Pravastatin (sodium)_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pravastatin (sodium) perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pravastatin (sodium)_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.212258
FNDC3B fibronectin type III domain containing 3B 0.135765
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.124747
STC1 stanniocalcin 1 0.0967999
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0954419
CD109 CD109 molecule 0.0849127
B2M beta-2-microglobulin 0.0766807
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0561188
CENPF centromere protein F, 350/400kDa 0.0553558
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0551586
POTEF POTE ankyrin domain family, member F 0.0543953
YEATS2 YEATS domain containing 2 0.0536136
EYA1 EYA transcriptional coactivator and phosphatase 1 0.0518908
MSN moesin 0.0480808
CXCL8 chemokine (C-X-C motif) ligand 8 0.0463173
PCBP2 poly(rC) binding protein 2 0.0460501
MYH9 myosin, heavy chain 9, non-muscle 0.0458383
VEGFA vascular endothelial growth factor A 0.0451893
NAMPT nicotinamide phosphoribosyltransferase 0.0434799
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0426998
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0416585
ESYT2 extended synaptotagmin-like protein 2 0.0413733
HDGF hepatoma-derived growth factor 0.0411929
ATP13A3 ATPase type 13A3 0.0411183
NBAS neuroblastoma amplified sequence 0.0408231
JARID2 jumonji, AT rich interactive domain 2 0.0404323
FAM13A family with sequence similarity 13, member A 0.0400108
BBX bobby sox homolog (Drosophila) 0.0394997
RPS12 ribosomal protein S12 0.039058
ZNF292 zinc finger protein 292 0.0390311
NUP58 nucleoporin 58 0.0379839
RPL5 ribosomal protein L5 0.0373812
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0373433
PDE4D phosphodiesterase 4D, cAMP-specific 0.0371301
ANKRD11 ankyrin repeat domain 11 0.0370448
NCKAP1 NCK-associated protein 1 0.036786
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0366306
SEPTIN7 septin 7 0.036562
RPS8 ribosomal protein S8 0.0357706
SRP54 signal recognition particle 54kDa 0.0350338
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0344425
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0339813
SFPQ splicing factor proline/glutamine-rich 0.0339044
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0338048
SETD5 SET domain containing 5 0.0337385
TENT5A terminal nucleotidyltransferase 5A 0.0336424
NAV2 neuron navigator 2 0.0330341
BCLAF1 BCL2-associated transcription factor 1 0.0325048
CBX3 chromobox homolog 3 0.0323749
NOP58 NOP58 ribonucleoprotein 0.0322419
FMNL2 formin-like 2 0.0322249
BIRC6 baculoviral IAP repeat containing 6 0.0320129
WAC WW domain containing adaptor with coiled-coil 0.0315434
LMNA lamin A/C 0.0312608
NGLY1 N-glycanase 1 0.0312534
GLS2 glutaminase 2 (liver, mitochondrial) 0.03118
CDH13 cadherin 13 0.0309901
SNX1 sorting nexin 1 0.0309713
MCTP2 multiple C2 domains, transmembrane 2 0.030875
COPA coatomer protein complex, subunit alpha 0.030759
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0306338
UBA6 ubiquitin-like modifier activating enzyme 6 0.0305257
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0305216
AMPD3 adenosine monophosphate deaminase 3 0.0302287
MMP12 matrix metallopeptidase 12 0.0299161
KTN1 kinectin 1 (kinesin receptor) 0.0297974
SERBP1 SERPINE1 mRNA binding protein 1 0.0296877
RBM39 RNA binding motif protein 39 0.0294741
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0294658
GIGYF2 GRB10 interacting GYF protein 2 0.0292382
COL5A1 collagen, type V, alpha 1 0.0292008
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0291614
MACF1 microtubule-actin crosslinking factor 1 0.0290984
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0288798
OPTN optineurin 0.0288747
XPO1 exportin 1 0.0286445
ZFP36L1 ZFP36 ring finger protein-like 1 0.028366
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0281987
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0278232
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0277771
AXL AXL receptor tyrosine kinase 0.0277176
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0276769
RPS17 ribosomal protein S17 0.0275247
HDAC9 histone deacetylase 9 0.0273644
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0273627
SOD2 superoxide dismutase 2, mitochondrial 0.0273003
APLP2 amyloid beta (A4) precursor-like protein 2 0.026969
ZNF148 zinc finger protein 148 0.0269258
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0268475
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0267637
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0267454
INSIG2 insulin induced gene 2 0.026665
RPS3 ribosomal protein S3 0.0265198
UBA2 ubiquitin-like modifier activating enzyme 2 0.0263258
USP9X ubiquitin specific peptidase 9, X-linked 0.0260948
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.0259307
LPCAT2 lysophosphatidylcholine acyltransferase 2 0.0257943
RPL37A ribosomal protein L37a 0.0256229
GOLGA4 golgin A4 0.0256124
CDK19 cyclin-dependent kinase 19 0.0255865

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.324584
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.150109
FN1 fibronectin 1 -0.147651
CD44 CD44 molecule (Indian blood group) -0.100348
FRMD4A FERM domain containing 4A -0.0773584
FTL ferritin, light polypeptide -0.0707117
H1-0 H1.0 linker histone -0.0665764
HLA-B major histocompatibility complex, class I, B -0.059762
TMSB10 thymosin beta 10 -0.0576441
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0568546
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0525243
NRP1 neuropilin 1 -0.0508401
COL1A1 collagen, type I, alpha 1 -0.0507988
LOC112694756 uncharaterized LOC112694756 -0.0505615
PTMA prothymosin, alpha -0.0505214
PSD3 pleckstrin and Sec7 domain containing 3 -0.0503515
HM13 histocompatibility (minor) 13 -0.0501838
ACTG1 actin gamma 1 -0.0479231
IER3 immediate early response 3 -0.0479008
VCL vinculin -0.0473859
COL6A2 collagen, type VI, alpha 2 -0.0462447
WSB1 WD repeat and SOCS box containing 1 -0.0430685
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0411916
ZEB1 zinc finger E-box binding homeobox 1 -0.0396362
COL4A2 collagen, type IV, alpha 2 -0.0393636
STAU1 staufen double-stranded RNA binding protein 1 -0.0391534
S100A10 S100 calcium binding protein A10 -0.0384659
HPCAL1 hippocalcin-like 1 -0.0383252
AHNAK AHNAK nucleoprotein -0.0354836
SLIT2 slit homolog 2 (Drosophila) -0.0351441
ERRFI1 ERBB receptor feedback inhibitor 1 -0.035113
NF1 neurofibromin 1 -0.034763
VDAC1 voltage-dependent anion channel 1 -0.0345486
TPT1 tumor protein, translationally-controlled 1 -0.0345139
PDIA3 protein disulfide isomerase family A, member 3 -0.034204
RAB7A RAB7A, member RAS oncogene family -0.0328572
TNNC1 troponin C type 1 (slow) -0.0326044
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0325288
TRIP12 thyroid hormone receptor interactor 12 -0.0316693
PCBP3 poly(rC) binding protein 3 -0.0316286
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0313696
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0312171
PGK1 phosphoglycerate kinase 1 -0.0311142
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0309202
RPL34 ribosomal protein L34 -0.0308115
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0307197
ARF1 ADP-ribosylation factor 1 -0.0303383
CTSB cathepsin B -0.0299095
NDRG1 N-myc downstream regulated 1 -0.0292624
MAP1B microtubule-associated protein 1B -0.0283211
SVIL supervillin -0.0282807
ARHGAP35 Rho GTPase activating protein 35 -0.027612
CANX calnexin -0.0270016
GLIS3 GLIS family zinc finger 3 -0.0269952
MAP4 microtubule-associated protein 4 -0.0269141
GNAS GNAS complex locus -0.026812
COL5A3 collagen, type V, alpha 3 -0.0262351
PKM pyruvate kinase, muscle -0.0262195
TKT transketolase -0.026153
WWTR1 WW domain containing transcription regulator 1 -0.0261471
TUBB tubulin, beta class I -0.0260947
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0259468
CLIC4 chloride intracellular channel 4 -0.0257222
RRBP1 ribosome binding protein 1 -0.025323
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0251676
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0251441
NCOA7 nuclear receptor coactivator 7 -0.0249579
MMP14 matrix metallopeptidase 14 (membrane-inserted) -0.02462
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0244931
APP amyloid beta (A4) precursor protein -0.0244149
CDK13 cyclin-dependent kinase 13 -0.0243149
TGFBR1 transforming growth factor, beta receptor 1 -0.0239658
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.023699
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0236715
CCDC47 coiled-coil domain containing 47 -0.0235424
KDM3A lysine (K)-specific demethylase 3A -0.0231971
XAF1 XIAP associated factor 1 -0.0231284
PTPRG protein tyrosine phosphatase, receptor type, G -0.0229048
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0228948
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0227057
BLZF1 basic leucine zipper nuclear factor 1 -0.0226952
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0222468
EGR1 early growth response 1 -0.0221466
HMGA2 high mobility group AT-hook 2 -0.0221217
EXT1 exostosin glycosyltransferase 1 -0.0220122
RSU1 Ras suppressor protein 1 -0.0219292
ZNF217 zinc finger protein 217 -0.0218823
TFPI2 tissue factor pathway inhibitor 2 -0.0217055
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0216751
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0215332
DLG1 discs, large homolog 1 (Drosophila) -0.0213673
RPL35A ribosomal protein L35a -0.0211065
TSPAN9 tetraspanin 9 -0.0209589
FTH1 ferritin, heavy polypeptide 1 -0.02094
SEC31A SEC31 homolog A (S. cerevisiae) -0.0209298
NCOA3 nuclear receptor coactivator 3 -0.0208057
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.020562
CAPNS1 calpain, small subunit 1 -0.0205393
ICAM1 intercellular adhesion molecule 1 -0.0204312
ANXA2 annexin A2 -0.0202312