Pravastatin (sodium)_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pravastatin (sodium) perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pravastatin (sodium)_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0776806
PTMA prothymosin, alpha 0.0640998
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0640042
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0606274
KRT18 keratin 18, type I 0.04829
PGK1 phosphoglycerate kinase 1 0.0461478
RPL12 ribosomal protein L12 0.0437631
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0437148
CD46 CD46 molecule, complement regulatory protein 0.0401778
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0395873
AKAP12 A kinase (PRKA) anchor protein 12 0.0394371
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0378492
RPS3 ribosomal protein S3 0.0366013
CD47 CD47 molecule 0.0349404
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0348235
RPL37A ribosomal protein L37a 0.033957
KRT19 keratin 19, type I 0.0329948
RPS21 ribosomal protein S21 0.0316981
UBA6 ubiquitin-like modifier activating enzyme 6 0.03154
BZW1 basic leucine zipper and W2 domains 1 0.0311406
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0306224
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0305841
RNF149 ring finger protein 149 0.0302624
AFDN afadin, adherens junction formation factor 0.0300996
UBE2C ubiquitin-conjugating enzyme E2C 0.0300455
PLAUR plasminogen activator, urokinase receptor 0.0297966
RPL27A ribosomal protein L27a 0.0290432
RPS6 ribosomal protein S6 0.0285247
RPL18 ribosomal protein L18 0.028149
OGA O-GlcNAcase 0.0280041
HOXB6 homeobox B6 0.0275467
RPL19 ribosomal protein L19 0.0272515
FRMD5 FERM domain containing 5 0.0270649
RPS17 ribosomal protein S17 0.0270644
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0268217
ANKRD10 ankyrin repeat domain 10 0.0264282
GPBP1 GC-rich promoter binding protein 1 0.0262323
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0258978
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0258334
CBX3 chromobox homolog 3 0.0254407
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0253527
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0252485
MSI2 musashi RNA-binding protein 2 0.0249016
MED13L mediator complex subunit 13-like 0.02477
RPS8 ribosomal protein S8 0.024299
THOC2 THO complex 2 0.0241493
ESYT2 extended synaptotagmin-like protein 2 0.0238147
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0232174
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 0.0231142
B2M beta-2-microglobulin 0.0229134
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0226378
CASC3 cancer susceptibility candidate 3 0.0223729
RBM25 RNA binding motif protein 25 0.022297
RYK receptor-like tyrosine kinase 0.022211
RPLP0 ribosomal protein, large, P0 0.0219842
ZBTB7A zinc finger and BTB domain containing 7A 0.0219598
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0218987
RREB1 ras responsive element binding protein 1 0.0218066
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.0214955
WAC WW domain containing adaptor with coiled-coil 0.0211785
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.021081
FAM3C family with sequence similarity 3, member C 0.0207424
USP3 ubiquitin specific peptidase 3 0.0206596
PHC3 polyhomeotic homolog 3 (Drosophila) 0.020557
FAT1 FAT atypical cadherin 1 0.020414
BAIAP2L1 BAI1-associated protein 2-like 1 0.0202499
PTBP2 polypyrimidine tract binding protein 2 0.0202058
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0200817
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0200736
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0199974
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0196997
MAT2A methionine adenosyltransferase II, alpha 0.0196862
NCKAP1 NCK-associated protein 1 0.019553
ITPRID2 ITPR interacting domain containing 2 0.0195184
ITCH itchy E3 ubiquitin protein ligase 0.0193741
TMSB4X thymosin beta 4, X-linked 0.0192488
RPS2 ribosomal protein S2 0.0192405
PATL1 protein associated with topoisomerase II homolog 1 (yeast) 0.0192376
RAD23B RAD23 homolog B (S. cerevisiae) 0.0191019
ZFR zinc finger RNA binding protein 0.0189627
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0187642
MKRN1 makorin ring finger protein 1 0.0187027
HSPA8 heat shock 70kDa protein 8 0.0185339
RPLP1 ribosomal protein, large, P1 0.018409
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 0.0183705
RPL26 ribosomal protein L26 0.0182601
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0180845
CTNND1 catenin (cadherin-associated protein), delta 1 0.0179365
SEPTIN2 septin 2 0.0179268
ZNF326 zinc finger protein 326 0.0176871
ONECUT3 one cut homeobox 3 0.0172704
CKAP5 cytoskeleton associated protein 5 0.017268
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0170777
TMED2 transmembrane emp24 domain trafficking protein 2 0.0170494
SP3 Sp3 transcription factor 0.0170312
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0167741
FN1 fibronectin 1 0.0167232
EFR3A EFR3 homolog A (S. cerevisiae) 0.0167118
RPS27 ribosomal protein S27 0.0166285
COX6C cytochrome c oxidase subunit VIc 0.0164913

decreased expression

Symbol Name Standardized Value
UBC ubiquitin C -0.24903
TMSB10 thymosin beta 10 -0.16058
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.151701
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.146633
IFRD1 interferon-related developmental regulator 1 -0.105054
EEF2 eukaryotic translation elongation factor 2 -0.094933
NCEH1 neutral cholesterol ester hydrolase 1 -0.094898
RPS27A ribosomal protein S27a -0.0862582
JUN jun proto-oncogene -0.0817546
KRT8 keratin 8, type II -0.0786773
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0773096
RAB7A RAB7A, member RAS oncogene family -0.0750355
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0714035
LOC112694756 uncharaterized LOC112694756 -0.0702919
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0702273
EZR ezrin -0.0695197
GNAS GNAS complex locus -0.0673229
FTH1 ferritin, heavy polypeptide 1 -0.0671308
ACTG1 actin gamma 1 -0.0625974
NEBL nebulette -0.0583784
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0575763
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0571384
PCBP2 poly(rC) binding protein 2 -0.0564459
ANXA2 annexin A2 -0.0558258
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0542434
PDIA3 protein disulfide isomerase family A, member 3 -0.0541714
ADNP activity-dependent neuroprotector homeobox -0.0533225
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0519175
EGR1 early growth response 1 -0.0517076
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0514141
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0507823
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0504756
ZBTB20 zinc finger and BTB domain containing 20 -0.0501832
FTL ferritin, light polypeptide -0.0500303
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.049745
LOC102724023 ES1 protein homolog, mitochondrial -0.0497099
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0480306
PKM pyruvate kinase, muscle -0.0474358
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0472147
FLNA filamin A, alpha -0.0469141
CSNK1A1 casein kinase 1, alpha 1 -0.0458104
EMP1 epithelial membrane protein 1 -0.045268
GOLGB1 golgin B1 -0.0449671
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0447053
BZW2 basic leucine zipper and W2 domains 2 -0.0446189
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0444423
FUS FUS RNA binding protein -0.0439772
PCSK5 proprotein convertase subtilisin/kexin type 5 -0.0438198
IARS1 isoleucyl-tRNA synthetase 1 -0.0436627
SPDYA speedy/RINGO cell cycle regulator family member A -0.0431818
ZMYND8 zinc finger, MYND-type containing 8 -0.0428081
MYO1E myosin IE -0.0415708
ZNFX1 zinc finger, NFX1-type containing 1 -0.0415053
ARHGAP26 Rho GTPase activating protein 26 -0.0407889
ACTN4 actinin, alpha 4 -0.0402851
CEMIP2 cell migration inducing hyaluronidase 2 -0.0401274
CEMIP cell migration inducing protein, hyaluronan binding -0.0399542
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0398378
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0388172
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0381399
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0380104
OXSR1 oxidative stress responsive 1 -0.0374192
YAP1 Yes-associated protein 1 -0.0364886
CALU calumenin -0.0357146
PCLO piccolo presynaptic cytomatrix protein -0.035615
AHNAK AHNAK nucleoprotein -0.0355313
GMDS GDP-mannose 4,6-dehydratase -0.0354155
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0351522
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0351426
CADPS Ca++-dependent secretion activator -0.0349845
MAML2 mastermind-like 2 (Drosophila) -0.0347499
CDK13 cyclin-dependent kinase 13 -0.0347419
RBM39 RNA binding motif protein 39 -0.0344789
POTEF POTE ankyrin domain family, member F -0.0342464
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0341519
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0341411
PDIA4 protein disulfide isomerase family A, member 4 -0.0340791
NCOA3 nuclear receptor coactivator 3 -0.0337834
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0335317
UBE2D1 ubiquitin-conjugating enzyme E2D 1 -0.0335067
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0330848
VMP1 vacuole membrane protein 1 -0.0330794
TXNRD1 thioredoxin reductase 1 -0.0330768
USP34 ubiquitin specific peptidase 34 -0.0330156
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0327852
RNF213 ring finger protein 213 -0.0327512
CCND1 cyclin D1 -0.03254
JMJD1C jumonji domain containing 1C -0.0319897
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0318528
RAB5A RAB5A, member RAS oncogene family -0.0317073
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0313671
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0312649
TXNIP thioredoxin interacting protein -0.031193
PLSCR1 phospholipid scramblase 1 -0.030587
RHOA ras homolog family member A -0.0305805
SFPQ splicing factor proline/glutamine-rich -0.0305005
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0299985
GLG1 golgi glycoprotein 1 -0.0299215
AMOTL2 angiomotin like 2 -0.0296553
STAU1 staufen double-stranded RNA binding protein 1 -0.0296398