Pyridoxine (hydrochloride)_BT-474 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pyridoxine (hydrochloride) perturbation in BT-474 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pyridoxine (hydrochloride)_BT-474 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
STAT1 signal transducer and activator of transcription 1, 91kDa 0.100206
SRRM2 serine/arginine repetitive matrix 2 0.0877601
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0857391
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0798642
SET SET nuclear proto-oncogene 0.0794355
NCOA3 nuclear receptor coactivator 3 0.0785971
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0779894
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0778495
HSPA8 heat shock 70kDa protein 8 0.0706551
SP100 SP100 nuclear antigen 0.0635594
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0625801
SLFN5 schlafen family member 5 0.0613336
EEF2 eukaryotic translation elongation factor 2 0.0608697
MCL1 myeloid cell leukemia 1 0.0568253
VCP valosin containing protein 0.0541026
APP amyloid beta (A4) precursor protein 0.0531518
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0504606
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0503084
ENO1 enolase 1, (alpha) 0.0498363
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0479672
TXNRD1 thioredoxin reductase 1 0.047915
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.047544
ANKRD36C ankyrin repeat domain 36C 0.0472443
TOM1L1 target of myb1 (chicken)-like 1 0.0470597
DSPP dentin sialophosphoprotein 0.0468031
PLSCR1 phospholipid scramblase 1 0.0467491
DOCK5 dedicator of cytokinesis 5 0.0458029
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0455628
ZNFX1 zinc finger, NFX1-type containing 1 0.0453901
MYH9 myosin, heavy chain 9, non-muscle 0.045284
RPS12 ribosomal protein S12 0.0449861
IFI6 interferon, alpha-inducible protein 6 0.0439994
CDK12 cyclin-dependent kinase 12 0.0438538
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0434222
KMT2C lysine (K)-specific methyltransferase 2C 0.0429216
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0425866
SMYD3 SET and MYND domain containing 3 0.0422827
KIF5B kinesin family member 5B 0.0413852
PMP22 peripheral myelin protein 22 0.0411902
SBF2 SET binding factor 2 0.0411229
CEMIP cell migration inducing protein, hyaluronan binding 0.0407288
ADAR adenosine deaminase, RNA-specific 0.0401686
ARHGAP5 Rho GTPase activating protein 5 0.0398217
VAV3 vav 3 guanine nucleotide exchange factor 0.0391244
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0385554
EPAS1 endothelial PAS domain protein 1 0.0378516
AHR aryl hydrocarbon receptor 0.0376724
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0373388
KDM2A lysine (K)-specific demethylase 2A 0.0371433
RABGAP1L RAB GTPase activating protein 1-like 0.0370215
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0366649
RPS6 ribosomal protein S6 0.0363036
SPTBN1 spectrin, beta, non-erythrocytic 1 0.03586
TC2N tandem C2 domains, nuclear 0.0358159
TRIP12 thyroid hormone receptor interactor 12 0.0357725
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.0354471
CTTN cortactin 0.0352016
KIAA1217 KIAA1217 0.0351756
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0351589
FNDC3A fibronectin type III domain containing 3A 0.0350375
RPS3 ribosomal protein S3 0.0348088
MX1 MX dynamin-like GTPase 1 0.0346666
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.034428
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.034349
XRN1 5'-3' exoribonuclease 1 0.0340412
EIF5 eukaryotic translation initiation factor 5 0.0336418
KTN1 kinectin 1 (kinesin receptor) 0.0330038
SAMD12 sterile alpha motif domain containing 12 0.0328682
CSNK1A1 casein kinase 1, alpha 1 0.0324855
NRP1 neuropilin 1 0.032341
TPM3 tropomyosin 3 0.0318985
PLK2 polo-like kinase 2 0.031869
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0317861
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0317399
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0316432
STIP1 stress-induced phosphoprotein 1 0.0315863
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40 0.0311443
HIPK2 homeodomain interacting protein kinase 2 0.0310991
GPHN gephyrin 0.0310712
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0307981
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0307031
RPS2 ribosomal protein S2 0.0305035
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0296783
PNN pinin, desmosome associated protein 0.0296266
CALR calreticulin 0.0295334
CANX calnexin 0.0293694
USO1 USO1 vesicle transport factor 0.0289903
LARP1 La ribonucleoprotein domain family, member 1 0.0287213
VEGFA vascular endothelial growth factor A 0.0285591
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0282433
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0281811
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0278218
USP47 ubiquitin specific peptidase 47 0.0276144
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.027594
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0275314
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.027122
LIMCH1 LIM and calponin homology domains 1 0.0269969
ABHD17C abhydrolase domain containing 17C 0.0268571
NRIP1 nuclear receptor interacting protein 1 0.0268549
MT2A metallothionein 2A 0.0266944

decreased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 -0.156733
LASP1 LIM and SH3 protein 1 -0.13511
RPL23 ribosomal protein L23 -0.12939
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.129368
IGFBP5 insulin-like growth factor binding protein 5 -0.121316
TMSB10 thymosin beta 10 -0.0774373
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0703242
RPL35A ribosomal protein L35a -0.069174
GRB7 growth factor receptor-bound protein 7 -0.0643065
POTEF POTE ankyrin domain family, member F -0.061568
PBX1 pre-B-cell leukemia homeobox 1 -0.0608932
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0563446
FTH1 ferritin, heavy polypeptide 1 -0.0516146
TMEM123 transmembrane protein 123 -0.0515599
ERBB2 erb-b2 receptor tyrosine kinase 2 -0.0513949
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 -0.0491651
MUC6 mucin 6, oligomeric mucus/gel-forming -0.0426353
FASN fatty acid synthase -0.0421892
TMSB4X thymosin beta 4, X-linked -0.0419617
TENM2 teneurin transmembrane protein 2 -0.041525
RPL34 ribosomal protein L34 -0.0411586
PDLIM5 PDZ and LIM domain 5 -0.0399301
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 -0.0383379
MYL12B myosin, light chain 12B, regulatory -0.0381606
GNAS GNAS complex locus -0.0371115
MIDN midnolin -0.0365264
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0364849
P4HB prolyl 4-hydroxylase, beta polypeptide -0.035075
ACSS2 acyl-CoA synthetase short-chain family member 2 -0.0348637
RAB2A RAB2A, member RAS oncogene family -0.0346679
LMAN1 lectin, mannose-binding, 1 -0.0344209
KRT8 keratin 8, type II -0.0341339
CATSPERB catsper channel auxiliary subunit beta -0.033829
DNAH14 dynein, axonemal, heavy chain 14 -0.0335516
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0333072
ELOVL5 ELOVL fatty acid elongase 5 -0.0331073
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0330921
FADS2 fatty acid desaturase 2 -0.0330089
RPS19 ribosomal protein S19 -0.0327675
S100A6 S100 calcium binding protein A6 -0.0325759
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0324797
CCND1 cyclin D1 -0.0324245
GRB10 growth factor receptor-bound protein 10 -0.0321793
RPL19 ribosomal protein L19 -0.031776
ACTG1 actin gamma 1 -0.0313657
MDK midkine (neurite growth-promoting factor 2) -0.0312872
VCL vinculin -0.0311079
NDRG1 N-myc downstream regulated 1 -0.0307536
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0299421
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0296183
SOX4 SRY (sex determining region Y)-box 4 -0.029526
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.0288504
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0281965
S100A14 S100 calcium binding protein A14 -0.0280487
ALCAM activated leukocyte cell adhesion molecule -0.0277689
GATA3 GATA binding protein 3 -0.0274836
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0274146
MSMO1 methylsterol monooxygenase 1 -0.0271767
RPS24 ribosomal protein S24 -0.0271573
RPL12 ribosomal protein L12 -0.0271078
BCAS1 breast carcinoma amplified sequence 1 -0.0270931
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0269375
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0263078
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0262086
CD164 CD164 molecule, sialomucin -0.0255473
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0253685
HMGB1 high mobility group box 1 -0.0252796
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0245365
SLC38A1 solute carrier family 38, member 1 -0.0244493
CWC25 CWC25 spliceosome-associated protein homolog (S. cerevisiae) -0.0238207
IDI1 isopentenyl-diphosphate delta isomerase 1 -0.0238204
PERP PERP, TP53 apoptosis effector -0.0236924
TUBB tubulin, beta class I -0.0236288
KAZN kazrin, periplakin interacting protein -0.0235851
CD24 CD24 molecule -0.0235273
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0231871
TP53INP2 tumor protein p53 inducible nuclear protein 2 -0.0231677
TOB1 transducer of ERBB2, 1 -0.022769
KIF16B kinesin family member 16B -0.0226413
TMEM41B transmembrane protein 41B -0.0225314
YPEL2 yippee-like 2 (Drosophila) -0.0222802
DEK DEK proto-oncogene -0.0221548
RRBP1 ribosome binding protein 1 -0.0220321
EGR1 early growth response 1 -0.0219359
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0218075
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 -0.0215005
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0214948
MARK2 MAP/microtubule affinity-regulating kinase 2 -0.0214863
MGP matrix Gla protein -0.021424
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0214113
MSI2 musashi RNA-binding protein 2 -0.0209441
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0207066
CCNI cyclin I -0.0206144
RAB7A RAB7A, member RAS oncogene family -0.0204073
HMGA1 high mobility group AT-hook 1 -0.0200277
TTC6 tetratricopeptide repeat domain 6 -0.0198626
PRRC2B proline-rich coiled-coil 2B -0.0197858
MARCHF6 membrane associated ring-CH-type finger 6 -0.0196991
ACTN4 actinin, alpha 4 -0.0192972
GSE1 Gse1 coiled-coil protein -0.0192565