Proglumide_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Proglumide perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Proglumide_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.0775162
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.07716
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0769231
PDE4B phosphodiesterase 4B, cAMP-specific 0.0740702
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0732781
GOLGA4 golgin A4 0.0708433
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0692307
ADAM10 ADAM metallopeptidase domain 10 0.0690199
DLG1 discs, large homolog 1 (Drosophila) 0.061828
EZR ezrin 0.061401
TXNIP thioredoxin interacting protein 0.0593334
ZEB1 zinc finger E-box binding homeobox 1 0.0592901
CENPF centromere protein F, 350/400kDa 0.0565983
LDHA lactate dehydrogenase A 0.0521024
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0501384
EFNA5 ephrin-A5 0.0490005
FLNB filamin B, beta 0.0481251
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.046706
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0465139
MKI67 marker of proliferation Ki-67 0.0457608
CACNB4 calcium channel, voltage-dependent, beta 4 subunit 0.0451207
NFIA nuclear factor I/A 0.0440368
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0434889
EVI5 ecotropic viral integration site 5 0.0430019
CANX calnexin 0.0418186
SMNDC1 survival motor neuron domain containing 1 0.0414587
LPP LIM domain containing preferred translocation partner in lipoma 0.0411485
NIPBL Nipped-B homolog (Drosophila) 0.0404069
NAV2 neuron navigator 2 0.0399529
SBF2 SET binding factor 2 0.0394842
AHNAK AHNAK nucleoprotein 0.0389965
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0382443
HJURP Holliday junction recognition protein 0.0369662
BMP2K BMP2 inducible kinase 0.0369373
PGK1 phosphoglycerate kinase 1 0.0363151
CLIP1 CAP-GLY domain containing linker protein 1 0.0352766
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0352083
SET SET nuclear proto-oncogene 0.0348627
PRELID2 PRELI domain containing 2 0.03463
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0344601
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0343826
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0337313
ZCCHC7 zinc finger, CCHC domain containing 7 0.0335095
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase 0.0334443
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0328385
TMF1 TATA element modulatory factor 1 0.032668
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0324134
USP34 ubiquitin specific peptidase 34 0.0323232
ENO1 enolase 1, (alpha) 0.0323016
ZNF638 zinc finger protein 638 0.0318959
LARS1 leucyl-tRNA synthetase 1 0.0315771
VCL vinculin 0.0315713
MXI1 MAX interactor 1, dimerization protein 0.0305363
TPM4 tropomyosin 4 0.0303181
WSB1 WD repeat and SOCS box containing 1 0.0302373
RNF145 ring finger protein 145 0.0301327
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0301057
JMJD1C jumonji domain containing 1C 0.0294742
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0293568
SNX14 sorting nexin 14 0.0293549
SDK1 sidekick cell adhesion molecule 1 0.0289413
ARHGAP5 Rho GTPase activating protein 5 0.0286965
KIF5B kinesin family member 5B 0.0285579
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0284837
RAB6A RAB6A, member RAS oncogene family 0.028311
ZMYM2 zinc finger, MYM-type 2 0.0281465
ANKRD36 ankyrin repeat domain 36 0.0280094
PTBP2 polypyrimidine tract binding protein 2 0.027759
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0276716
TMEM65 transmembrane protein 65 0.0273909
GOLGB1 golgin B1 0.0267527
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.026625
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0266242
SEC31A SEC31 homolog A (S. cerevisiae) 0.0266067
NGLY1 N-glycanase 1 0.0264561
CRYBG3 beta-gamma crystallin domain containing 3 0.0263758
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0263236
CALU calumenin 0.0260149
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0257752
ANKRD12 ankyrin repeat domain 12 0.0257451
ANXA1 annexin A1 0.0256985
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0255561
HILPDA hypoxia inducible lipid droplet-associated 0.025248
ASPH aspartate beta-hydroxylase 0.0250916
FAT1 FAT atypical cadherin 1 0.0248273
TMEM41B transmembrane protein 41B 0.0248269
SQSTM1 sequestosome 1 0.0248179
PHF3 PHD finger protein 3 0.0246403
RSL1D1 ribosomal L1 domain containing 1 0.0246026
BABAM2 BRISC and BRCA1 A complex member 2 0.0245942
PICALM phosphatidylinositol binding clathrin assembly protein 0.0244163
TMEM14B transmembrane protein 14B 0.0244078
TJP1 tight junction protein 1 0.024221
RHBDD1 rhomboid domain containing 1 0.0241609
YEATS2 YEATS domain containing 2 0.0241411
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0240729
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.023996
NF1 neurofibromin 1 0.0238536
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0237761
IL6ST interleukin 6 signal transducer 0.0232893

decreased expression

Symbol Name Standardized Value
PKM pyruvate kinase, muscle -0.167938
PDE4D phosphodiesterase 4D, cAMP-specific -0.0781824
EEF2 eukaryotic translation elongation factor 2 -0.0678224
RPL35A ribosomal protein L35a -0.0626085
EGFR epidermal growth factor receptor -0.0588689
LOC112694756 uncharaterized LOC112694756 -0.0567999
POTEF POTE ankyrin domain family, member F -0.053708
RPLP1 ribosomal protein, large, P1 -0.0501948
FOXP1 forkhead box P1 -0.046034
RPL11 ribosomal protein L11 -0.0453046
ZFAND3 zinc finger, AN1-type domain 3 -0.0442202
SPRY4 sprouty homolog 4 (Drosophila) -0.0402471
RPS6 ribosomal protein S6 -0.0402015
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 -0.0392499
ACTG1 actin gamma 1 -0.0378548
RPS19 ribosomal protein S19 -0.0368191
SLC38A2 solute carrier family 38, member 2 -0.0364762
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0346455
BMP10 bone morphogenetic protein 10 -0.0341333
RPS24 ribosomal protein S24 -0.0335937
RPS8 ribosomal protein S8 -0.0335291
SSBP2 single-stranded DNA binding protein 2 -0.0334577
RPL23 ribosomal protein L23 -0.0323047
EEF1G eukaryotic translation elongation factor 1 gamma -0.0322975
RPL19 ribosomal protein L19 -0.0319881
HEG1 heart development protein with EGF-like domains 1 -0.0316384
RPL13A ribosomal protein L13a -0.0315962
TMSB10 thymosin beta 10 -0.0306696
RPL34 ribosomal protein L34 -0.0303743
RTN4 reticulon 4 -0.0302198
RPL36 ribosomal protein L36 -0.0295939
EIF1 eukaryotic translation initiation factor 1 -0.0289008
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0285318
HDAC9 histone deacetylase 9 -0.0279626
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0279129
RPL3 ribosomal protein L3 -0.027875
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0277763
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0271764
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0270509
ZNF438 zinc finger protein 438 -0.0270313
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0269937
RPL28 ribosomal protein L28 -0.0269514
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0269192
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0267215
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0265283
RPL37A ribosomal protein L37a -0.0261259
TAPBP TAP binding protein (tapasin) -0.0260747
OSMR oncostatin M receptor -0.0250188
SEPTIN9 septin 9 -0.0249202
PRUNE2 prune homolog 2 (Drosophila) -0.0248994
ENO2 enolase 2 (gamma, neuronal) -0.0248526
TFG TRK-fused gene -0.0247733
CCNL1 cyclin L1 -0.0234834
EML4 echinoderm microtubule associated protein like 4 -0.0230703
PHF14 PHD finger protein 14 -0.0230441
CELF1 CUGBP, Elav-like family member 1 -0.0229355
PRDX2 peroxiredoxin 2 -0.0229036
S100A9 S100 calcium binding protein A9 -0.0227673
FMN1 formin 1 -0.022666
GSE1 Gse1 coiled-coil protein -0.0225961
RPL26 ribosomal protein L26 -0.0221381
HMGA1 high mobility group AT-hook 1 -0.0219019
PDE7B phosphodiesterase 7B -0.0218698
FHAD1 forkhead-associated (FHA) phosphopeptide binding domain 1 -0.0217873
RPS4X ribosomal protein S4, X-linked -0.0216625
TXNRD1 thioredoxin reductase 1 -0.0216281
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0215013
GLI3 GLI family zinc finger 3 -0.0212052
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0211704
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0209774
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0206344
RIGI RNA sensor RIG-I -0.020481
PIWIL1 piwi-like RNA-mediated gene silencing 1 -0.0200834
IFI6 interferon, alpha-inducible protein 6 -0.0200385
MSI2 musashi RNA-binding protein 2 -0.019988
RPS3 ribosomal protein S3 -0.0199766
ANKRD11 ankyrin repeat domain 11 -0.0197074
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0194413
MLIP muscular LMNA-interacting protein -0.0193915
DIAPH1 diaphanous-related formin 1 -0.0192735
ACTN4 actinin, alpha 4 -0.0192513
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0192472
ZBTB20 zinc finger and BTB domain containing 20 -0.019007
PITPNB phosphatidylinositol transfer protein, beta -0.0189832
ZNFX1 zinc finger, NFX1-type containing 1 -0.0189033
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0188003
ATP5F1B ATP synthase F1 subunit beta -0.0184321
NAMPT nicotinamide phosphoribosyltransferase -0.0182864
RUNX1 runt-related transcription factor 1 -0.018285
RPL5 ribosomal protein L5 -0.018224
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 -0.0181807
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa -0.0181776
IFI16 interferon, gamma-inducible protein 16 -0.01812
PARD3B par-3 family cell polarity regulator beta -0.0181135
RPS16 ribosomal protein S16 -0.0178936
RPL12 ribosomal protein L12 -0.0178017
XRN2 5'-3' exoribonuclease 2 -0.0176714
FBLN2 fibulin 2 -0.0176414
RPRD2 regulation of nuclear pre-mRNA domain containing 2 -0.0176018
ECT2 epithelial cell transforming 2 -0.0175656