACF1 microtubule-actin crosslinking factor 1 -0.0395887
FNDC3B fibronectin type III domain containing 3B -0.0385008
RPL37 ribosomal protein L37 -0.038467
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0383538
FBXL7 F-box and leucine-rich repeat protein 7 -0.0383525
FBXO11 F-box protein 11 -0.0381706
FBXL17 F-box and leucine-rich repeat protein 17 -0.0381235
LOC112694756 uncharaterized LOC112694756 -0.037692
ZBTB20 zinc finger and BTB domain containing 20 -0.0376615
MARCHF6 membrane associated ring-CH-type finger 6 -0.0374568
INTS6 integrator complex subunit 6 -0.0371004
KANK1 KN motif and ankyrin repeat domains 1 -0.0364794
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0362253
ARL15 ADP-ribosylation factor-like 15 -0.035606
PDIA3 protein disulfide isomerase family A, member 3 -0.0350912
HMGB1 high mobility group box 1 -0.0347047
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0343787
TPM4 tropomyosin 4 -0.0342514
SH3PXD2B SH3 and PX domains 2B -0.0342477
MYOF myoferlin -0.0335917
AK1 adenylate kinase 1 -0.0335619
CDK13 cyclin-dependent kinase 13 -0.0332828
BCAS3 breast carcinoma amplified sequence 3 -0.032927
HDAC8 histone deacetylase 8 -0.0327946
RPL34 ribosomal protein L34 -0.0327007
NF1 neurofibromin 1 -0.0326204
FOXO3 forkhead box O3 -0.0322536
DEK DEK proto-oncogene -0.0320779
RPL31 ribosomal protein L31 -0.0317085
FUS FUS RNA binding protein -0.0317022
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0315233
EIF1 eukaryotic translation initiation factor 1 -0.0312066
DENND1A DENN/MADD domain containing 1A -0.0311818
PTMA prothymosin, alpha -0.0308353
EEF2 eukaryotic translation elongation factor 2 -0.0308297
FN1 fibronectin 1 -0.0306814
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.03058
TMSB10 thymosin beta 10 -0.030191
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0301814
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0300717
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0300078
EXOC4 exocyst complex component 4 -0.0299456
FAF1 Fas (TNFRSF6) associated factor 1 -0.0294816
SCMH1 sex comb on midleg homolog 1 (Drosophila) -0.0293621
TUBB tubulin, beta class I -0.0289091
RSU1 Ras suppressor protein 1 -0.02887
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0288611
SLC38A2 solute carrier family 38, member 2 -0.0288159
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0287477
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0286645
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0280098
CENPP centromere protein P -0.0277678
LARP4B La ribonucleoprotein domain family, member 4B -0.0277126
BPTF bromodomain PHD finger transcription factor -0.0275056
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.027101
AKR1C1 aldo-keto reductase family 1, member C1 -0.0270871
E2F3 E2F transcription factor 3 -0.027087
RPS15 ribosomal protein S15 -0.0268359
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0267635
TJP1 tight junction protein 1 -0.0267123
ATG10 autophagy related 10 -0.0265764
CCND1 cyclin D1 -0.0263979
LIPG lipase, endothelial -0.0263064
RPS27A ribosomal protein S27a -0.026112
FAM193A family with sequence similarity 193, member A -0.0259804
ATP5F1B ATP synthase F1 subunit beta -0.0259124
SOBP sine oculis binding protein homolog (Drosophila) -0.0258626
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0258385