Pravastatin (sodium)_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pravastatin (sodium) perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pravastatin (sodium)_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.155578
ASPH aspartate beta-hydroxylase 0.149539
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.139198
NDRG1 N-myc downstream regulated 1 0.137346
S100A6 S100 calcium binding protein A6 0.113303
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.101444
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.09889
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0910124
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0894755
ZFP36L1 ZFP36 ring finger protein-like 1 0.0859673
BHLHE40 basic helix-loop-helix family, member e40 0.0795178
NAMPT nicotinamide phosphoribosyltransferase 0.0784817
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0667018
RPS12 ribosomal protein S12 0.0657046
RACK1 receptor for activated C kinase 1 0.0646373
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0605777
MT2A metallothionein 2A 0.0552935
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0542317
RPS3 ribosomal protein S3 0.0538804
SDC4 syndecan 4 0.0526174
ELL2 elongation factor, RNA polymerase II, 2 0.0516836
RPS19 ribosomal protein S19 0.0513017
UBA6 ubiquitin-like modifier activating enzyme 6 0.0496627
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0484734
RPL23 ribosomal protein L23 0.0478469
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0470125
CD46 CD46 molecule, complement regulatory protein 0.0468781
NAP1L1 nucleosome assembly protein 1-like 1 0.0467198
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0455269
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0449277
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0439284
LAMB3 laminin, beta 3 0.0437168
CBX3 chromobox homolog 3 0.0435174
MYH9 myosin, heavy chain 9, non-muscle 0.0435039
TFG TRK-fused gene 0.0433231
RAD21 RAD21 homolog (S. pombe) 0.0420705
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0418485
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0410186
TMSB4X thymosin beta 4, X-linked 0.040612
DUSP6 dual specificity phosphatase 6 0.0405381
ARRDC3 arrestin domain containing 3 0.0404504
RPLP1 ribosomal protein, large, P1 0.0401886
RPL4 ribosomal protein L4 0.0401179
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0398522
GPX4 glutathione peroxidase 4 0.0389966
MSMO1 methylsterol monooxygenase 1 0.0388218
RNF145 ring finger protein 145 0.0381867
TMSB10 thymosin beta 10 0.037792
HMGB2 high mobility group box 2 0.037677
RPS17 ribosomal protein S17 0.0370101
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.036849
TXNRD1 thioredoxin reductase 1 0.036788
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0361862
UGCG UDP-glucose ceramide glucosyltransferase 0.0357075
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0354766
RPL37A ribosomal protein L37a 0.0353536
AREG amphiregulin 0.0351525
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0351354
RPL26 ribosomal protein L26 0.0348046
MSN moesin 0.0344564
RPL5 ribosomal protein L5 0.033822
PDIA6 protein disulfide isomerase family A, member 6 0.0327678
LDHA lactate dehydrogenase A 0.032754
DDIT4 DNA-damage-inducible transcript 4 0.0325898
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0323718
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0316631
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0305588
RPL18 ribosomal protein L18 0.030532
NCKAP1 NCK-associated protein 1 0.0302407
RPLP0 ribosomal protein, large, P0 0.0301454
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0297464
ANXA5 annexin A5 0.0295322
FAM162A family with sequence similarity 162, member A 0.0293951
YBX1 Y box binding protein 1 0.0290543
RPL30 ribosomal protein L30 0.0290012
TOP1 topoisomerase (DNA) I 0.0288154
RPS6 ribosomal protein S6 0.0282674
TRIO trio Rho guanine nucleotide exchange factor 0.0281203
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0279889
RPS8 ribosomal protein S8 0.0279854
PCBP2 poly(rC) binding protein 2 0.0277665
CALR calreticulin 0.0277032
AHNAK AHNAK nucleoprotein 0.0275143
ERRFI1 ERBB receptor feedback inhibitor 1 0.0274627
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0270771
APLP2 amyloid beta (A4) precursor-like protein 2 0.0268983
SQSTM1 sequestosome 1 0.0268706
RPL32 ribosomal protein L32 0.0267894
NUP58 nucleoporin 58 0.0264678
FAM3C family with sequence similarity 3, member C 0.0263816
FXR1 fragile X mental retardation, autosomal homolog 1 0.0262905
KTN1 kinectin 1 (kinesin receptor) 0.0262279
SEPTIN7 septin 7 0.0259716
HSPA8 heat shock 70kDa protein 8 0.0256133
STARD4 StAR-related lipid transfer (START) domain containing 4 0.0255558
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0252155
RPS4X ribosomal protein S4, X-linked 0.024729
CCNL1 cyclin L1 0.024677
TUBA1B tubulin, alpha 1b 0.0241459
GARS1 glycyl-tRNA synthetase 1 0.0237939

decreased expression

Symbol Name Standardized Value
ACTG1 actin gamma 1 -0.156903
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.107588
LIMCH1 LIM and calponin homology domains 1 -0.0912211
SAMD4A sterile alpha motif domain containing 4A -0.089113
EXT1 exostosin glycosyltransferase 1 -0.0849842
LPP LIM domain containing preferred translocation partner in lipoma -0.0819163
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0766353
IGFBP3 insulin-like growth factor binding protein 3 -0.0766328
RAB7A RAB7A, member RAS oncogene family -0.073114
FBXO32 F-box protein 32 -0.0685062
ERBIN erbb2 interacting protein -0.0674376
TM4SF1 transmembrane 4 L six family member 1 -0.0549018
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0538838
GOLGB1 golgin B1 -0.052301
SEC31A SEC31 homolog A (S. cerevisiae) -0.0514596
MAP3K13 mitogen-activated protein kinase kinase kinase 13 -0.0493523
HLA-A major histocompatibility complex, class I, A -0.0492746
MYO1E myosin IE -0.0484069
UBE2H ubiquitin-conjugating enzyme E2H -0.0481013
CCND1 cyclin D1 -0.0475312
PDLIM5 PDZ and LIM domain 5 -0.0474293
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0468741
FBXO11 F-box protein 11 -0.0457439
POTEF POTE ankyrin domain family, member F -0.0453373
KDM5B lysine (K)-specific demethylase 5B -0.0452615
MCU mitochondrial calcium uniporter -0.0447867
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0443025
BLZF1 basic leucine zipper nuclear factor 1 -0.042873
PTMA prothymosin, alpha -0.0425577
TPM4 tropomyosin 4 -0.0425529
FTL ferritin, light polypeptide -0.0419638
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.041597
ANKRD17 ankyrin repeat domain 17 -0.0411821
WASF2 WAS protein family, member 2 -0.0410841
VCL vinculin -0.0407858
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0404766
FNIP1 folliculin interacting protein 1 -0.0400926
EFNA5 ephrin-A5 -0.0392399
HLA-B major histocompatibility complex, class I, B -0.0380331
SETD5 SET domain containing 5 -0.0380072
CSNK1A1 casein kinase 1, alpha 1 -0.0373324
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0369917
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0363135
ZBTB20 zinc finger and BTB domain containing 20 -0.0362151
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0355301
PPP1R13B protein phosphatase 1, regulatory subunit 13B -0.0354467
CEP350 centrosomal protein 350kDa -0.035406
MAP4 microtubule-associated protein 4 -0.0353867
RAI14 retinoic acid induced 14 -0.0343748
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0342325
SH3KBP1 SH3-domain kinase binding protein 1 -0.0340089
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0339993
RAB1A RAB1A, member RAS oncogene family -0.0336054
RASAL2 RAS protein activator like 2 -0.0333544
COPB1 coatomer protein complex, subunit beta 1 -0.033218
RNF213 ring finger protein 213 -0.0331686
KDM2A lysine (K)-specific demethylase 2A -0.0328868
TTC3 tetratricopeptide repeat domain 3 -0.0328448
KLHL24 kelch-like family member 24 -0.0328277
JMJD1C jumonji domain containing 1C -0.0326412
MX2 MX dynamin-like GTPase 2 -0.0321557
FTH1 ferritin, heavy polypeptide 1 -0.0321261
CDK13 cyclin-dependent kinase 13 -0.0316109
ANXA2 annexin A2 -0.0315571
EIF1 eukaryotic translation initiation factor 1 -0.0315525
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha -0.0315021
AOPEP aminopeptidase O (putative) -0.0313912
ARHGAP20 Rho GTPase activating protein 20 -0.0311437
ATOSA atos homolog A -0.031045
PALLD palladin, cytoskeletal associated protein -0.0309709
FN1 fibronectin 1 -0.0309572
HDLBP high density lipoprotein binding protein -0.0307201
ENO2 enolase 2 (gamma, neuronal) -0.0306888
RAB5A RAB5A, member RAS oncogene family -0.0306411
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0305425
MAML2 mastermind-like 2 (Drosophila) -0.0300953
MON2 MON2 homolog (S. cerevisiae) -0.0300395
NIPBL Nipped-B homolog (Drosophila) -0.0299609
F3 coagulation factor III (thromboplastin, tissue factor) -0.0299201
NF1 neurofibromin 1 -0.0298076
ZFAND3 zinc finger, AN1-type domain 3 -0.0296958
ARF1 ADP-ribosylation factor 1 -0.0294994
HSPB1 heat shock 27kDa protein 1 -0.0293538
FBXL2 F-box and leucine-rich repeat protein 2 -0.0293462
FBXO34 F-box protein 34 -0.0290814
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0289834
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0288094
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0287773
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0285773
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0285357
FNBP4 formin binding protein 4 -0.0281424
AFF1 AF4/FMR2 family, member 1 -0.0279193
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 -0.0278251
YY1 YY1 transcription factor -0.0277506
IQGAP1 IQ motif containing GTPase activating protein 1 -0.027672
CTSB cathepsin B -0.027458
KMT2C lysine (K)-specific methyltransferase 2C -0.0271984
WARS1 tryptophanyl-tRNA synthetase 1 -0.0271745
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0269421
RBM39 RNA binding motif protein 39 -0.026763