Pravastatin (sodium)_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pravastatin (sodium) perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pravastatin (sodium)_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.123117
FLNB filamin B, beta 0.0850804
PDE4B phosphodiesterase 4B, cAMP-specific 0.0618226
PYGB phosphorylase, glycogen; brain 0.0617723
TMSB4X thymosin beta 4, X-linked 0.0587951
RPS8 ribosomal protein S8 0.0522087
CAMTA1 calmodulin binding transcription activator 1 0.0477047
ADAM10 ADAM metallopeptidase domain 10 0.0466978
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.04634
ECT2 epithelial cell transforming 2 0.0461041
PRRC2C proline-rich coiled-coil 2C 0.0460607
RPS12 ribosomal protein S12 0.0425571
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0423971
SET SET nuclear proto-oncogene 0.042293
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0422488
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0420418
KTN1 kinectin 1 (kinesin receptor) 0.0406827
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0392317
HDGF hepatoma-derived growth factor 0.0381762
SRRM2 serine/arginine repetitive matrix 2 0.0377075
GOLGA4 golgin A4 0.0362898
DLG1 discs, large homolog 1 (Drosophila) 0.0361656
PICALM phosphatidylinositol binding clathrin assembly protein 0.0356172
ANKRD36 ankyrin repeat domain 36 0.0354177
RPL26 ribosomal protein L26 0.0353634
SMC3 structural maintenance of chromosomes 3 0.0353567
ENOX1 ecto-NOX disulfide-thiol exchanger 1 0.0353194
RPS6 ribosomal protein S6 0.03517
VMP1 vacuole membrane protein 1 0.0340599
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0337675
SQSTM1 sequestosome 1 0.0334767
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0333478
TMEM41B transmembrane protein 41B 0.0331672
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0329093
RPL37A ribosomal protein L37a 0.0325348
CD47 CD47 molecule 0.0321456
SERINC1 serine incorporator 1 0.031857
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0310696
RPS3 ribosomal protein S3 0.0310071
MYOF myoferlin 0.0307495
NCEH1 neutral cholesterol ester hydrolase 1 0.0306808
WDR43 WD repeat domain 43 0.0306474
GLS2 glutaminase 2 (liver, mitochondrial) 0.0299135
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.0299114
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) 0.0298897
B2M beta-2-microglobulin 0.0297923
ASXL1 additional sex combs like transcriptional regulator 1 0.0297159
CPED1 cadherin-like and PC-esterase domain containing 1 0.0293879
TRIO trio Rho guanine nucleotide exchange factor 0.0288332
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0285987
RPL5 ribosomal protein L5 0.0283872
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0281994
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0278424
UBA6 ubiquitin-like modifier activating enzyme 6 0.0272722
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0271575
S100A6 S100 calcium binding protein A6 0.0270377
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0269434
TMF1 TATA element modulatory factor 1 0.0268067
RPS2 ribosomal protein S2 0.0266009
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0262732
PHF3 PHD finger protein 3 0.0262235
KMT2E lysine (K)-specific methyltransferase 2E 0.0258948
THOC2 THO complex 2 0.0258507
LPP LIM domain containing preferred translocation partner in lipoma 0.0254975
MXI1 MAX interactor 1, dimerization protein 0.0254795
ZBTB20 zinc finger and BTB domain containing 20 0.0252038
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0250611
ZFP36L1 ZFP36 ring finger protein-like 1 0.0247932
EEF1G eukaryotic translation elongation factor 1 gamma 0.0246574
RPL31 ribosomal protein L31 0.0244288
RBM25 RNA binding motif protein 25 0.0241581
RPL3 ribosomal protein L3 0.0240972
CASC3 cancer susceptibility candidate 3 0.023823
NCKAP1 NCK-associated protein 1 0.0236468
GIGYF2 GRB10 interacting GYF protein 2 0.0232762
RHBDD1 rhomboid domain containing 1 0.0229899
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0228936
ZNF292 zinc finger protein 292 0.0228264
NUP58 nucleoporin 58 0.0226695
DUSP4 dual specificity phosphatase 4 0.022112
USP24 ubiquitin specific peptidase 24 0.0220621
PCBP2 poly(rC) binding protein 2 0.0220066
IWS1 IWS1 homolog (S. cerevisiae) 0.0211912
RNF145 ring finger protein 145 0.0208474
AKAP9 A kinase (PRKA) anchor protein 9 0.020749
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) 0.0207139
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0205947
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0205231
LOXL3 lysyl oxidase-like 3 0.0204386
SLTM SAFB-like, transcription modulator 0.0204049
NKTR natural killer cell triggering receptor 0.0203332
TMEM65 transmembrane protein 65 0.0201367
PNN pinin, desmosome associated protein 0.0200613
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0199673
ZNHIT6 zinc finger, HIT-type containing 6 0.0196518
KMT2C lysine (K)-specific methyltransferase 2C 0.0196239
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0195864
ATP13A3 ATPase type 13A3 0.0195058
MYO5A myosin VA (heavy chain 12, myoxin) 0.019354
SCAF8 SR-related CTD-associated factor 8 0.0192809

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.586325
ACTG1 actin gamma 1 -0.111386
TPT1 tumor protein, translationally-controlled 1 -0.0701581
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0686745
LOC112694756 uncharaterized LOC112694756 -0.0671209
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0625251
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0519979
RHOA ras homolog family member A -0.0471638
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0462665
FOXP1 forkhead box P1 -0.046043
RPL35A ribosomal protein L35a -0.0450586
BMP10 bone morphogenetic protein 10 -0.044493
PKM pyruvate kinase, muscle -0.0441969
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0438915
RBM39 RNA binding motif protein 39 -0.0431049
FUS FUS RNA binding protein -0.039133
HDLBP high density lipoprotein binding protein -0.0371667
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0371094
IFI16 interferon, gamma-inducible protein 16 -0.0369527
RPL13A ribosomal protein L13a -0.0339401
RPS23 ribosomal protein S23 -0.0335607
RPL8 ribosomal protein L8 -0.0332448
ZMYND8 zinc finger, MYND-type containing 8 -0.0329918
RPL34 ribosomal protein L34 -0.0327936
STAU1 staufen double-stranded RNA binding protein 1 -0.03198
RPLP0 ribosomal protein, large, P0 -0.0316411
KPNB1 karyopherin (importin) beta 1 -0.0313007
PRDX2 peroxiredoxin 2 -0.0308337
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.030639
RPS11 ribosomal protein S11 -0.0293484
IARS1 isoleucyl-tRNA synthetase 1 -0.0291019
VDAC1 voltage-dependent anion channel 1 -0.0282354
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0279702
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0276422
SMC4 structural maintenance of chromosomes 4 -0.0275669
RPS15 ribosomal protein S15 -0.027035
ARL4C ADP-ribosylation factor-like 4C -0.0269936
PDE4D phosphodiesterase 4D, cAMP-specific -0.0265616
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0261509
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0259592
PFN1 profilin 1 -0.0258893
RRBP1 ribosome binding protein 1 -0.0258835
WSB1 WD repeat and SOCS box containing 1 -0.0254757
CCND1 cyclin D1 -0.0254158
RIGI RNA sensor RIG-I -0.0253258
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0249044
SSBP2 single-stranded DNA binding protein 2 -0.0246723
ZNFX1 zinc finger, NFX1-type containing 1 -0.024662
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.024192
SP100 SP100 nuclear antigen -0.0236056
RPL32 ribosomal protein L32 -0.0235082
RPL19 ribosomal protein L19 -0.0231217
RPL12 ribosomal protein L12 -0.0230618
S100A10 S100 calcium binding protein A10 -0.0227013
PDIA3 protein disulfide isomerase family A, member 3 -0.0226423
FUBP1 far upstream element (FUSE) binding protein 1 -0.0222276
RPS19 ribosomal protein S19 -0.022032
EEF2 eukaryotic translation elongation factor 2 -0.0215645
PSIP1 PC4 and SFRS1 interacting protein 1 -0.0215495
HMGA1 high mobility group AT-hook 1 -0.0215355
LDHA lactate dehydrogenase A -0.0214481
SDK1 sidekick cell adhesion molecule 1 -0.0211266
PDGFC platelet derived growth factor C -0.0209681
KDM3A lysine (K)-specific demethylase 3A -0.0208259
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) -0.0207911
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0205559
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0203342
HMGB1 high mobility group box 1 -0.0203199
FNDC3B fibronectin type III domain containing 3B -0.0202641
SEPTIN11 septin 11 -0.0201984
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0201472
TM4SF1 transmembrane 4 L six family member 1 -0.0200927
CALR calreticulin -0.0200241
RPL27A ribosomal protein L27a -0.0199705
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0199412
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0195789
IL6ST interleukin 6 signal transducer -0.0195472
TXNIP thioredoxin interacting protein -0.0193594
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0191591
CANX calnexin -0.0187826
PGK1 phosphoglycerate kinase 1 -0.0186758
SCAF11 SR-related CTD-associated factor 11 -0.0186168
ZFAND3 zinc finger, AN1-type domain 3 -0.0186092
RPL21 ribosomal protein L21 -0.0185519
MKI67 marker of proliferation Ki-67 -0.0184338
CALU calumenin -0.0182023
BICD1 bicaudal D homolog 1 (Drosophila) -0.0181898
JUN jun proto-oncogene -0.0181326
HSPA4L heat shock 70kDa protein 4-like -0.0180514
RPS21 ribosomal protein S21 -0.0179919
RPS16 ribosomal protein S16 -0.0179884
TUBB tubulin, beta class I -0.0179752
TMSB10 thymosin beta 10 -0.0179284
POTEF POTE ankyrin domain family, member F -0.0179217
RPL7A ribosomal protein L7a -0.0178841
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0178755
GMDS GDP-mannose 4,6-dehydratase -0.0177625
RPLP2 ribosomal protein, large, P2 -0.0177532
DIAPH2 diaphanous-related formin 2 -0.0174676
FKBP10 FK506 binding protein 10, 65 kDa -0.0174516