RBM8A Gene Set

Dataset MSigDB Cancer Gene Co-expression Modules
Category transcriptomics
Type co-expressed gene
Description RNA binding motif protein 8A|This gene encodes a protein with a conserved RNA-binding motif. The protein is found predominantly in the nucleus, although it is also present in the cytoplasm. It is preferentially associated with mRNAs produced by splicing, including both nuclear mRNAs and newly exported cytoplasmic mRNAs. It is thought that the protein remains associated with spliced mRNAs as a tag to indicate where introns had been present, thus coupling pre- and post-mRNA splicing events. Previously, it was thought that two genes encode this protein, RBM8A and RBM8B; it is now thought that the RBM8B locus is a pseudogene. There are two alternate translation start codons with this gene, which result in two forms of the protein. An allele mutation and a low-frequency noncoding single-nucleotide polymorphism (SNP) in this gene cause thrombocytopenia-absent radius (TAR) syndrome. [provided by RefSeq, Jul 2013] (NCBI Entrez Gene Database, 9939)
External Link http://www.broadinstitute.org/gsea/msigdb/cards/MORF_RBM8A
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Genes

162 co-expressed genes for RBM8A from the MSigDB Cancer Gene Co-expression Modules dataset.

Symbol Name
ACR acrosin
ADAM15 ADAM metallopeptidase domain 15
ADAMTSL2 ADAMTS-like 2
ADO 2-aminoethanethiol (cysteamine) dioxygenase
AGER advanced glycosylation end product-specific receptor
AMELX amelogenin, X-linked
ANKRD12 ankyrin repeat domain 12
APBB3 amyloid beta (A4) precursor protein-binding, family B, member 3
ASB3 ankyrin repeat and SOCS box containing 3
ATG4B autophagy related 4B, cysteine peptidase
BAZ2A bromodomain adjacent to zinc finger domain, 2A
BRPF3 bromodomain and PHD finger containing, 3
C11ORF95 chromosome 11 open reading frame 95
C2CD5 C2 calcium-dependent domain containing 5
C5ORF51 chromosome 5 open reading frame 51
CAMK2B calcium/calmodulin-dependent protein kinase II beta
CAND1 cullin-associated and neddylation-dissociated 1
CARD10 caspase recruitment domain family, member 10
CASP2 caspase 2, apoptosis-related cysteine peptidase
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35)
CELF1 CUGBP, Elav-like family member 1
CEP170 centrosomal protein 170kDa
CHTOP chromatin target of PRMT1
CLEC16A C-type lectin domain family 16, member A
CNOT4 CCR4-NOT transcription complex, subunit 4
CNTN1 contactin 1
CRCP CGRP receptor component
CRNKL1 crooked neck pre-mRNA splicing factor 1
CSRNP2 cysteine-serine-rich nuclear protein 2
DCAF7 DDB1 and CUL4 associated factor 7
DCTN4 dynactin 4 (p62)
DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide
DGCR11 DiGeorge syndrome critical region gene 11 (non-protein coding)
DHX40 DEAH (Asp-Glu-Ala-His) box polypeptide 40
DMWD dystrophia myotonica, WD repeat containing
EML3 echinoderm microtubule associated protein like 3
EPC2 enhancer of polycomb homolog 2 (Drosophila)
EPOR erythropoietin receptor
EXOC5 exocyst complex component 5
F7 coagulation factor VII (serum prothrombin conversion accelerator)
FAM172A family with sequence similarity 172, member A
FAM189A2 family with sequence similarity 189, member A2
FBXO30 F-box protein 30
FDXR ferredoxin reductase
FKBP15 FK506 binding protein 15, 133kDa
FOXO3 forkhead box O3
GHITM growth hormone inducible transmembrane protein
GPA33 glycoprotein A33 (transmembrane)
GPR161 G protein-coupled receptor 161
GPRIN2 G protein regulated inducer of neurite outgrowth 2
GSK3A glycogen synthase kinase 3 alpha
GSK3B glycogen synthase kinase 3 beta
GSPT1 G1 to S phase transition 1
GSTA4 glutathione S-transferase alpha 4
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
HAUS5 HAUS augmin-like complex, subunit 5
HMGXB3 HMG box domain containing 3
HSF4 heat shock transcription factor 4
HSPB2 heat shock 27kDa protein 2
HTR2A 5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
IFT140 intraflagellar transport 140
IGHMBP2 immunoglobulin mu binding protein 2
IGSF9B immunoglobulin superfamily, member 9B
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IPO7 importin 7
IPO9 importin 9
IQCK IQ motif containing K
ISCA1 iron-sulfur cluster assembly 1
ITGAD integrin, alpha D
KAT7 K(lysine) acetyltransferase 7
KHNYN KH and NYN domain containing
KIAA0195 KIAA0195
KIDINS220 kinase D-interacting substrate, 220kDa
KMT2A lysine (K)-specific methyltransferase 2A
LMTK2 lemur tyrosine kinase 2
LSM12 LSM12 homolog (S. cerevisiae)
LTK leukocyte receptor tyrosine kinase
MAG myelin associated glycoprotein
MAP6 microtubule-associated protein 6
MC2R melanocortin 2 receptor (adrenocorticotropic hormone)
MED13 mediator complex subunit 13
MED17 mediator complex subunit 17
MFAP3 microfibrillar-associated protein 3
MMP25 matrix metallopeptidase 25
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
MTMR3 myotubularin related protein 3
MVK mevalonate kinase
MYL2 myosin, light chain 2, regulatory, cardiac, slow
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1)
NCAM1 neural cell adhesion molecule 1
NCOA5 nuclear receptor coactivator 5
NFYA nuclear transcription factor Y, alpha
NGRN neugrin, neurite outgrowth associated
NTNG1 netrin G1
NTSR2 neurotensin receptor 2
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3
NUP133 nucleoporin 133kDa
ODF1 outer dense fiber of sperm tails 1
PAX8 paired box 8
PCBP3 poly(rC) binding protein 3
PFDN1 prefoldin subunit 1
PGRMC2 progesterone receptor membrane component 2
PHC1 polyhomeotic homolog 1 (Drosophila)
PHF2 PHD finger protein 2
PIGB phosphatidylinositol glycan anchor biosynthesis, class B
PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1
PKN2 protein kinase N2
PKNOX1 PBX/knotted 1 homeobox 1
PMF1 polyamine-modulated factor 1
PML promyelocytic leukemia
PNMT phenylethanolamine N-methyltransferase
POGZ pogo transposable element with ZNF domain
PRPH peripherin
PRRC2B proline-rich coiled-coil 2B
PRSS16 protease, serine, 16 (thymus)
PTGER3 prostaglandin E receptor 3 (subtype EP3)
PTPN9 protein tyrosine phosphatase, non-receptor type 9
RAN RAN, member RAS oncogene family
RBBP8 retinoblastoma binding protein 8
RBM4B RNA binding motif protein 4B
RBM8A RNA binding motif protein 8A
RPL7L1 ribosomal protein L7-like 1
SCARB2 scavenger receptor class B, member 2
SEMA4D sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
SETD5 SET domain containing 5
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC22A24 solute carrier family 22, member 24
SLC25A29 solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29
SLC5A2 solute carrier family 5 (sodium/glucose cotransporter), member 2
SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9
SPAG9 sperm associated antigen 9
SYNC syncoilin, intermediate filament protein
TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
TAGLN3 transgelin 3
TCF7 transcription factor 7 (T-cell specific, HMG-box)
TCOF1 Treacher Collins-Franceschetti syndrome 1
TIA1 TIA1 cytotoxic granule-associated RNA binding protein
TNP1 transition protein 1 (during histone to protamine replacement)
TPMT thiopurine S-methyltransferase
TRA2A transformer 2 alpha homolog (Drosophila)
TSPO2 translocator protein 2
TUB tubby bipartite transcription factor
UBE2E3 ubiquitin-conjugating enzyme E2E 3
UBE2N ubiquitin-conjugating enzyme E2N
UBE3A ubiquitin protein ligase E3A
USP19 ubiquitin specific peptidase 19
USP9X ubiquitin specific peptidase 9, X-linked
VASH1 vasohibin 1
VEZF1 vascular endothelial zinc finger 1
VPS26B vacuolar protein sorting 26 homolog B (S. pombe)
WHSC1 Wolf-Hirschhorn syndrome candidate 1
ZBED1 zinc finger, BED-type containing 1
ZKSCAN3 zinc finger with KRAB and SCAN domains 3
ZNF286A zinc finger protein 286A
ZNF292 zinc finger protein 292
ZNF384 zinc finger protein 384
ZNF512 zinc finger protein 512
ZNF529 zinc finger protein 529
ZNF592 zinc finger protein 592
ZNF84 zinc finger protein 84