Proglumide_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Proglumide perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Proglumide_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNIP thioredoxin interacting protein 0.134616
NDRG1 N-myc downstream regulated 1 0.1066
FAM13A family with sequence similarity 13, member A 0.0894752
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0856583
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0851276
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0801383
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0606539
ESYT2 extended synaptotagmin-like protein 2 0.0606167
VEGFA vascular endothelial growth factor A 0.0581287
FLNB filamin B, beta 0.0558596
UBA6 ubiquitin-like modifier activating enzyme 6 0.0543062
VMP1 vacuole membrane protein 1 0.0540843
CALB1 calbindin 1, 28kDa 0.0477173
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0458552
PTEN phosphatase and tensin homolog 0.04482
CCNY cyclin Y 0.0379025
PPARG peroxisome proliferator-activated receptor gamma 0.0378493
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0365667
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0342373
CDK19 cyclin-dependent kinase 19 0.0329916
PRELID2 PRELI domain containing 2 0.0327943
PTPRR protein tyrosine phosphatase, receptor type, R 0.0323114
EXOC1 exocyst complex component 1 0.0298814
LIMA1 LIM domain and actin binding 1 0.0294539
TNS4 tensin 4 0.0292136
ITPRID2 ITPR interacting domain containing 2 0.0287513
ABHD2 abhydrolase domain containing 2 0.0284702
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0282695
ANTXR2 anthrax toxin receptor 2 0.0278079
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0274995
CD46 CD46 molecule, complement regulatory protein 0.0274968
RIC1 RAB6A GEF complex partner 1 0.0271485
PTBP3 polypyrimidine tract binding protein 3 0.0270745
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor 0.0270736
SUCO SUN domain containing ossification factor 0.0269449
KDM6A lysine (K)-specific demethylase 6A 0.0265908
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0255897
MXD1 MAX dimerization protein 1 0.0253879
SETD5 SET domain containing 5 0.0253715
KLF3 Kruppel-like factor 3 (basic) 0.0249608
RPL21 ribosomal protein L21 0.0247233
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0236771
ZFP36 ZFP36 ring finger protein 0.0231608
CCDC186 coiled-coil domain containing 186 0.0228637
ANKRD12 ankyrin repeat domain 12 0.0227007
CD47 CD47 molecule 0.022328
KAT6B K(lysine) acetyltransferase 6B 0.0223111
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0222093
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0221823
KTN1 kinectin 1 (kinesin receptor) 0.0220686
ENO1 enolase 1, (alpha) 0.0214324
ADD3 adducin 3 (gamma) 0.021257
MXI1 MAX interactor 1, dimerization protein 0.0210015
RNF149 ring finger protein 149 0.0207681
ATP11B ATPase, class VI, type 11B 0.0206284
GOLGA4 golgin A4 0.0204618
PLAUR plasminogen activator, urokinase receptor 0.020458
DSPP dentin sialophosphoprotein 0.0203942
ZNF292 zinc finger protein 292 0.0203486
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 0.0200983
SLK STE20-like kinase 0.0200609
KAZN kazrin, periplakin interacting protein 0.0199792
ARHGAP29 Rho GTPase activating protein 29 0.0196848
ZNF638 zinc finger protein 638 0.0196325
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0196055
GCC2 GRIP and coiled-coil domain containing 2 0.0195588
PCBP2 poly(rC) binding protein 2 0.019337
SBF2 SET binding factor 2 0.0191245
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.0191232
CENPF centromere protein F, 350/400kDa 0.0188874
CDCP1 CUB domain containing protein 1 0.0188828
KMT2C lysine (K)-specific methyltransferase 2C 0.0188399
RNF217 ring finger protein 217 0.0186432
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0185794
FNBP1L formin binding protein 1-like 0.0184288
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.0182772
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.0182344
DDB2 damage-specific DNA binding protein 2, 48kDa 0.0181837
CLDN7 claudin 7 0.0181823
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0180968
FOSL1 FOS-like antigen 1 0.0180259
N4BP1 NEDD4 binding protein 1 0.0179976
PRSS3 protease, serine, 3 0.0177329
SCFD1 sec1 family domain containing 1 0.0176094
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 0.017587
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0175837
INSIG1 insulin induced gene 1 0.0175639
TMF1 TATA element modulatory factor 1 0.0175425
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.017476
PICALM phosphatidylinositol binding clathrin assembly protein 0.0174622
COG6 component of oligomeric golgi complex 6 0.017449
MRPS6 mitochondrial ribosomal protein S6 0.0171778
IGFBP4 insulin-like growth factor binding protein 4 0.0171724
PTCH1 patched 1 0.0170635
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 0.016925
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0168951
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0166732
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 0.0166395
NBAS neuroblastoma amplified sequence 0.0165193
NUCB2 nucleobindin 2 0.0164044

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.251629
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.11265
GMDS GDP-mannose 4,6-dehydratase -0.089005
TPT1 tumor protein, translationally-controlled 1 -0.0856251
TMSB10 thymosin beta 10 -0.0849349
PTMA prothymosin, alpha -0.0813659
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0775098
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0730929
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0713852
ONECUT3 one cut homeobox 3 -0.0707052
ACTN4 actinin, alpha 4 -0.0691688
EXT1 exostosin glycosyltransferase 1 -0.0650023
MYO1E myosin IE -0.0633439
RBM39 RNA binding motif protein 39 -0.0606903
KRT8 keratin 8, type II -0.0600957
VCL vinculin -0.055759
AHNAK AHNAK nucleoprotein -0.0553153
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0552202
ACTG1 actin gamma 1 -0.0549719
KRT18 keratin 18, type I -0.0544178
KLF5 Kruppel-like factor 5 (intestinal) -0.0541062
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0533394
PIGR polymeric immunoglobulin receptor -0.0523124
LMO7 LIM domain 7 -0.0510822
CCND1 cyclin D1 -0.0507938
CD44 CD44 molecule (Indian blood group) -0.0500142
LOC112694756 uncharaterized LOC112694756 -0.0492204
ALCAM activated leukocyte cell adhesion molecule -0.0483452
IARS1 isoleucyl-tRNA synthetase 1 -0.0482064
H1-0 H1.0 linker histone -0.0480789
ANKRD11 ankyrin repeat domain 11 -0.0446387
RPS24 ribosomal protein S24 -0.0444216
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0440776
PDE4D phosphodiesterase 4D, cAMP-specific -0.0425636
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0417943
RPLP1 ribosomal protein, large, P1 -0.0404612
EEF2 eukaryotic translation elongation factor 2 -0.0403266
ARF1 ADP-ribosylation factor 1 -0.0397868
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0392854
GARS1 glycyl-tRNA synthetase 1 -0.0390015
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0389747
TFRC transferrin receptor -0.0385189
RPL34 ribosomal protein L34 -0.0380894
SLC38A2 solute carrier family 38, member 2 -0.0374923
ANKRD17 ankyrin repeat domain 17 -0.0373269
KDM3A lysine (K)-specific demethylase 3A -0.0371334
LMNA lamin A/C -0.0369433
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0368042
GPHN gephyrin -0.03626
EWSR1 EWS RNA-binding protein 1 -0.0359364
RPS8 ribosomal protein S8 -0.0358452
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.035735
HDLBP high density lipoprotein binding protein -0.0356389
ANXA2 annexin A2 -0.0352702
RAB1A RAB1A, member RAS oncogene family -0.0346276
APP amyloid beta (A4) precursor protein -0.0342966
IER3 immediate early response 3 -0.0340087
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0339308
RACK1 receptor for activated C kinase 1 -0.0337379
MYOF myoferlin -0.0332585
NAP1L1 nucleosome assembly protein 1-like 1 -0.0331827
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0329222
CUX1 cut-like homeobox 1 -0.0328481
NOP58 NOP58 ribonucleoprotein -0.0327563
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0326054
EIF1 eukaryotic translation initiation factor 1 -0.0325693
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0325473
PTPRK protein tyrosine phosphatase, receptor type, K -0.032022
RAD21 RAD21 homolog (S. pombe) -0.0319462
CADPS Ca++-dependent secretion activator -0.0318579
ZFAND3 zinc finger, AN1-type domain 3 -0.0315581
HDAC2 histone deacetylase 2 -0.0312061
FOXO1 forkhead box O1 -0.0311216
CTBP2 C-terminal binding protein 2 -0.0308645
CANX calnexin -0.0308314
GDF15 growth differentiation factor 15 -0.030826
RHPN2 rhophilin, Rho GTPase binding protein 2 -0.0305535
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0305135
TXNRD1 thioredoxin reductase 1 -0.0304933
PDLIM5 PDZ and LIM domain 5 -0.0300857
MYH9 myosin, heavy chain 9, non-muscle -0.029958
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0299299
EPCAM epithelial cell adhesion molecule -0.0298508
RPL13A ribosomal protein L13a -0.0296122
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0293975
SMYD3 SET and MYND domain containing 3 -0.029296
NALF1 NALCN channel auxiliary factor 1 -0.0292727
POF1B premature ovarian failure, 1B -0.0291614
SMG7 SMG7 nonsense mediated mRNA decay factor -0.029117
CEMIP cell migration inducing protein, hyaluronan binding -0.029015
MTAP methylthioadenosine phosphorylase -0.0289331
RPL4 ribosomal protein L4 -0.0289305
ANKRD10 ankyrin repeat domain 10 -0.0287736
FUS FUS RNA binding protein -0.0287423
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0286866
RPL26 ribosomal protein L26 -0.0281956
RBM25 RNA binding motif protein 25 -0.0280804
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0280144
LARP1 La ribonucleoprotein domain family, member 1 -0.0277677
ANXA1 annexin A1 -0.0277219