Pravastatin (sodium)_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pravastatin (sodium) perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pravastatin (sodium)_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.0946316
KTN1 kinectin 1 (kinesin receptor) 0.0824989
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0732889
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0591851
RBM25 RNA binding motif protein 25 0.0511882
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0504965
SMC4 structural maintenance of chromosomes 4 0.0496177
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0482957
SET SET nuclear proto-oncogene 0.0444988
VIM vimentin 0.0441767
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0420776
PNN pinin, desmosome associated protein 0.0410931
TPI1 triosephosphate isomerase 1 0.0396182
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.039431
RPS12 ribosomal protein S12 0.038626
HDGF hepatoma-derived growth factor 0.0384893
ZCCHC7 zinc finger, CCHC domain containing 7 0.0381813
MT2A metallothionein 2A 0.0377504
EIF5B eukaryotic translation initiation factor 5B 0.0377021
RPS3 ribosomal protein S3 0.036882
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0362255
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0353613
RPL37A ribosomal protein L37a 0.0343569
RPL26 ribosomal protein L26 0.0339441
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0332357
ANKRD36 ankyrin repeat domain 36 0.0322317
CBX3 chromobox homolog 3 0.0321494
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0317363
AKAP9 A kinase (PRKA) anchor protein 9 0.030801
NAP1L1 nucleosome assembly protein 1-like 1 0.0296162
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0294644
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0293258
YBX1 Y box binding protein 1 0.0286413
ANKRD28 ankyrin repeat domain 28 0.0280282
RPS8 ribosomal protein S8 0.0279959
RAB6A RAB6A, member RAS oncogene family 0.0279598
RPS17 ribosomal protein S17 0.027833
RPS6 ribosomal protein S6 0.0276298
SMAP1 small ArfGAP 1 0.0272664
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0271927
RPS27 ribosomal protein S27 0.0269249
NCKAP1 NCK-associated protein 1 0.0268914
SERBP1 SERPINE1 mRNA binding protein 1 0.0259102
PTMA prothymosin, alpha 0.0256016
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0253062
PRELID2 PRELI domain containing 2 0.0251104
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0248556
CEP192 centrosomal protein 192kDa 0.024774
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0246803
FAM168A family with sequence similarity 168, member A 0.0242927
TMEM14B transmembrane protein 14B 0.0242199
PABPN1 poly(A) binding protein, nuclear 1 0.0241105
PCBP2 poly(rC) binding protein 2 0.0238164
AVL9 AVL9 homolog (S. cerevisiase) 0.0237665
NUP58 nucleoporin 58 0.023622
RPL9 ribosomal protein L9 0.023196
CHD1L chromodomain helicase DNA binding protein 1-like 0.0230837
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0228868
KIF5B kinesin family member 5B 0.0225108
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0225073
PPP1R21 protein phosphatase 1, regulatory subunit 21 0.0224685
PNISR PNN-interacting serine/arginine-rich protein 0.0224566
ZNF292 zinc finger protein 292 0.0223789
ATP5F1E ATP synthase F1 subunit epsilon 0.0222236
RPS26 ribosomal protein S26 0.0219436
PPME1 protein phosphatase methylesterase 1 0.0219029
BAIAP2L1 BAI1-associated protein 2-like 1 0.0217541
RPL27 ribosomal protein L27 0.0216285
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0215125
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.0214982
KMT2E lysine (K)-specific methyltransferase 2E 0.021497
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0210005
BABAM2 BRISC and BRCA1 A complex member 2 0.0208996
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0208005
LDHB lactate dehydrogenase B 0.0207863
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0207694
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 0.0207409
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0204205
ANKRD36B ankyrin repeat domain 36B 0.0202163
DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 0.0201764
BBX bobby sox homolog (Drosophila) 0.0199288
RPL5 ribosomal protein L5 0.0198982
CASC3 cancer susceptibility candidate 3 0.0198453
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0196623
ZBTB20 zinc finger and BTB domain containing 20 0.0195581
TPM3 tropomyosin 3 0.0192628
RBM6 RNA binding motif protein 6 0.0192378
CENPF centromere protein F, 350/400kDa 0.0191918
RPS21 ribosomal protein S21 0.0191151
FAM162A family with sequence similarity 162, member A 0.0190692
NGLY1 N-glycanase 1 0.0189464
PFKP phosphofructokinase, platelet 0.0188385
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0188213
RPS2 ribosomal protein S2 0.0187491
FAF1 Fas (TNFRSF6) associated factor 1 0.0187332
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 0.0186285
GIGYF2 GRB10 interacting GYF protein 2 0.0185871
UBN2 ubinuclein 2 0.0183974
USP24 ubiquitin specific peptidase 24 0.0183777
EIF5AL1 eukaryotic translation initiation factor 5A-like 1 0.018013

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.345477
TXNRD1 thioredoxin reductase 1 -0.132762
TFPI2 tissue factor pathway inhibitor 2 -0.115577
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.115172
IGF1R insulin-like growth factor 1 receptor -0.0973785
EGR1 early growth response 1 -0.0873938
ACTG1 actin gamma 1 -0.0866972
UBC ubiquitin C -0.0853717
PDE4D phosphodiesterase 4D, cAMP-specific -0.0814824
OSMR oncostatin M receptor -0.0799184
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0792605
ELL2 elongation factor, RNA polymerase II, 2 -0.0729358
VCL vinculin -0.0704876
MCL1 myeloid cell leukemia 1 -0.0669828
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0628193
PDE10A phosphodiesterase 10A -0.0612255
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0606972
RAB7A RAB7A, member RAS oncogene family -0.0603813
TRIP12 thyroid hormone receptor interactor 12 -0.0598334
EML4 echinoderm microtubule associated protein like 4 -0.0584114
NABP1 nucleic acid binding protein 1 -0.0575097
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0562079
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0533669
TM4SF1 transmembrane 4 L six family member 1 -0.0531237
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0529329
AHNAK AHNAK nucleoprotein -0.0513455
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0493609
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0487108
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0485136
SLC38A2 solute carrier family 38, member 2 -0.0482502
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0476072
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.047044
GRAMD1B GRAM domain containing 1B -0.0469956
NF1 neurofibromin 1 -0.0465552
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.046532
ATF6 activating transcription factor 6 -0.0458476
LOC102724023 ES1 protein homolog, mitochondrial -0.0454382
RIMS2 regulating synaptic membrane exocytosis 2 -0.0445451
NCOA7 nuclear receptor coactivator 7 -0.0442236
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.044109
EEF2 eukaryotic translation elongation factor 2 -0.0436643
FBXO11 F-box protein 11 -0.0433606
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0426648
ZNFX1 zinc finger, NFX1-type containing 1 -0.042661
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0415058
SPAG9 sperm associated antigen 9 -0.0414316
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0413795
NIPBL Nipped-B homolog (Drosophila) -0.0408526
CLTC clathrin, heavy chain (Hc) -0.0406134
IER3 immediate early response 3 -0.0405553
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0403311
FUS FUS RNA binding protein -0.0397145
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0393655
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0391739
LOC112694756 uncharaterized LOC112694756 -0.0391733
CDK12 cyclin-dependent kinase 12 -0.0390693
TPT1 tumor protein, translationally-controlled 1 -0.0390558
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0385869
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0382858
WNT2B wingless-type MMTV integration site family, member 2B -0.0380477
TMSB10 thymosin beta 10 -0.037524
CDK17 cyclin-dependent kinase 17 -0.0363711
EXT1 exostosin glycosyltransferase 1 -0.0360933
ZFAND3 zinc finger, AN1-type domain 3 -0.0355694
CCND1 cyclin D1 -0.0355575
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0355571
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0346753
INTS6 integrator complex subunit 6 -0.034363
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.034249
STAU1 staufen double-stranded RNA binding protein 1 -0.0336671
H1-0 H1.0 linker histone -0.0334502
ADAR adenosine deaminase, RNA-specific -0.0332223
MORF4L2 mortality factor 4 like 2 -0.0331894
WSB1 WD repeat and SOCS box containing 1 -0.0331478
KLF6 Kruppel-like factor 6 -0.0327059
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0324788
PLSCR1 phospholipid scramblase 1 -0.0324242
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0324137
TAS2R14 taste receptor, type 2, member 14 -0.031538
PRRC2B proline-rich coiled-coil 2B -0.0314244
RBM39 RNA binding motif protein 39 -0.0313845
RPS15 ribosomal protein S15 -0.0313784
SNAP25 synaptosomal-associated protein, 25kDa -0.0306227
RIGI RNA sensor RIG-I -0.0305262
SETX senataxin -0.0304007
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0303598
TMEM131 transmembrane protein 131 -0.0299592
RAB1A RAB1A, member RAS oncogene family -0.0299346
YAP1 Yes-associated protein 1 -0.0297751
PDIA3 protein disulfide isomerase family A, member 3 -0.0297569
HDLBP high density lipoprotein binding protein -0.0297392
JUN jun proto-oncogene -0.0294476
RPL8 ribosomal protein L8 -0.0294158
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0292103
BICD1 bicaudal D homolog 1 (Drosophila) -0.0290391
KDM3A lysine (K)-specific demethylase 3A -0.0290182
CTTN cortactin -0.0287761
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0286965
RAB10 RAB10, member RAS oncogene family -0.0284552
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0282968