RAD23B Gene Set

Dataset MSigDB Cancer Gene Co-expression Modules
Category transcriptomics
Type co-expressed gene
Description RAD23 homolog B (S. cerevisiae)|The protein encoded by this gene is one of two human homologs of Saccharomyces cerevisiae Rad23, a protein involved in the nucleotide excision repair (NER). This protein was found to be a component of the protein complex that specifically complements the NER defect of xeroderma pigmentosum group C (XP-c) cell extracts in vitro. This protein was also shown to interact with, and elevate the nucleotide excision activity of 3-methyladenine-DNA glycosylase (MPG), which suggested a role in DNA damage recognition in base excision repair. This protein contains an N-terminal ubiquitin-like domain, which was reported to interact with 26S proteasome, and thus this protein may be involved in the ubiquitin mediated proteolytic pathway in cells. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Sep 2011] (NCBI Entrez Gene Database, 5887)
External Link http://www.broadinstitute.org/gsea/msigdb/cards/MORF_RAD23B
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Genes

179 co-expressed genes for RAD23B from the MSigDB Cancer Gene Co-expression Modules dataset.

Symbol Name
ADAR adenosine deaminase, RNA-specific
ALG8 ALG8, alpha-1,3-glucosyltransferase
AP2S1 adaptor-related protein complex 2, sigma 1 subunit
ARCN1 archain 1
ARF3 ADP-ribosylation factor 3
ATOX1 antioxidant 1 copper chaperone
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
ATP5J ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
ATP5J2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
BAG5 BCL2-associated athanogene 5
BANF1 barrier to autointegration factor 1
BCAP31 B-cell receptor-associated protein 31
BUD31 BUD31 homolog (S. cerevisiae)
BZW1 basic leucine zipper and W2 domains 1
C21ORF33 chromosome 21 open reading frame 33
C6ORF62 chromosome 6 open reading frame 62
CANX calnexin
CFDP1 craniofacial development protein 1
CLN3 ceroid-lipofuscinosis, neuronal 3
CNBP CCHC-type zinc finger, nucleic acid binding protein
CNIH1 cornichon family AMPA receptor auxiliary protein 1
COA1 cytochrome c oxidase assembly factor 1 homolog (S. cerevisiae)
COG4 component of oligomeric golgi complex 4
COIL coilin
COPB2 coatomer protein complex, subunit beta 2 (beta prime)
COPS5 COP9 signalosome subunit 5
COX4I1 cytochrome c oxidase subunit IV isoform 1
COX5A cytochrome c oxidase subunit Va
CRK v-crk avian sarcoma virus CT10 oncogene homolog
CSNK2B casein kinase 2, beta polypeptide
CYC1 cytochrome c-1
CYCS cytochrome c, somatic
DAP death-associated protein
DCTN2 dynactin 2 (p50)
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1
DLD dihydrolipoamide dehydrogenase
DNPEP aspartyl aminopeptidase
DPM1 dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2
EBAG9 estrogen receptor binding site associated, antigen, 9
EIF2B2 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
EIF2B4 eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa
EIF4E2 eukaryotic translation initiation factor 4E family member 2
EIF5 eukaryotic translation initiation factor 5
ENSA endosulfine alpha
ETFA electron-transfer-flavoprotein, alpha polypeptide
FAM120A family with sequence similarity 120A
FAM20B family with sequence similarity 20, member B
FBXW11 F-box and WD repeat domain containing 11
G3BP1 GTPase activating protein (SH3 domain) binding protein 1
GGCT gamma-glutamylcyclotransferase
GMFB glia maturation factor, beta
GSPT1 G1 to S phase transition 1
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HAT1 histone acetyltransferase 1
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B
HSBP1 heat shock factor binding protein 1
HSPA4 heat shock 70kDa protein 4
HSPA9 heat shock 70kDa protein 9 (mortalin)
KARS lysyl-tRNA synthetase
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1
KIF2A kinesin heavy chain member 2A
KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
LYPLA1 lysophospholipase I
MAD2L1BP MAD2L1 binding protein
MAML1 mastermind-like 1 (Drosophila)
MAPK6 mitogen-activated protein kinase 6
MBD4 methyl-CpG binding domain protein 4
MDH1 malate dehydrogenase 1, NAD (soluble)
MORF4L2 mortality factor 4 like 2
MTA1 metastasis associated 1
MTDH metadherin
MYL12B myosin, light chain 12B, regulatory
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa
NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
NEDD8 neural precursor cell expressed, developmentally down-regulated 8
NSDHL NAD(P) dependent steroid dehydrogenase-like
PARG poly (ADP-ribose) glycohydrolase
PDAP1 PDGFA associated protein 1
PDCD6 programmed cell death 6
PEX11B peroxisomal biogenesis factor 11 beta
PGRMC1 progesterone receptor membrane component 1
POLR2I polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa
POP5 processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme
PPP1R7 protein phosphatase 1, regulatory subunit 7
PPP2R1A protein phosphatase 2, regulatory subunit A, alpha
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha
PPP2R4 protein phosphatase 2A activator, regulatory subunit 4
PPP6C protein phosphatase 6, catalytic subunit
PRDX3 peroxiredoxin 3
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PRMT1 protein arginine methyltransferase 1
PRPSAP1 phosphoribosyl pyrophosphate synthetase-associated protein 1
PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3
PSMB2 proteasome (prosome, macropain) subunit, beta type, 2
PSMB4 proteasome (prosome, macropain) subunit, beta type, 4
PSMB5 proteasome (prosome, macropain) subunit, beta type, 5
PSMB6 proteasome (prosome, macropain) subunit, beta type, 6
PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2
PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3
PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8
PSMD9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
RAB1A RAB1A, member RAS oncogene family
RAB5A RAB5A, member RAS oncogene family
RAB9A RAB9A, member RAS oncogene family
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
RAD21 RAD21 homolog (S. pombe)
RAD23B RAD23 homolog B (S. cerevisiae)
RARS arginyl-tRNA synthetase
RER1 retention in endoplasmic reticulum sorting receptor 1
RFK riboflavin kinase
RNF6 ring finger protein (C3H2C3 type) 6
RPA1 replication protein A1, 70kDa
RPL36AL ribosomal protein L36a-like
RPP38 ribonuclease P/MRP 38kDa subunit
RUSC1 RUN and SH3 domain containing 1
SARS seryl-tRNA synthetase
SART3 squamous cell carcinoma antigen recognized by T cells 3
SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
SEC13 SEC13 homolog (S. cerevisiae)
SEC61G Sec61 gamma subunit
SEPHS2 selenophosphate synthetase 2
SET SET nuclear proto-oncogene
SF3B2 splicing factor 3b, subunit 2, 145kDa
SHFM1 split hand/foot malformation (ectrodactyly) type 1
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SKP1 S-phase kinase-associated protein 1
SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
SMG7 SMG7 nonsense mediated mRNA decay factor
SNRPG small nuclear ribonucleoprotein polypeptide G
SOD1 superoxide dismutase 1, soluble
SP3 Sp3 transcription factor
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae)
SPTLC1 serine palmitoyltransferase, long chain base subunit 1
SRP19 signal recognition particle 19kDa
SRP9 signal recognition particle 9kDa
SSBP1 single-stranded DNA binding protein 1, mitochondrial
STOML2 stomatin (EPB72)-like 2
SUMO1 small ubiquitin-like modifier 1
SYPL1 synaptophysin-like 1
TBCA tubulin folding cofactor A
TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
TCEB2 transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B)
TMBIM6 transmembrane BAX inhibitor motif containing 6
TMED2 transmembrane emp24 domain trafficking protein 2
TMEM106C transmembrane protein 106C
TMEM147 transmembrane protein 147
TMEM97 transmembrane protein 97
TOP1P2 topoisomerase (DNA) I pseudogene 2
TPGS2 tubulin polyglutamylase complex subunit 2
TRAPPC3 trafficking protein particle complex 3
TUG1 taurine up-regulated 1 (non-protein coding)
UBA1 ubiquitin-like modifier activating enzyme 1
UBAP2L ubiquitin associated protein 2-like
UBE4A ubiquitination factor E4A
UBR5 ubiquitin protein ligase E3 component n-recognin 5
UNG uracil-DNA glycosylase
URI1 URI1, prefoldin-like chaperone
URM1 ubiquitin related modifier 1
USP10 ubiquitin specific peptidase 10
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast)
VCP valosin containing protein
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae)
VTI1B vesicle transport through interaction with t-SNAREs 1B
XPC xeroderma pigmentosum, complementation group C
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon
ZZZ3 zinc finger, ZZ-type containing 3