Pravastatin (sodium)_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pravastatin (sodium) perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pravastatin (sodium)_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CXCL8 chemokine (C-X-C motif) ligand 8 0.143973
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.119974
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.119217
EFNA5 ephrin-A5 0.0962249
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0958559
PCBP2 poly(rC) binding protein 2 0.0913763
PTMA prothymosin, alpha 0.0901192
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.086682
RPS12 ribosomal protein S12 0.0745824
NAP1L1 nucleosome assembly protein 1-like 1 0.0721768
LIMCH1 LIM and calponin homology domains 1 0.069526
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0602807
VIM vimentin 0.0601539
KMT2C lysine (K)-specific methyltransferase 2C 0.0584615
S100A6 S100 calcium binding protein A6 0.0583484
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0582073
ASPH aspartate beta-hydroxylase 0.0575395
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0573303
MCL1 myeloid cell leukemia 1 0.0570991
FAM13A family with sequence similarity 13, member A 0.0563336
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0558506
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0551479
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0544523
FNDC3B fibronectin type III domain containing 3B 0.0544452
SET SET nuclear proto-oncogene 0.0543967
DDIT4 DNA-damage-inducible transcript 4 0.053358
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0532907
OGA O-GlcNAcase 0.0517494
PSD3 pleckstrin and Sec7 domain containing 3 0.0510042
UBA6 ubiquitin-like modifier activating enzyme 6 0.0506703
KTN1 kinectin 1 (kinesin receptor) 0.0493879
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0490581
TRIO trio Rho guanine nucleotide exchange factor 0.0489681
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0486179
KMT2E lysine (K)-specific methyltransferase 2E 0.0475978
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0473302
RPL26 ribosomal protein L26 0.0469376
BZW1 basic leucine zipper and W2 domains 1 0.0465525
AHNAK AHNAK nucleoprotein 0.0461569
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0457654
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.044709
PRRC2C proline-rich coiled-coil 2C 0.0438837
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0431302
DNER delta/notch-like EGF repeat containing 0.043026
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0418618
ATP13A3 ATPase type 13A3 0.0415016
RPS3 ribosomal protein S3 0.0413991
PCBP3 poly(rC) binding protein 3 0.0413185
ESYT2 extended synaptotagmin-like protein 2 0.0410115
RBM25 RNA binding motif protein 25 0.0402368
PDGFA platelet-derived growth factor alpha polypeptide 0.0401829
SPAG9 sperm associated antigen 9 0.0398588
ZNF292 zinc finger protein 292 0.0395182
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0394244
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0393938
RPL3 ribosomal protein L3 0.0393101
HDGF hepatoma-derived growth factor 0.0390963
FMNL2 formin-like 2 0.0390887
RPL4 ribosomal protein L4 0.0389354
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0384516
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0382342
STC1 stanniocalcin 1 0.0381377
RNF145 ring finger protein 145 0.0380916
COL4A6 collagen, type IV, alpha 6 0.0361154
CHD1L chromodomain helicase DNA binding protein 1-like 0.0358051
CTSC cathepsin C 0.0355484
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0352788
RPL37A ribosomal protein L37a 0.034473
COPA coatomer protein complex, subunit alpha 0.0334297
RPS8 ribosomal protein S8 0.0331141
USP34 ubiquitin specific peptidase 34 0.0325993
GIGYF2 GRB10 interacting GYF protein 2 0.0324876
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0323918
APLP2 amyloid beta (A4) precursor-like protein 2 0.0323698
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0320255
LMNA lamin A/C 0.0316438
TNIP1 TNFAIP3 interacting protein 1 0.031028
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0309561
AKAP12 A kinase (PRKA) anchor protein 12 0.0309477
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0306415
NCKAP1 NCK-associated protein 1 0.0304976
TOP1 topoisomerase (DNA) I 0.0304012
TPM3 tropomyosin 3 0.0302737
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0302236
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) 0.0300192
CTBP2 C-terminal binding protein 2 0.0298356
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0296454
THOC2 THO complex 2 0.0295153
FLNB filamin B, beta 0.0294548
RAI1 retinoic acid induced 1 0.029369
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.029314
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0290931
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.028977
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0288694
GOLGA4 golgin A4 0.0288582
PTEN phosphatase and tensin homolog 0.0274925
MYOF myoferlin 0.0266578
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0260925
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0260759
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0259816

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.390299
FN1 fibronectin 1 -0.146113
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.141391
PDE4D phosphodiesterase 4D, cAMP-specific -0.116811
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0995752
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0913903
TXNRD1 thioredoxin reductase 1 -0.0912951
TMSB10 thymosin beta 10 -0.0897978
COL8A1 collagen, type VIII, alpha 1 -0.0896738
TM4SF1 transmembrane 4 L six family member 1 -0.0783286
RPLP1 ribosomal protein, large, P1 -0.0719997
FTL ferritin, light polypeptide -0.0715482
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.062677
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0564053
FTH1 ferritin, heavy polypeptide 1 -0.0553063
RPS24 ribosomal protein S24 -0.0536492
TPT1 tumor protein, translationally-controlled 1 -0.0508258
LOC112694756 uncharaterized LOC112694756 -0.0486721
RPL35A ribosomal protein L35a -0.0483367
GDA guanine deaminase -0.0481417
RPS23 ribosomal protein S23 -0.0471101
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0452995
PM20D1 peptidase M20 domain containing 1 -0.0452662
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0440419
P3H2 prolyl 3-hydroxylase 2 -0.0396374
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0387427
VDAC1 voltage-dependent anion channel 1 -0.0370055
EGR1 early growth response 1 -0.0353051
OSMR oncostatin M receptor -0.0340506
EIF1 eukaryotic translation initiation factor 1 -0.0336313
RPL34 ribosomal protein L34 -0.0334134
RPLP0 ribosomal protein, large, P0 -0.0326039
TGFBI transforming growth factor, beta-induced, 68kDa -0.030991
NCOA7 nuclear receptor coactivator 7 -0.0305829
NT5C2 5'-nucleotidase, cytosolic II -0.030455
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0304462
PDIA3 protein disulfide isomerase family A, member 3 -0.03044
RPS19 ribosomal protein S19 -0.0300675
ACTG1 actin gamma 1 -0.0297671
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0274907
VCL vinculin -0.0273476
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0272533
RPL19 ribosomal protein L19 -0.0271222
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0268685
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0267096
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0265091
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.026103
PDE10A phosphodiesterase 10A -0.0252318
RPL32 ribosomal protein L32 -0.0242627
TUSC3 tumor suppressor candidate 3 -0.0241912
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0235153
ARF1 ADP-ribosylation factor 1 -0.0235074
RPS15 ribosomal protein S15 -0.0233824
SORBS2 sorbin and SH3 domain containing 2 -0.0233287
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.0232891
ZBTB38 zinc finger and BTB domain containing 38 -0.0232234
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0226349
IGFBP3 insulin-like growth factor binding protein 3 -0.0224684
RHOB ras homolog family member B -0.0215486
AGTPBP1 ATP/GTP binding protein 1 -0.0211676
RPS5 ribosomal protein S5 -0.0211384
CADM2 cell adhesion molecule 2 -0.0210439
EXT1 exostosin glycosyltransferase 1 -0.0207678
GNAS GNAS complex locus -0.0205594
BSG basigin (Ok blood group) -0.02055
CCL5 chemokine (C-C motif) ligand 5 -0.0205267
ELL2 elongation factor, RNA polymerase II, 2 -0.0201321
PTPRM protein tyrosine phosphatase, receptor type, M -0.0195793
RPL38 ribosomal protein L38 -0.0188368
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0187335
HMGB1 high mobility group box 1 -0.0186638
EPHA5 EPH receptor A5 -0.0185602
NTN4 netrin 4 -0.018486
PDE1A phosphodiesterase 1A, calmodulin-dependent -0.0184746
PKM pyruvate kinase, muscle -0.0184031
MT2A metallothionein 2A -0.0183884
CDK12 cyclin-dependent kinase 12 -0.018355
KIAA0825 KIAA0825 -0.0182675
AKR1C1 aldo-keto reductase family 1, member C1 -0.0181265
BASP1 brain abundant, membrane attached signal protein 1 -0.0180015
FNDC3A fibronectin type III domain containing 3A -0.0178657
RPS21 ribosomal protein S21 -0.0176042
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0175015
EXOC6B exocyst complex component 6B -0.0173878
KYNU kynureninase -0.0173348
SLC38A2 solute carrier family 38, member 2 -0.0172104
RPL8 ribosomal protein L8 -0.0171265
RAB7A RAB7A, member RAS oncogene family -0.017001
RPL7A ribosomal protein L7a -0.0169947
COL5A2 collagen, type V, alpha 2 -0.0163486
FBXL17 F-box and leucine-rich repeat protein 17 -0.0163405
TFPI2 tissue factor pathway inhibitor 2 -0.0163105
LAMA1 laminin, alpha 1 -0.0162913
PRKN parkin RBR E3 ubiquitin protein ligase -0.0162469
ANXA2 annexin A2 -0.0161592
NABP1 nucleic acid binding protein 1 -0.0159713
TNPO1 transportin 1 -0.015857
LPGAT1 lysophosphatidylglycerol acyltransferase 1 -0.0158083
TUBB4B tubulin, beta 4B class IVb -0.0156793
MAP1B microtubule-associated protein 1B -0.0156278