Pyridoxine (hydrochloride)_AsPC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pyridoxine (hydrochloride) perturbation in AsPC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pyridoxine (hydrochloride)_AsPC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.235952
FLNB filamin B, beta 0.088932
LAMA4 laminin, alpha 4 0.0722277
EMP1 epithelial membrane protein 1 0.0619082
SGMS2 sphingomyelin synthase 2 0.0539679
DOCK5 dedicator of cytokinesis 5 0.0520415
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0486196
SRRM2 serine/arginine repetitive matrix 2 0.0469866
TGM2 transglutaminase 2 0.0460503
ITGA6 integrin, alpha 6 0.0453936
EGFR epidermal growth factor receptor 0.0440855
APLP2 amyloid beta (A4) precursor-like protein 2 0.0429291
PSD3 pleckstrin and Sec7 domain containing 3 0.0420202
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0414472
UBC ubiquitin C 0.0410753
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.038906
ARHGAP42 Rho GTPase activating protein 42 0.03794
PDE4D phosphodiesterase 4D, cAMP-specific 0.0367265
FLNA filamin A, alpha 0.0363599
MPRIP myosin phosphatase Rho interacting protein 0.0357924
PLEC plectin 0.0353039
SPTBN1 spectrin, beta, non-erythrocytic 1 0.032878
COL17A1 collagen, type XVII, alpha 1 0.0325915
CD44 CD44 molecule (Indian blood group) 0.032458
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0312061
DSPP dentin sialophosphoprotein 0.0310792
MYH9 myosin, heavy chain 9, non-muscle 0.0306853
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.030198
MSN moesin 0.0300932
CYSTM1 cysteine-rich transmembrane module containing 1 0.0289266
GDA guanine deaminase 0.0286402
VCAN versican 0.0285218
ZBTB20 zinc finger and BTB domain containing 20 0.0276866
FAT1 FAT atypical cadherin 1 0.0271839
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 0.0245718
EEF2 eukaryotic translation elongation factor 2 0.0243876
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.023908
MBNL1 muscleblind-like splicing regulator 1 0.0238411
HDAC9 histone deacetylase 9 0.0236782
AREG amphiregulin 0.0236457
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.023508
HMGA2 high mobility group AT-hook 2 0.0232803
TBC1D5 TBC1 domain family, member 5 0.022929
MMP1 matrix metallopeptidase 1 0.0229086
THSD4 thrombospondin, type I, domain containing 4 0.0229067
LMNA lamin A/C 0.0226166
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0221582
FMNL2 formin-like 2 0.0220126
PCDH1 protocadherin 1 0.0213461
SEPTIN9 septin 9 0.0211589
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 0.021104
BMP6 bone morphogenetic protein 6 0.0207089
MX1 MX dynamin-like GTPase 1 0.020676
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0204159
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0201592
AHR aryl hydrocarbon receptor 0.0201585
FBXL17 F-box and leucine-rich repeat protein 17 0.0201347
ANXA1 annexin A1 0.0201133
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0200911
MYOF myoferlin 0.0199567
TXNRD1 thioredoxin reductase 1 0.0199396
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0194416
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.0191817
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0191571
FHL2 four and a half LIM domains 2 0.0190744
CCNL1 cyclin L1 0.0188179
RBMS1 RNA binding motif, single stranded interacting protein 1 0.0187364
TMEM117 transmembrane protein 117 0.0185926
SERTAD2 SERTA domain containing 2 0.0185776
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0181483
KIAA0040 KIAA0040 0.0181145
WDR43 WD repeat domain 43 0.0180993
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0179982
RABGAP1L RAB GTPase activating protein 1-like 0.017929
MCL1 myeloid cell leukemia 1 0.0177459
EFNB2 ephrin-B2 0.017709
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0172523
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0170576
ADGRE5 adhesion G protein-coupled receptor E5 0.0169845
ADAR adenosine deaminase, RNA-specific 0.0169756
LMCD1 LIM and cysteine-rich domains 1 0.0169169
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0168333
ARHGAP26 Rho GTPase activating protein 26 0.0168297
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.0167533
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0166588
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0165899
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0165706
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0165441
STK17B serine/threonine kinase 17b 0.0163993
DPY19L1 dpy-19-like 1 (C. elegans) 0.0163004
LPP LIM domain containing preferred translocation partner in lipoma 0.0162212
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.0161341
STC1 stanniocalcin 1 0.0161134
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0160769
DPYSL2 dihydropyrimidinase-like 2 0.0158653
PCM1 pericentriolar material 1 0.0158349
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0157668
CIB1 calcium and integrin binding 1 (calmyrin) 0.0156704
MLF1 myeloid leukemia factor 1 0.0156201
MYO1E myosin IE 0.0155967

decreased expression

Symbol Name Standardized Value
LAMB3 laminin, beta 3 -0.229758
TMSB10 thymosin beta 10 -0.177516
ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa -0.152858
BAIAP2L1 BAI1-associated protein 2-like 1 -0.146113
DHRS9 dehydrogenase/reductase (SDR family) member 9 -0.137872
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.117995
TPT1 tumor protein, translationally-controlled 1 -0.106158
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.105072
F3 coagulation factor III (thromboplastin, tissue factor) -0.0935695
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0930606
TPM4 tropomyosin 4 -0.0785563
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0742271
VIM vimentin -0.0706636
LMO7 LIM domain 7 -0.0693006
FTH1 ferritin, heavy polypeptide 1 -0.0685674
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0681501
FGD6 FYVE, RhoGEF and PH domain containing 6 -0.0610383
CD2AP CD2-associated protein -0.0575395
FTL ferritin, light polypeptide -0.0571296
BZW1 basic leucine zipper and W2 domains 1 -0.0566573
SDC4 syndecan 4 -0.0549741
LMTK2 lemur tyrosine kinase 2 -0.0546286
MORF4L2 mortality factor 4 like 2 -0.0543157
AKAP12 A kinase (PRKA) anchor protein 12 -0.0539615
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0539281
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0533566
PGK1 phosphoglycerate kinase 1 -0.052447
PTMA prothymosin, alpha -0.0521575
RRBP1 ribosome binding protein 1 -0.0515687
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.051549
GNAS GNAS complex locus -0.0514924
B2M beta-2-microglobulin -0.0506191
PDLIM5 PDZ and LIM domain 5 -0.0505457
TAOK3 TAO kinase 3 -0.0485951
RIOK3 RIO kinase 3 -0.046163
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 -0.0458886
KDM5B lysine (K)-specific demethylase 5B -0.0451323
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0450108
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0449117
MXD1 MAX dimerization protein 1 -0.0445706
AKAP9 A kinase (PRKA) anchor protein 9 -0.0442816
RAB1A RAB1A, member RAS oncogene family -0.0442485
BIRC6 baculoviral IAP repeat containing 6 -0.043076
WSB1 WD repeat and SOCS box containing 1 -0.0430011
ZMYND8 zinc finger, MYND-type containing 8 -0.0423353
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0406634
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.040504
USP34 ubiquitin specific peptidase 34 -0.0402658
CD164 CD164 molecule, sialomucin -0.0395793
LOC112694756 uncharaterized LOC112694756 -0.0395781
TMBIM1 transmembrane BAX inhibitor motif containing 1 -0.0393302
RPS8 ribosomal protein S8 -0.0387771
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0383671
CD59 CD59 molecule, complement regulatory protein -0.0382699
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0381513
NDFIP1 Nedd4 family interacting protein 1 -0.037786
STAU1 staufen double-stranded RNA binding protein 1 -0.0374915
OGA O-GlcNAcase -0.0373739
ARHGAP5 Rho GTPase activating protein 5 -0.0370642
SPAG9 sperm associated antigen 9 -0.0365227
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 -0.0363326
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0361504
PRSS3 protease, serine, 3 -0.0357646
SEC31A SEC31 homolog A (S. cerevisiae) -0.035653
SEPTIN10 septin 10 -0.0349899
VEZT vezatin, adherens junctions transmembrane protein -0.0348747
AGO2 argonaute RISC catalytic component 2 -0.0341198
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0339756
SQSTM1 sequestosome 1 -0.0339566
SLMAP sarcolemma associated protein -0.0338047
EIF1 eukaryotic translation initiation factor 1 -0.0335365
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0333956
MON2 MON2 homolog (S. cerevisiae) -0.0332071
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0330183
PTK2 protein tyrosine kinase 2 -0.033015
RPL26 ribosomal protein L26 -0.0329662
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.032889
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0327158
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0327006
TSC22D2 TSC22 domain family, member 2 -0.0323952
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0320638
CLMP CXADR-like membrane protein -0.031954
SLC35F3 solute carrier family 35, member F3 -0.0317531
CEP350 centrosomal protein 350kDa -0.0317303
UPP1 uridine phosphorylase 1 -0.0317169
UBE2B ubiquitin-conjugating enzyme E2B -0.0313371
PARD3 par-3 family cell polarity regulator -0.0313212
GRB10 growth factor receptor-bound protein 10 -0.031234
FBXO11 F-box protein 11 -0.0311694
RESF1 retroelement silencing factor 1 -0.0308479
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0304177
GCC2 GRIP and coiled-coil domain containing 2 -0.0302421
RPL37 ribosomal protein L37 -0.0300446
MTDH metadherin -0.0298318
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.029775
UBE2H ubiquitin-conjugating enzyme E2H -0.0297713
HLA-E major histocompatibility complex, class I, E -0.0296895
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0296697
RPS3 ribosomal protein S3 -0.0294099
ANXA2 annexin A2 -0.0293055