Proglumide_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Proglumide perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Proglumide_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.146723
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0931263
NAMPT nicotinamide phosphoribosyltransferase 0.0697259
AKAP12 A kinase (PRKA) anchor protein 12 0.0679235
TXNIP thioredoxin interacting protein 0.0677232
TPR translocated promoter region, nuclear basket protein 0.0668702
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0664497
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0659834
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0584527
VMP1 vacuole membrane protein 1 0.0532143
RBM39 RNA binding motif protein 39 0.0496005
EREG epiregulin 0.0490706
PRRC2C proline-rich coiled-coil 2C 0.0482799
VCL vinculin 0.0467682
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0465356
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0440898
GOLGA4 golgin A4 0.0440641
PDLIM5 PDZ and LIM domain 5 0.0422914
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0414689
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0405662
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0389282
TOP1 topoisomerase (DNA) I 0.0386697
SETD5 SET domain containing 5 0.0378656
SQSTM1 sequestosome 1 0.037795
RBM25 RNA binding motif protein 25 0.0360834
OGA O-GlcNAcase 0.0350064
ELL2 elongation factor, RNA polymerase II, 2 0.0348259
DUSP5 dual specificity phosphatase 5 0.0347797
RRBP1 ribosome binding protein 1 0.0341183
MYH9 myosin, heavy chain 9, non-muscle 0.03236
ATXN2 ataxin 2 0.031474
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0310952
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0309276
TMF1 TATA element modulatory factor 1 0.0307505
VEGFA vascular endothelial growth factor A 0.0304098
BASP1 brain abundant, membrane attached signal protein 1 0.03038
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.030277
WDR26 WD repeat domain 26 0.029847
TMEM156 transmembrane protein 156 0.0293796
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0281294
MBD5 methyl-CpG binding domain protein 5 0.0281264
JMJD1C jumonji domain containing 1C 0.0280425
TMEM263 transmembrane protein 263 0.0279502
WWTR1 WW domain containing transcription regulator 1 0.0273805
SRRM1 serine/arginine repetitive matrix 1 0.0273668
NTN4 netrin 4 0.0272476
AREG amphiregulin 0.0271134
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0270147
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0269585
ANKRD17 ankyrin repeat domain 17 0.0268015
FBXO32 F-box protein 32 0.026533
PALLD palladin, cytoskeletal associated protein 0.0260202
RAB1A RAB1A, member RAS oncogene family 0.0257964
CTNND1 catenin (cadherin-associated protein), delta 1 0.0255512
CREBRF CREB3 regulatory factor 0.0251942
DGKD diacylglycerol kinase, delta 130kDa 0.0250022
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0248876
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0248083
SEC24A SEC24 family member A 0.0246603
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0246411
NAP1L1 nucleosome assembly protein 1-like 1 0.0246299
GOLM2 golgi membrane protein 2 0.0245682
ACBD3 acyl-CoA binding domain containing 3 0.0243476
ZFC3H1 zinc finger, C3H1-type containing 0.0243185
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0241948
UIMC1 ubiquitin interaction motif containing 1 0.0240001
BZW1 basic leucine zipper and W2 domains 1 0.0239897
SRP54 signal recognition particle 54kDa 0.0238932
ATP13A3 ATPase type 13A3 0.0238468
DDIT4 DNA-damage-inducible transcript 4 0.0238363
CSNK1A1 casein kinase 1, alpha 1 0.0237511
KSR1 kinase suppressor of ras 1 0.0237046
VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) 0.0233455
RPS12 ribosomal protein S12 0.0233114
TMEM41B transmembrane protein 41B 0.0230682
HPCAL1 hippocalcin-like 1 0.0230003
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0228986
SMAD3 SMAD family member 3 0.0227808
WAC WW domain containing adaptor with coiled-coil 0.0226189
SBF2 SET binding factor 2 0.0226066
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0225721
CDC27 cell division cycle 27 0.0225413
IL6ST interleukin 6 signal transducer 0.0224394
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0223571
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0222952
SUCO SUN domain containing ossification factor 0.0221201
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0219046
ANXA5 annexin A5 0.0218659
CEP350 centrosomal protein 350kDa 0.0218485
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0217489
NRIP1 nuclear receptor interacting protein 1 0.0216393
MAP3K9 mitogen-activated protein kinase kinase kinase 9 0.0214221
THOC2 THO complex 2 0.0210591
KIF5B kinesin family member 5B 0.0209385
SMOX spermine oxidase 0.0208564
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0206372
ZMYND8 zinc finger, MYND-type containing 8 0.0204209
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0202982
KMT2C lysine (K)-specific methyltransferase 2C 0.0201903
CUL3 cullin 3 0.0199979

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.224271
FTH1 ferritin, heavy polypeptide 1 -0.202519
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.172665
NRG1 neuregulin 1 -0.158333
NDRG1 N-myc downstream regulated 1 -0.129798
CXCL8 chemokine (C-X-C motif) ligand 8 -0.127015
TMSB10 thymosin beta 10 -0.113986
FN1 fibronectin 1 -0.111627
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0909193
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0828929
PTMA prothymosin, alpha -0.0818122
CADM1 cell adhesion molecule 1 -0.0655791
MRPS6 mitochondrial ribosomal protein S6 -0.0645082
VIM vimentin -0.0623096
SOD2 superoxide dismutase 2, mitochondrial -0.0613326
HLA-B major histocompatibility complex, class I, B -0.0578998
RPL35A ribosomal protein L35a -0.0556373
PKM pyruvate kinase, muscle -0.0555932
LOC112694756 uncharaterized LOC112694756 -0.0547767
IFI27 interferon, alpha-inducible protein 27 -0.0538713
FNDC3B fibronectin type III domain containing 3B -0.0524459
HMGA2 high mobility group AT-hook 2 -0.0509981
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0509958
STC2 stanniocalcin 2 -0.0503202
HMGA1 high mobility group AT-hook 1 -0.0501354
MAP1B microtubule-associated protein 1B -0.0494096
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0468958
FTL ferritin, light polypeptide -0.0454228
ENO2 enolase 2 (gamma, neuronal) -0.0450404
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.044714
LOX lysyl oxidase -0.0415325
SFTPA2 surfactant protein A2 -0.0400753
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0400662
PDIA4 protein disulfide isomerase family A, member 4 -0.0399785
LMNA lamin A/C -0.0398601
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0397829
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0386553
EPS8 epidermal growth factor receptor pathway substrate 8 -0.038543
UBC ubiquitin C -0.0384894
POTEF POTE ankyrin domain family, member F -0.0383495
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0380683
GRB10 growth factor receptor-bound protein 10 -0.0380397
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0375795
CALU calumenin -0.037464
CANX calnexin -0.0368687
GLIS3 GLIS family zinc finger 3 -0.0357275
COPA coatomer protein complex, subunit alpha -0.0343119
AEBP2 AE binding protein 2 -0.0342525
PGK1 phosphoglycerate kinase 1 -0.0329995
TRIO trio Rho guanine nucleotide exchange factor -0.0328833
S100A6 S100 calcium binding protein A6 -0.0322353
TMSB4X thymosin beta 4, X-linked -0.0310742
S100A10 S100 calcium binding protein A10 -0.0309033
DNM1L dynamin 1-like -0.030351
PFN1 profilin 1 -0.0302874
INTS6 integrator complex subunit 6 -0.0301476
CENPF centromere protein F, 350/400kDa -0.0294977
PTK2 protein tyrosine kinase 2 -0.0294971
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0290696
SDCBP syndecan binding protein (syntenin) -0.0285204
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0284892
BSG basigin (Ok blood group) -0.0279294
TAGLN2 transgelin 2 -0.0278165
LDHA lactate dehydrogenase A -0.0268855
LCORL ligand dependent nuclear receptor corepressor-like -0.0268664
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A -0.0268159
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0267972
HILPDA hypoxia inducible lipid droplet-associated -0.0266234
AHNAK AHNAK nucleoprotein -0.0266081
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0263964
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0261211
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0260317
FLNA filamin A, alpha -0.0258708
LIMCH1 LIM and calponin homology domains 1 -0.0258244
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0257056
CTSD cathepsin D -0.025629
RPS5 ribosomal protein S5 -0.0252218
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0249858
RPL37 ribosomal protein L37 -0.0249514
WARS1 tryptophanyl-tRNA synthetase 1 -0.0249344
MAML2 mastermind-like 2 (Drosophila) -0.0246789
ACTG1 actin gamma 1 -0.0245422
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.0245232
HLA-A major histocompatibility complex, class I, A -0.0241142
ERLEC1 endoplasmic reticulum lectin 1 -0.0240019
RPS20 ribosomal protein S20 -0.0237768
RNF213 ring finger protein 213 -0.0234642
ANKRD28 ankyrin repeat domain 28 -0.0230744
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0230129
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.022938
SAR1A secretion associated, Ras related GTPase 1A -0.0229219
MIDEAS mitotic deacetylase associated SANT domain protein -0.0228918
RASAL2 RAS protein activator like 2 -0.0227618
CRELD2 cysteine-rich with EGF-like domains 2 -0.0227424
RPL26 ribosomal protein L26 -0.0226996
CALR calreticulin -0.0223074
SPDYA speedy/RINGO cell cycle regulator family member A -0.0219071
RPL31 ribosomal protein L31 -0.0218755
BICD1 bicaudal D homolog 1 (Drosophila) -0.021606
NPR2 natriuretic peptide receptor 2 -0.0215808