Proglumide_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Proglumide perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Proglumide_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DDIT4 DNA-damage-inducible transcript 4 0.0833588
TF transferrin 0.0777629
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0714701
ACSL4 acyl-CoA synthetase long-chain family member 4 0.0690855
DTNA dystrobrevin, alpha 0.0679348
VEGFA vascular endothelial growth factor A 0.0575844
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0553068
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0552513
RPL11 ribosomal protein L11 0.0547461
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0540881
BHLHE40 basic helix-loop-helix family, member e40 0.0539619
ERRFI1 ERBB receptor feedback inhibitor 1 0.0520281
RPS12 ribosomal protein S12 0.0513343
RPL26 ribosomal protein L26 0.0513236
KMT2C lysine (K)-specific methyltransferase 2C 0.0508553
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0487744
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0486481
QKI QKI, KH domain containing, RNA binding 0.0478781
ZNF292 zinc finger protein 292 0.0470854
CRY1 cryptochrome circadian clock 1 0.0460174
CPE carboxypeptidase E 0.0446195
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0443247
RPS8 ribosomal protein S8 0.0437447
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.0436213
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0431902
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.04177
SPAG9 sperm associated antigen 9 0.0417255
RBM39 RNA binding motif protein 39 0.0416922
RPS14 ribosomal protein S14 0.0416742
NAP1L1 nucleosome assembly protein 1-like 1 0.0403323
GRK3 G protein-coupled receptor kinase 3 0.0402896
RPL21 ribosomal protein L21 0.0398968
RRBP1 ribosome binding protein 1 0.0383262
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.038103
RACK1 receptor for activated C kinase 1 0.0380683
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0365211
UBA6 ubiquitin-like modifier activating enzyme 6 0.0356085
TRIO trio Rho guanine nucleotide exchange factor 0.03552
RNF149 ring finger protein 149 0.0353813
GOLGA4 golgin A4 0.0350847
PTMA prothymosin, alpha 0.0349792
BIRC3 baculoviral IAP repeat containing 3 0.0325072
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 0.0324415
PER2 period circadian clock 2 0.0319222
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0318301
RAB6A RAB6A, member RAS oncogene family 0.0312275
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0302286
FAM162A family with sequence similarity 162, member A 0.0301625
VMP1 vacuole membrane protein 1 0.030102
FXR1 fragile X mental retardation, autosomal homolog 1 0.0299679
ELL2 elongation factor, RNA polymerase II, 2 0.0299128
ESYT2 extended synaptotagmin-like protein 2 0.0298453
NUP58 nucleoporin 58 0.0295993
PTPRK protein tyrosine phosphatase, receptor type, K 0.0295454
ZMYM2 zinc finger, MYM-type 2 0.0291188
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0289667
EIF5B eukaryotic translation initiation factor 5B 0.0287882
PDE10A phosphodiesterase 10A 0.0287536
RPS2 ribosomal protein S2 0.0286928
MYO1B myosin IB 0.0281453
GK glycerol kinase 0.0279323
SOD2 superoxide dismutase 2, mitochondrial 0.027887
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0276786
HDGF hepatoma-derived growth factor 0.0274968
NOTUM notum pectinacetylesterase homolog (Drosophila) 0.0274588
NAMPT nicotinamide phosphoribosyltransferase 0.0274449
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0272631
FMNL2 formin-like 2 0.0270441
TRIM26 tripartite motif containing 26 0.0267562
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0267227
RPL37A ribosomal protein L37a 0.0266389
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0266177
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme 0.0263798
WDR45B WD repeat domain 45B 0.0262925
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0262339
RLF rearranged L-myc fusion 0.0262229
UBE2H ubiquitin-conjugating enzyme E2H 0.0261873
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0261801
CLU clusterin 0.0258977
APOH apolipoprotein H (beta-2-glycoprotein I) 0.0257158
EIF4B eukaryotic translation initiation factor 4B 0.0256294
ZNF207 zinc finger protein 207 0.0252301
TCIM transcriptional and immune response regulator 0.0252158
AFDN afadin, adherens junction formation factor 0.0252046
RPS11 ribosomal protein S11 0.0247585
SIK3 SIK family kinase 3 0.0244206
CSNK1A1 casein kinase 1, alpha 1 0.0242969
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0242886
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0242592
RAB10 RAB10, member RAS oncogene family 0.024025
CASC3 cancer susceptibility candidate 3 0.023983
PTPRM protein tyrosine phosphatase, receptor type, M 0.0239074
PDE8A phosphodiesterase 8A 0.0236962
KTN1 kinectin 1 (kinesin receptor) 0.0234965
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0233903
TNRC6B trinucleotide repeat containing 6B 0.0231032
CCL20 chemokine (C-C motif) ligand 20 0.0229804
FTH1 ferritin, heavy polypeptide 1 0.0227588
STK17A serine/threonine kinase 17a 0.0227178
SETD5 SET domain containing 5 0.0225855

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.194428
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.167783
AKAP12 A kinase (PRKA) anchor protein 12 -0.133934
IGF2 insulin-like growth factor 2 -0.124823
MT2A metallothionein 2A -0.109918
SLC38A2 solute carrier family 38, member 2 -0.107607
GPC6 glypican 6 -0.0907492
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0853223
EHBP1 EH domain binding protein 1 -0.0687239
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0674269
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0610917
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0573388
FOXP1 forkhead box P1 -0.056847
DLC1 DLC1 Rho GTPase activating protein -0.0540228
IGFBP1 insulin-like growth factor binding protein 1 -0.0513998
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0502583
STAT1 signal transducer and activator of transcription 1, 91kDa -0.049135
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0481051
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.047
VCL vinculin -0.0466699
HMGA1 high mobility group AT-hook 1 -0.045291
PEG3 paternally expressed 3 -0.0445205
DOCK4 dedicator of cytokinesis 4 -0.0428245
FRMD5 FERM domain containing 5 -0.0420523
EEF2 eukaryotic translation elongation factor 2 -0.0415192
ITGB5 integrin, beta 5 -0.0413792
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0412527
RUNX1 runt-related transcription factor 1 -0.0403242
NRIP1 nuclear receptor interacting protein 1 -0.0391969
TMSB10 thymosin beta 10 -0.0389871
MAML2 mastermind-like 2 (Drosophila) -0.0383415
CNKSR3 CNKSR family member 3 -0.0375671
SMYD3 SET and MYND domain containing 3 -0.0373281
JAG1 jagged 1 -0.0370027
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.036668
ZSWIM5 zinc finger, SWIM-type containing 5 -0.0364471
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0359819
MARCHF7 membrane associated ring-CH-type finger 7 -0.035393
TRAM1 translocation associated membrane protein 1 -0.0353662
FAT1 FAT atypical cadherin 1 -0.0339627
ATXN1 ataxin 1 -0.0333907
KDM7A lysine (K)-specific demethylase 7A -0.0332703
AOPEP aminopeptidase O (putative) -0.032861
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0325001
ARL5B ADP-ribosylation factor-like 5B -0.0320536
SERBP1 SERPINE1 mRNA binding protein 1 -0.0320126
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0318934
ATP10A ATPase, class V, type 10A -0.0318771
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0316542
CEMIP2 cell migration inducing hyaluronidase 2 -0.0313993
LAP3 leucine aminopeptidase 3 -0.0313126
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.031082
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0307835
NPAS2 neuronal PAS domain protein 2 -0.0307699
PRKCA protein kinase C, alpha -0.0302521
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.0301522
ADGRG6 adhesion G protein-coupled receptor G6 -0.0299726
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0299367
PGK1 phosphoglycerate kinase 1 -0.0298367
RPS5 ribosomal protein S5 -0.029826
SMAD3 SMAD family member 3 -0.0298152
ARFGEF3 ARFGEF family member 3 -0.0297501
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.0293482
ANKRD11 ankyrin repeat domain 11 -0.029227
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0291555
JMJD1C jumonji domain containing 1C -0.0289936
PDE4D phosphodiesterase 4D, cAMP-specific -0.0285093
ZBTB20 zinc finger and BTB domain containing 20 -0.028432
KRT8 keratin 8, type II -0.028356
TMEM50A transmembrane protein 50A -0.0280214
IGF1R insulin-like growth factor 1 receptor -0.0279848
RPS19 ribosomal protein S19 -0.0279737
AMBP alpha-1-microglobulin/bikunin precursor -0.027972
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 -0.0279619
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0279303
FOXN3 forkhead box N3 -0.0279068
PARD3 par-3 family cell polarity regulator -0.0278827
ACTN4 actinin, alpha 4 -0.0278575
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0274483
CFB complement factor B -0.0273231
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0272714
C3 complement component 3 -0.0272116
UBASH3B ubiquitin associated and SH3 domain containing B -0.0271654
MT1X metallothionein 1X -0.0262962
PAWR PRKC, apoptosis, WT1, regulator -0.0261449
LPIN2 lipin 2 -0.0260671
LCOR ligand dependent nuclear receptor corepressor -0.0257048
SOX4 SRY (sex determining region Y)-box 4 -0.0254158
ZMYND8 zinc finger, MYND-type containing 8 -0.0251058
RELL1 RELT-like 1 -0.0250037
SORBS1 sorbin and SH3 domain containing 1 -0.0249879
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0248705
GLRX glutaredoxin (thioltransferase) -0.024835
WASF2 WAS protein family, member 2 -0.0246662
ASPH aspartate beta-hydroxylase -0.0244465
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 -0.0244023
FERMT1 fermitin family member 1 -0.02424
PHF14 PHD finger protein 14 -0.0240833
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0240442
LOC112694756 uncharaterized LOC112694756 -0.0239147