Pravastatin (sodium)_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pravastatin (sodium) perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pravastatin (sodium)_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS12 ribosomal protein S12 0.191173
RPS17 ribosomal protein S17 0.0940366
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0919907
RPS6 ribosomal protein S6 0.0896251
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0893437
FLNB filamin B, beta 0.0887212
RPS3 ribosomal protein S3 0.0777453
RPL37A ribosomal protein L37a 0.0767646
KCNK1 potassium channel, two pore domain subfamily K, member 1 0.0710961
RPS8 ribosomal protein S8 0.070097
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0678492
AKAP13 A kinase (PRKA) anchor protein 13 0.0676052
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0660981
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.059817
PTPRR protein tyrosine phosphatase, receptor type, R 0.0596627
MSI2 musashi RNA-binding protein 2 0.0590066
PRELID2 PRELI domain containing 2 0.0548247
MYO1E myosin IE 0.0543983
FOXO1 forkhead box O1 0.0535059
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.052953
SRRM2 serine/arginine repetitive matrix 2 0.0527301
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type 0.0525645
NAP1L1 nucleosome assembly protein 1-like 1 0.052313
RNF145 ring finger protein 145 0.0497838
LMO7 LIM domain 7 0.0496874
RPS19 ribosomal protein S19 0.0491079
RAD51B RAD51 paralog B 0.0489522
ITGA6 integrin, alpha 6 0.0489097
GPBP1 GC-rich promoter binding protein 1 0.0462676
DSPP dentin sialophosphoprotein 0.0462491
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0461444
RPL5 ribosomal protein L5 0.0459338
CTNND1 catenin (cadherin-associated protein), delta 1 0.0455023
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0454215
LIMA1 LIM domain and actin binding 1 0.0452636
PDLIM5 PDZ and LIM domain 5 0.0448965
ABHD17C abhydrolase domain containing 17C 0.0433467
SMAD3 SMAD family member 3 0.0428935
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0422644
RPL26 ribosomal protein L26 0.0421136
EREG epiregulin 0.0399543
PDE4D phosphodiesterase 4D, cAMP-specific 0.0392351
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0391967
MYOF myoferlin 0.0389008
RBM25 RNA binding motif protein 25 0.038659
PTPRK protein tyrosine phosphatase, receptor type, K 0.0377777
RPL23 ribosomal protein L23 0.0375075
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0372148
ANKRD11 ankyrin repeat domain 11 0.0361718
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0359344
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0359339
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0357365
SLTM SAFB-like, transcription modulator 0.0354893
BAIAP2L1 BAI1-associated protein 2-like 1 0.035137
CEMIP cell migration inducing protein, hyaluronan binding 0.034817
PRRC2C proline-rich coiled-coil 2C 0.034782
MPRIP myosin phosphatase Rho interacting protein 0.0335115
AREG amphiregulin 0.0324528
LPP LIM domain containing preferred translocation partner in lipoma 0.0324031
TRIM2 tripartite motif containing 2 0.0323917
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0322723
ACTN4 actinin, alpha 4 0.0319243
VCL vinculin 0.0317061
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0316459
ASPH aspartate beta-hydroxylase 0.0313844
EXT1 exostosin glycosyltransferase 1 0.0311212
ITPRID2 ITPR interacting domain containing 2 0.0308226
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0307485
MYH9 myosin, heavy chain 9, non-muscle 0.0305758
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0301811
RABGAP1L RAB GTPase activating protein 1-like 0.0295986
NKTR natural killer cell triggering receptor 0.029565
PELI1 pellino E3 ubiquitin protein ligase 1 0.0294971
AKAP9 A kinase (PRKA) anchor protein 9 0.0292472
MED13L mediator complex subunit 13-like 0.0290833
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0289815
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0286182
MYO6 myosin VI 0.0284945
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0284671
CD47 CD47 molecule 0.0284099
RIMKLB ribosomal modification protein rimK-like family member B 0.0284028
CCSER1 coiled-coil serine-rich protein 1 0.0283022
KTN1 kinectin 1 (kinesin receptor) 0.0275012
ARHGAP26 Rho GTPase activating protein 26 0.0273805
RPL30 ribosomal protein L30 0.0272697
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.027055
ZSWIM6 zinc finger, SWIM-type containing 6 0.026621
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0264703
KMT2C lysine (K)-specific methyltransferase 2C 0.0264602
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0263753
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0260787
UBE3A ubiquitin protein ligase E3A 0.0260261
PLAUR plasminogen activator, urokinase receptor 0.0258228
LAMB3 laminin, beta 3 0.0257139
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0257036
SAMD4A sterile alpha motif domain containing 4A 0.0255196
MAML2 mastermind-like 2 (Drosophila) 0.0252749
CBX3 chromobox homolog 3 0.0251022
BACE2 beta-site APP-cleaving enzyme 2 0.0249963
VMP1 vacuole membrane protein 1 0.0249054

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.27399
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.157228
TPT1 tumor protein, translationally-controlled 1 -0.144016
EPS8 epidermal growth factor receptor pathway substrate 8 -0.12786
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.124968
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.105326
RPLP0 ribosomal protein, large, P0 -0.0831449
ACTG1 actin gamma 1 -0.082509
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0778058
CANX calnexin -0.0730898
LOC112694756 uncharaterized LOC112694756 -0.0687184
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0683401
HDLBP high density lipoprotein binding protein -0.0611986
PDIA3 protein disulfide isomerase family A, member 3 -0.0580153
IARS1 isoleucyl-tRNA synthetase 1 -0.0578099
RPL8 ribosomal protein L8 -0.0570674
DSG2 desmoglein 2 -0.0520636
RPL12 ribosomal protein L12 -0.0509705
CALU calumenin -0.0489823
EGR1 early growth response 1 -0.0484297
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0432624
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0411775
KDM3A lysine (K)-specific demethylase 3A -0.0385583
KRT18 keratin 18, type I -0.0376088
AHNAK AHNAK nucleoprotein -0.0366503
AGR2 anterior gradient 2 -0.0366031
RRBP1 ribosome binding protein 1 -0.0364477
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0350487
HMGA1 high mobility group AT-hook 1 -0.0343263
RAB1A RAB1A, member RAS oncogene family -0.0337462
P4HB prolyl 4-hydroxylase, beta polypeptide -0.033412
RPS11 ribosomal protein S11 -0.0333586
H1-0 H1.0 linker histone -0.0327341
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0320405
VDAC1 voltage-dependent anion channel 1 -0.0319478
RPL38 ribosomal protein L38 -0.0317081
ANXA2 annexin A2 -0.0307418
FUS FUS RNA binding protein -0.0307044
RAB7A RAB7A, member RAS oncogene family -0.0298132
PTMA prothymosin, alpha -0.0293142
RPS24 ribosomal protein S24 -0.0282674
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0279534
ENO1 enolase 1, (alpha) -0.0278696
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0278396
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0277242
ARF1 ADP-ribosylation factor 1 -0.027156
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0266811
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0266651
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0263339
HMGB1 high mobility group box 1 -0.026207
MX1 MX dynamin-like GTPase 1 -0.0258967
RPS23 ribosomal protein S23 -0.025703
HLA-B major histocompatibility complex, class I, B -0.0254877
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0254836
IRF1 interferon regulatory factor 1 -0.0253023
RPS15 ribosomal protein S15 -0.0252957
MARCHF6 membrane associated ring-CH-type finger 6 -0.0246467
KRT19 keratin 19, type I -0.0246117
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.024543
RPS16 ribosomal protein S16 -0.0244677
FTH1 ferritin, heavy polypeptide 1 -0.0243723
NDRG1 N-myc downstream regulated 1 -0.0240289
TMEM123 transmembrane protein 123 -0.0239857
UBC ubiquitin C -0.0237563
TUBB tubulin, beta class I -0.0232726
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0228979
LDHA lactate dehydrogenase A -0.0226315
GDF15 growth differentiation factor 15 -0.022313
TC2N tandem C2 domains, nuclear -0.0222808
TPI1 triosephosphate isomerase 1 -0.02212
HMGB2 high mobility group box 2 -0.0220105
MORF4L2 mortality factor 4 like 2 -0.0219113
RHOA ras homolog family member A -0.021735
PCNP PEST proteolytic signal containing nuclear protein -0.0217098
PDIA4 protein disulfide isomerase family A, member 4 -0.021647
S100A10 S100 calcium binding protein A10 -0.0213628
OXSR1 oxidative stress responsive 1 -0.021293
DEK DEK proto-oncogene -0.0212877
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0211701
HBP1 HMG-box transcription factor 1 -0.020893
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0208086
TRA2A transformer 2 alpha homolog (Drosophila) -0.0206963
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0205806
XAF1 XIAP associated factor 1 -0.0205795
TXNIP thioredoxin interacting protein -0.0205691
ARCN1 archain 1 -0.0199515
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0198382
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0198267
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0197493
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0196691
FTL ferritin, light polypeptide -0.0196595
IFITM3 interferon induced transmembrane protein 3 -0.0196367
ZNF207 zinc finger protein 207 -0.0196345
ATF4 activating transcription factor 4 -0.0196118
IFI27 interferon, alpha-inducible protein 27 -0.0196106
IFI6 interferon, alpha-inducible protein 6 -0.0195751
STAU1 staufen double-stranded RNA binding protein 1 -0.0195074
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0194921
UBE2I ubiquitin-conjugating enzyme E2I -0.019437
RBM3 RNA binding motif (RNP1, RRM) protein 3 -0.0192117