Pyridoxine (hydrochloride)_HEC-1-A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pyridoxine (hydrochloride) perturbation in HEC-1-A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pyridoxine (hydrochloride)_HEC-1-A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FLNA filamin A, alpha 0.106072
MYH9 myosin, heavy chain 9, non-muscle 0.102262
MKI67 marker of proliferation Ki-67 0.0748412
SRRM2 serine/arginine repetitive matrix 2 0.0731171
SVIL supervillin 0.0645634
LAMC2 laminin, gamma 2 0.0542017
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0527806
CD44 CD44 molecule (Indian blood group) 0.0494095
EEF2 eukaryotic translation elongation factor 2 0.0465049
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0445571
PAX8 paired box 8 0.0429706
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0391586
MACF1 microtubule-actin crosslinking factor 1 0.0388851
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0386998
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0377121
NRIP1 nuclear receptor interacting protein 1 0.0363933
HSPA8 heat shock 70kDa protein 8 0.03502
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0346296
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0326751
MMS22L MMS22-like, DNA repair protein 0.0316905
TXNRD1 thioredoxin reductase 1 0.0312767
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0312207
EXT1 exostosin glycosyltransferase 1 0.0310373
H1-4 H1.4 linker histone, cluster member 0.0309689
ITGA6 integrin, alpha 6 0.0302942
INTS6 integrator complex subunit 6 0.0301644
VMP1 vacuole membrane protein 1 0.0298487
OSBPL10 oxysterol binding protein-like 10 0.0282632
TPM4 tropomyosin 4 0.0281673
DSPP dentin sialophosphoprotein 0.0281569
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0281168
RPS27A ribosomal protein S27a 0.0279626
FAT1 FAT atypical cadherin 1 0.0278003
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0273845
IRF1 interferon regulatory factor 1 0.0271774
PDE4D phosphodiesterase 4D, cAMP-specific 0.0271278
WWC1 WW and C2 domain containing 1 0.026716
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0266568
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0266545
ANKRD36 ankyrin repeat domain 36 0.0263649
EIF1 eukaryotic translation initiation factor 1 0.0258713
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0257927
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0257451
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0256983
RPL38 ribosomal protein L38 0.0256488
SMC1A structural maintenance of chromosomes 1A 0.0253349
ATAD2 ATPase family, AAA domain containing 2 0.0253132
SPIDR scaffolding protein involved in DNA repair 0.0249512
ZSWIM6 zinc finger, SWIM-type containing 6 0.0249181
VCL vinculin 0.0249121
PARD3B par-3 family cell polarity regulator beta 0.0246928
CSNK1A1 casein kinase 1, alpha 1 0.0246794
ATXN1 ataxin 1 0.0244494
NCEH1 neutral cholesterol ester hydrolase 1 0.024377
FBXL17 F-box and leucine-rich repeat protein 17 0.0238864
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0237154
RPS25 ribosomal protein S25 0.0236854
MPRIP myosin phosphatase Rho interacting protein 0.0234852
AKAP12 A kinase (PRKA) anchor protein 12 0.0228461
RAD51B RAD51 paralog B 0.0226401
NCAPG2 non-SMC condensin II complex, subunit G2 0.0225026
BRD2 bromodomain containing 2 0.0224625
DOCK5 dedicator of cytokinesis 5 0.0224157
SKIL SKI-like proto-oncogene 0.0223858
SLC38A2 solute carrier family 38, member 2 0.0221917
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0219027
RPS29 ribosomal protein S29 0.0217113
LAMA4 laminin, alpha 4 0.0214511
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0214484
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0213744
SSH2 slingshot protein phosphatase 2 0.0213578
ENO1 enolase 1, (alpha) 0.0213192
RPL37A ribosomal protein L37a 0.0211736
SET SET nuclear proto-oncogene 0.0210431
ITGB6 integrin, beta 6 0.0207741
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0206808
DMXL1 Dmx-like 1 0.0205269
EIF5 eukaryotic translation initiation factor 5 0.0203802
MACROD2 MACRO domain containing 2 0.0203412
CAB39 calcium binding protein 39 0.0202139
TRAPPC9 trafficking protein particle complex 9 0.0201487
VIM vimentin 0.0201055
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0200441
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0200273
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.01994
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0196208
ITGAV integrin, alpha V 0.0196127
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 0.0195975
KTN1 kinectin 1 (kinesin receptor) 0.0195899
PLEC plectin 0.019511
RANBP17 RAN binding protein 17 0.0194737
HMGA2 high mobility group AT-hook 2 0.0194467
CAPRIN1 cell cycle associated protein 1 0.0194245
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.0193974
DNAH14 dynein, axonemal, heavy chain 14 0.0193374
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0193287
JUN jun proto-oncogene 0.0190893
KRT86 keratin 86, type II 0.0190778
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0188632
AATF apoptosis antagonizing transcription factor 0.0186387

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.225951
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.191172
FNDC3B fibronectin type III domain containing 3B -0.131583
NDRG1 N-myc downstream regulated 1 -0.104087
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0962775
LDHA lactate dehydrogenase A -0.094112
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0825589
GOLGA4 golgin A4 -0.0767162
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0703398
TMSB10 thymosin beta 10 -0.0654758
HELZ helicase with zinc finger -0.0653227
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0613619
HMGA1 high mobility group AT-hook 1 -0.0600398
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0589159
ZNF292 zinc finger protein 292 -0.0587601
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0574451
ANXA2 annexin A2 -0.0558363
CANX calnexin -0.0542397
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0531459
KRT7 keratin 7, type II -0.0520091
RNF145 ring finger protein 145 -0.0513461
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0512646
LMAN1 lectin, mannose-binding, 1 -0.0492806
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0490709
ERRFI1 ERBB receptor feedback inhibitor 1 -0.048498
POTEF POTE ankyrin domain family, member F -0.0474577
LPP LIM domain containing preferred translocation partner in lipoma -0.0470823
B2M beta-2-microglobulin -0.0451168
GNAS GNAS complex locus -0.0437335
UGCG UDP-glucose ceramide glucosyltransferase -0.0437062
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0435014
IARS1 isoleucyl-tRNA synthetase 1 -0.043214
SEPTIN7 septin 7 -0.0431091
TRIO trio Rho guanine nucleotide exchange factor -0.0430683
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0424848
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0422812
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0422789
SBF2 SET binding factor 2 -0.041441
LOC112694756 uncharaterized LOC112694756 -0.0412157
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0406549
LIMCH1 LIM and calponin homology domains 1 -0.0403436
FBXL2 F-box and leucine-rich repeat protein 2 -0.0401425
ANKRD10 ankyrin repeat domain 10 -0.0396972
NPEPPS aminopeptidase puromycin sensitive -0.0396068
RPLP0 ribosomal protein, large, P0 -0.0395335
SEC24D SEC24 family member D -0.0395328
FNBP1L formin binding protein 1-like -0.0393253
GARS1 glycyl-tRNA synthetase 1 -0.0392942
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0391835
TTC3 tetratricopeptide repeat domain 3 -0.0390585
NF1 neurofibromin 1 -0.0387454
FTH1 ferritin, heavy polypeptide 1 -0.0386353
BBX bobby sox homolog (Drosophila) -0.0381656
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0377234
RPS4X ribosomal protein S4, X-linked -0.0376759
YBX1 Y box binding protein 1 -0.0372785
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.037245
FRAS1 Fraser extracellular matrix complex subunit 1 -0.0371183
INSIG2 insulin induced gene 2 -0.0365289
PGK1 phosphoglycerate kinase 1 -0.0364868
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0362847
FTL ferritin, light polypeptide -0.0359503
BIRC6 baculoviral IAP repeat containing 6 -0.0357176
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0355233
TKT transketolase -0.0352403
TPD52 tumor protein D52 -0.0351229
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0350022
PDIA4 protein disulfide isomerase family A, member 4 -0.034251
FNIP1 folliculin interacting protein 1 -0.0342375
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0342179
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0338013
AHNAK AHNAK nucleoprotein -0.0337835
PDIA3 protein disulfide isomerase family A, member 3 -0.033733
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0337235
FAM162A family with sequence similarity 162, member A -0.0335543
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.0330067
RPL23 ribosomal protein L23 -0.0327806
IRS2 insulin receptor substrate 2 -0.0325648
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0318263
CAPNS1 calpain, small subunit 1 -0.0318111
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.031803
CLINT1 clathrin interactor 1 -0.031577
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0314827
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0314047
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0311648
TUBB tubulin, beta class I -0.0311408
PDIA5 protein disulfide isomerase family A, member 5 -0.0309489
HDLBP high density lipoprotein binding protein -0.0308755
ACTN4 actinin, alpha 4 -0.0307324
MATR3 matrin 3 -0.0305699
DDIT4 DNA-damage-inducible transcript 4 -0.0305136
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0303026
CREB5 cAMP responsive element binding protein 5 -0.0300869
PRRC2B proline-rich coiled-coil 2B -0.030077
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0296202
KLF6 Kruppel-like factor 6 -0.0294462
RPL32 ribosomal protein L32 -0.0293682
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0293527
COPB1 coatomer protein complex, subunit beta 1 -0.0293505
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 -0.0293357