Procainamide (hydrochloride)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Procainamide (hydrochloride) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Procainamide (hydrochloride)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZEB1 zinc finger E-box binding homeobox 1 0.100718
STC1 stanniocalcin 1 0.100505
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0809461
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0714289
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0582057
TXNRD1 thioredoxin reductase 1 0.0542318
AHNAK AHNAK nucleoprotein 0.0525048
USP3 ubiquitin specific peptidase 3 0.0510469
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.046844
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0445018
STK4 serine/threonine kinase 4 0.0423541
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0415031
PTBP2 polypyrimidine tract binding protein 2 0.0408036
RPL23 ribosomal protein L23 0.0406307
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0388
MKI67 marker of proliferation Ki-67 0.037817
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0375559
ENO1 enolase 1, (alpha) 0.0367259
NCKAP1 NCK-associated protein 1 0.0342329
CDK17 cyclin-dependent kinase 17 0.0336027
PNISR PNN-interacting serine/arginine-rich protein 0.0333148
RPL26 ribosomal protein L26 0.0331557
MTAP methylthioadenosine phosphorylase 0.0328947
BZW1 basic leucine zipper and W2 domains 1 0.0327016
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0323002
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0322265
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0312701
FAR1 fatty acyl CoA reductase 1 0.0305601
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0303978
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0303819
ATP13A3 ATPase type 13A3 0.0301201
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0291898
FHL2 four and a half LIM domains 2 0.0291187
S100A2 S100 calcium binding protein A2 0.0290577
KIF5B kinesin family member 5B 0.0290064
G2E3 G2/M-phase specific E3 ubiquitin protein ligase 0.0288914
TPX2 TPX2, microtubule-associated 0.0286291
RAD21 RAD21 homolog (S. pombe) 0.0284934
CHD1 chromodomain helicase DNA binding protein 1 0.0284739
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0280325
EIF3H eukaryotic translation initiation factor 3, subunit H 0.027389
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0272801
FXR1 fragile X mental retardation, autosomal homolog 1 0.0272098
TEX10 testis expressed 10 0.0271294
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0269936
CTTNBP2NL CTTNBP2 N-terminal like 0.0269233
ZNFX1 zinc finger, NFX1-type containing 1 0.0268143
CAPN2 calpain 2, (m/II) large subunit 0.0266814
ADAM17 ADAM metallopeptidase domain 17 0.0265322
WDR43 WD repeat domain 43 0.0264465
ZC3H12B zinc finger CCCH-type containing 12B 0.0263863
RPL12 ribosomal protein L12 0.026339
C2CD2 C2 calcium-dependent domain containing 2 0.0262368
CDC73 cell division cycle 73 0.0261272
MTF2 metal response element binding transcription factor 2 0.0261185
RBM39 RNA binding motif protein 39 0.0261084
ECT2 epithelial cell transforming 2 0.0260477
RASA2 RAS p21 protein activator 2 0.0256416
RPL11 ribosomal protein L11 0.0256403
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.0254407
MTPN myotrophin 0.0250967
CKAP5 cytoskeleton associated protein 5 0.0248342
PGK1 phosphoglycerate kinase 1 0.0247718
OTUD4 OTU deubiquitinase 4 0.0247146
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0246776
RPL21 ribosomal protein L21 0.0245533
SNX9 sorting nexin 9 0.0243381
NAMPT nicotinamide phosphoribosyltransferase 0.0237506
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0237309
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0237005
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0236209
YME1L1 YME1-like 1 ATPase 0.0232577
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0230439
TOMM34 translocase of outer mitochondrial membrane 34 0.0228743
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0228263
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0227922
KDM1A lysine (K)-specific demethylase 1A 0.0226698
ECPAS Ecm29 proteasome adaptor and scaffold 0.0225782
PALS2 protein associated with LIN7 2, MAGUK p55 family member 0.0223897
NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 0.0223687
H1-4 H1.4 linker histone, cluster member 0.022232
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0220123
G0S2 G0/G1 switch 2 0.021996
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0219475
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0219457
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0219151
KAT6A K(lysine) acetyltransferase 6A 0.0218171
SLC35F2 solute carrier family 35, member F2 0.0218105
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 0.0214568
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0212947
RPL5 ribosomal protein L5 0.0212722
PTCD3 pentatricopeptide repeat domain 3 0.0211971
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0211657
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0210647
ABI1 abl-interactor 1 0.0210474
RPS2 ribosomal protein S2 0.0210403
USP9X ubiquitin specific peptidase 9, X-linked 0.0210378
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H 0.0209519
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.020808
FIP1L1 factor interacting with PAPOLA and CPSF1 0.0207668

decreased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 -0.231108
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.156841
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.156397
DLC1 DLC1 Rho GTPase activating protein -0.146135
FRMD6 FERM domain containing 6 -0.126587
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.113105
FLNB filamin B, beta -0.105998
IARS1 isoleucyl-tRNA synthetase 1 -0.100127
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0980843
FRMD4A FERM domain containing 4A -0.0960659
TRIO trio Rho guanine nucleotide exchange factor -0.0956659
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.091764
EEF2 eukaryotic translation elongation factor 2 -0.0883992
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0795518
NAV3 neuron navigator 3 -0.0792236
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0787382
ZNF438 zinc finger protein 438 -0.0779293
FTL ferritin, light polypeptide -0.0777499
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0763482
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0712678
PBX3 pre-B-cell leukemia homeobox 3 -0.0712434
MCTP1 multiple C2 domains, transmembrane 1 -0.0711316
P4HB prolyl 4-hydroxylase, beta polypeptide -0.070218
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0663568
GOLGA4 golgin A4 -0.0656507
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0628958
PDIA3 protein disulfide isomerase family A, member 3 -0.0604764
SRRM2 serine/arginine repetitive matrix 2 -0.0600767
LPP LIM domain containing preferred translocation partner in lipoma -0.058805
NDRG1 N-myc downstream regulated 1 -0.0586417
RAB7A RAB7A, member RAS oncogene family -0.0581249
NABP1 nucleic acid binding protein 1 -0.0581182
CALD1 caldesmon 1 -0.0555949
BNC2 basonuclin 2 -0.0554598
SAMD4A sterile alpha motif domain containing 4A -0.0527976
FNIP1 folliculin interacting protein 1 -0.0525743
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.051732
ZBTB20 zinc finger and BTB domain containing 20 -0.0515905
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0514532
DENND1A DENN/MADD domain containing 1A -0.0481745
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0477976
JMJD1C jumonji domain containing 1C -0.0471932
PCNX4 pecanex 4 -0.0467862
KTN1 kinectin 1 (kinesin receptor) -0.046128
CANX calnexin -0.0449724
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0446316
SLC38A2 solute carrier family 38, member 2 -0.0430088
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0422765
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0410212
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0405281
CUX1 cut-like homeobox 1 -0.0401321
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0391146
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0389011
CAST calpastatin -0.0388928
INTS6 integrator complex subunit 6 -0.0384007
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0380543
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0380441
AKAP9 A kinase (PRKA) anchor protein 9 -0.037886
ENO2 enolase 2 (gamma, neuronal) -0.0375973
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.036515
RPL35A ribosomal protein L35a -0.0364825
CALU calumenin -0.0360298
ANKRD17 ankyrin repeat domain 17 -0.0358042
MROH1 maestro heat-like repeat family member 1 -0.035599
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0354056
SEC24A SEC24 family member A -0.0353681
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0353413
COL27A1 collagen, type XXVII, alpha 1 -0.035265
KDM4C lysine (K)-specific demethylase 4C -0.0349472
DGKI diacylglycerol kinase, iota -0.0348926
RPS6 ribosomal protein S6 -0.0348925
AP1AR adaptor-related protein complex 1 associated regulatory protein -0.0347717
WSB1 WD repeat and SOCS box containing 1 -0.0347352
XPC xeroderma pigmentosum, complementation group C -0.0346788
ERCC1 excision repair cross-complementation group 1 -0.0346141
HM13 histocompatibility (minor) 13 -0.0345828
SEC16A SEC16 homolog A (S. cerevisiae) -0.0345802
OSBPL8 oxysterol binding protein-like 8 -0.0342576
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 -0.034155
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0340646
BTBD9 BTB (POZ) domain containing 9 -0.033897
LATS2 large tumor suppressor kinase 2 -0.0338814
EGR1 early growth response 1 -0.0336462
FNDC3B fibronectin type III domain containing 3B -0.0334146
KPNB1 karyopherin (importin) beta 1 -0.033056
TTC3 tetratricopeptide repeat domain 3 -0.0330218
CREB5 cAMP responsive element binding protein 5 -0.0329498
HLA-A major histocompatibility complex, class I, A -0.0319541
ARHGAP22 Rho GTPase activating protein 22 -0.0316858
RRBP1 ribosome binding protein 1 -0.0314394
PRKCE protein kinase C, epsilon -0.0313984
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0313699
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0310196
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0308795
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme -0.0307497
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 -0.0304182
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0303786
RAD51B RAD51 paralog B -0.0303768
PARD3 par-3 family cell polarity regulator -0.0303075
MTDH metadherin -0.0300838