Pyridoxine (hydrochloride)_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Pyridoxine (hydrochloride) perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Pyridoxine (hydrochloride)_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0745642
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0519501
SMAD3 SMAD family member 3 0.0354544
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.034414
SYT1 synaptotagmin I 0.0327233
RAB27B RAB27B, member RAS oncogene family 0.0322971
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0320851
NRP1 neuropilin 1 0.029658
LRMDA leucine rich melanocyte differentiation associated 0.0267759
GLCCI1 glucocorticoid induced 1 0.0255183
ELL2 elongation factor, RNA polymerase II, 2 0.025494
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0252927
ZEB2 zinc finger E-box binding homeobox 2 0.0247885
DST dystonin 0.0242403
STK38L serine/threonine kinase 38 like 0.0240471
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0233244
NTN4 netrin 4 0.022983
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0218513
DPYSL3 dihydropyrimidinase-like 3 0.0218072
RAD51B RAD51 paralog B 0.0206017
MYH9 myosin, heavy chain 9, non-muscle 0.0205213
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0204866
CD44 CD44 molecule (Indian blood group) 0.020407
EZR ezrin 0.0194335
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0192327
IL1R1 interleukin 1 receptor, type I 0.0181324
PLEC plectin 0.0169431
KYNU kynureninase 0.0168407
WWTR1 WW domain containing transcription regulator 1 0.0164544
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0162826
SVIL supervillin 0.0160954
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0154606
TBC1D5 TBC1 domain family, member 5 0.0150835
WLS wntless Wnt ligand secretion mediator 0.0150809
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0148917
LAMA4 laminin, alpha 4 0.0146605
MX1 MX dynamin-like GTPase 1 0.0146549
TGM2 transglutaminase 2 0.0139924
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0138494
SLTM SAFB-like, transcription modulator 0.0137726
RUNX2 runt-related transcription factor 2 0.0134437
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0133112
LAMB1 laminin, beta 1 0.0132683
HEG1 heart development protein with EGF-like domains 1 0.0132389
FHIT fragile histidine triad 0.0131706
IGFBP3 insulin-like growth factor binding protein 3 0.0131426
ARHGAP21 Rho GTPase activating protein 21 0.0130365
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0130255
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0129812
ARHGAP42 Rho GTPase activating protein 42 0.0128438
SRRM2 serine/arginine repetitive matrix 2 0.0127721
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0127422
KSR1 kinase suppressor of ras 1 0.0125528
LGALS12 lectin, galactoside-binding, soluble, 12 0.0123305
ZNF385D zinc finger protein 385D 0.0122311
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0121868
SUMF1 sulfatase modifying factor 1 0.0120479
MAML2 mastermind-like 2 (Drosophila) 0.0118278
FLNA filamin A, alpha 0.011821
MIPOL1 mirror-image polydactyly 1 0.0117677
MAP1B microtubule-associated protein 1B 0.011749
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0117198
ADD3 adducin 3 (gamma) 0.0116169
EIF5 eukaryotic translation initiation factor 5 0.0115048
ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 0.0114544
ECE1 endothelin converting enzyme 1 0.0114539
PARD3B par-3 family cell polarity regulator beta 0.0113863
SHB Src homology 2 domain containing adaptor protein B 0.0113012
TXNRD1 thioredoxin reductase 1 0.0109019
SYNJ2 synaptojanin 2 0.010883
IL6ST interleukin 6 signal transducer 0.0107434
IRAK2 interleukin-1 receptor-associated kinase 2 0.0106086
CDCP1 CUB domain containing protein 1 0.0104609
HIPK2 homeodomain interacting protein kinase 2 0.0104539
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.010419
RDH10 retinol dehydrogenase 10 (all-trans) 0.0103074
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0102169
VEGFC vascular endothelial growth factor C 0.0102166
ZNF804A zinc finger protein 804A 0.0100766
EXOC6B exocyst complex component 6B 0.0100304
MSN moesin 0.0100249
STX1A syntaxin 1A (brain) 0.00998989
IGSF1 immunoglobulin superfamily, member 1 0.00992055
UBE2E3 ubiquitin-conjugating enzyme E2E 3 0.00991946
STPG2 sperm-tail PG-rich repeat containing 2 0.00989114
ARHGAP26 Rho GTPase activating protein 26 0.00980299
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.00974208
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.00973431
CEP250 centrosomal protein 250kDa 0.00969859
PSME4 proteasome (prosome, macropain) activator subunit 4 0.00961519
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.009593
PTPRM protein tyrosine phosphatase, receptor type, M 0.00957754
POU6F2 POU class 6 homeobox 2 0.00953438
CAPRIN2 caprin family member 2 0.00950506
MYO10 myosin X 0.0093852
PLXNA1 plexin A1 0.00924714
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.00920887
KCTD16 potassium channel tetramerization domain containing 16 0.00919982
WWOX WW domain containing oxidoreductase 0.00909374
RIMS2 regulating synaptic membrane exocytosis 2 0.00907036

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.252969
TMSB10 thymosin beta 10 -0.239994
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.180599
CXCL8 chemokine (C-X-C motif) ligand 8 -0.14682
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.128043
FTL ferritin, light polypeptide -0.104042
PTMA prothymosin, alpha -0.103369
STC1 stanniocalcin 1 -0.101498
TFPI2 tissue factor pathway inhibitor 2 -0.0893503
SDK1 sidekick cell adhesion molecule 1 -0.0890711
RPLP1 ribosomal protein, large, P1 -0.087575
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0849803
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0844917
RAB1A RAB1A, member RAS oncogene family -0.0836734
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0728487
GOLGA4 golgin A4 -0.0725244
MT2A metallothionein 2A -0.0723911
EIF1 eukaryotic translation initiation factor 1 -0.0705864
RPL35A ribosomal protein L35a -0.069013
TPT1 tumor protein, translationally-controlled 1 -0.0688543
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0675927
S100A6 S100 calcium binding protein A6 -0.0658653
B2M beta-2-microglobulin -0.0646899
USP34 ubiquitin specific peptidase 34 -0.064608
LMAN1 lectin, mannose-binding, 1 -0.0643592
RPS19 ribosomal protein S19 -0.06337
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0608878
NAP1L1 nucleosome assembly protein 1-like 1 -0.0594488
ZMYND8 zinc finger, MYND-type containing 8 -0.057182
WSB1 WD repeat and SOCS box containing 1 -0.0564493
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.056308
CDH13 cadherin 13 -0.0558624
NDRG1 N-myc downstream regulated 1 -0.0542927
RPS8 ribosomal protein S8 -0.0531427
RPL34 ribosomal protein L34 -0.0526295
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0525222
ENO1 enolase 1, (alpha) -0.0516133
RPS21 ribosomal protein S21 -0.0514371
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0511167
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0500346
LDHA lactate dehydrogenase A -0.0498195
RPS6 ribosomal protein S6 -0.0492111
RPS24 ribosomal protein S24 -0.0489995
BTG1 B-cell translocation gene 1, anti-proliferative -0.0476188
NAMPT nicotinamide phosphoribosyltransferase -0.04747
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0472872
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0468495
RPL31 ribosomal protein L31 -0.046568
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0465558
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0456148
RPL37A ribosomal protein L37a -0.0455519
MTSS1 metastasis suppressor 1 -0.0443694
SEC31A SEC31 homolog A (S. cerevisiae) -0.0442152
HMGA1 high mobility group AT-hook 1 -0.0440076
MEF2A myocyte enhancer factor 2A -0.0439729
FAM20C family with sequence similarity 20, member C -0.0438554
IER3 immediate early response 3 -0.0432099
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0428071
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0427329
TM4SF1 transmembrane 4 L six family member 1 -0.0425701
RPL23 ribosomal protein L23 -0.0421036
TIMP1 TIMP metallopeptidase inhibitor 1 -0.04192
RPLP2 ribosomal protein, large, P2 -0.0410476
RPS13 ribosomal protein S13 -0.0406986
RPS29 ribosomal protein S29 -0.0404708
RPLP0 ribosomal protein, large, P0 -0.0402678
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0398512
DLG1 discs, large homolog 1 (Drosophila) -0.0397735
TMEM165 transmembrane protein 165 -0.0393408
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0393264
GNAS GNAS complex locus -0.0390005
NUMB numb homolog (Drosophila) -0.0389456
RPL32 ribosomal protein L32 -0.0389036
AKAP13 A kinase (PRKA) anchor protein 13 -0.038852
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.038793
TAS2R14 taste receptor, type 2, member 14 -0.0386547
RIOK3 RIO kinase 3 -0.0386185
PNRC1 proline-rich nuclear receptor coactivator 1 -0.038585
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0371475
PRRC2C proline-rich coiled-coil 2C -0.0369309
PGK1 phosphoglycerate kinase 1 -0.0367606
TMEM263 transmembrane protein 263 -0.0367193
HLA-B major histocompatibility complex, class I, B -0.0366125
AKAP12 A kinase (PRKA) anchor protein 12 -0.03634
PCBP2 poly(rC) binding protein 2 -0.0362239
KDM2A lysine (K)-specific demethylase 2A -0.0360436
RBM39 RNA binding motif protein 39 -0.0360307
CALU calumenin -0.0359188
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0355688
RPS25 ribosomal protein S25 -0.0352256
TTC3 tetratricopeptide repeat domain 3 -0.0345401
S100A10 S100 calcium binding protein A10 -0.0343208
RPL11 ribosomal protein L11 -0.0342051
RPS11 ribosomal protein S11 -0.0340002
HM13 histocompatibility (minor) 13 -0.0338677
HDLBP high density lipoprotein binding protein -0.0338391
CAMK1D calcium/calmodulin-dependent protein kinase ID -0.0338027
POTEF POTE ankyrin domain family, member F -0.0337436
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0330811
RPL37 ribosomal protein L37 -0.0327949