RCC-ER Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from kidney (Catalogue of Somatic Mutations In Cancer)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00820
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Genes

200 proteins associated with the cell line RCC-ER from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group)
ABLIM3 actin binding LIM protein family, member 3
AGTPBP1 ATP/GTP binding protein 1
AHSG alpha-2-HS-glycoprotein
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase)
ALDH18A1 aldehyde dehydrogenase 18 family, member A1
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ALDOA aldolase A, fructose-bisphosphate
ALDOC aldolase C, fructose-bisphosphate
ALMS1 Alstrom syndrome protein 1
AMPD2 adenosine monophosphate deaminase 2
ANXA4 annexin A4
ARHGAP1 Rho GTPase activating protein 1
ASL argininosuccinate lyase
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2
CBR1 carbonyl reductase 1
CLASP2 cytoplasmic linker associated protein 2
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family)
COG6 component of oligomeric golgi complex 6
COPD2 Chronic obstructive pulmonary disease QTL 2
COPG1 coatomer protein complex, subunit gamma 1
CRYZ crystallin, zeta (quinone reductase)
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
DNM2 dynamin 2
DNM3 dynamin 3
DPYSL3 dihydropyrimidinase-like 3
EPDR1 ependymin related 1
FAH fumarylacetoacetate hydrolase (fumarylacetoacetase)
FAM114A1 family with sequence similarity 114, member A1
G6PD glucose-6-phosphate dehydrogenase
GBE1 glucan (1,4-alpha-), branching enzyme 1
GCLM glutamate-cysteine ligase, modifier subunit
GFPT1 glutamine--fructose-6-phosphate transaminase 1
GLRX glutaredoxin (thioltransferase)
GLS glutaminase
GLS2 glutaminase 2 (liver, mitochondrial)
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa
HK2 hexokinase 2
HPCAL1 hippocalcin-like 1
HSPA12A heat shock 70kDa protein 12A
IL18R1 interleukin 18 receptor 1
ITGA1 integrin, alpha 1
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2
KBTBD2 kelch repeat and BTB (POZ) domain containing 2
LDHAL6B lactate dehydrogenase A-like 6B
LIMCH1 LIM and calponin homology domains 1
LMAN1 lectin, mannose-binding, 1
LOC105375357 uncharacterized LOC105375357
LPCAT1 lysophosphatidylcholine acyltransferase 1
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3
MAP3K20 mitogen-activated protein kinase kinase kinase 20
MAPK3 mitogen-activated protein kinase 3
MYADM myeloid-associated differentiation marker
NAGK N-acetylglucosamine kinase
NDRG1 N-myc downstream regulated 1
NNMT nicotinamide N-methyltransferase
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain)
OR8B8 olfactory receptor, family 8, subfamily B, member 8
PDCD2L programmed cell death 2-like
PDXK pyridoxal (pyridoxine, vitamin B6) kinase
PEX1 peroxisomal biogenesis factor 1
PFKP phosphofructokinase, platelet
PGAM1 phosphoglycerate mutase 1 (brain)
PGM3 phosphoglucomutase 3
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit
PPME1 protein phosphatase methylesterase 1
PRRC1 proline-rich coiled-coil 1
PRRC2B proline-rich coiled-coil 2B
PTGR1 prostaglandin reductase 1
RAB1A RAB1A, member RAS oncogene family
RHEB Ras homolog enriched in brain
RIC8A RIC8 guanine nucleotide exchange factor A
RNASET2 ribonuclease T2
SDE2 SDE2 telomere maintenance homolog (S. pombe)
SEC13 SEC13 homolog (S. cerevisiae)
SEC22B SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)
SEC23A Sec23 homolog A (S. cerevisiae)
SEC24A SEC24 family member A
SEC24D SEC24 family member D
SEC31A SEC31 homolog A (S. cerevisiae)
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1
SOD2 superoxide dismutase 2, mitochondrial
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
STXBP2 syntaxin binding protein 2
THTPA thiamine triphosphatase
TLR3 toll-like receptor 3
TRIP6 thyroid hormone receptor interactor 6
TXNRD1 thioredoxin reductase 1
UBA6 ubiquitin-like modifier activating enzyme 6
UGDH UDP-glucose 6-dehydrogenase
USP21 ubiquitin specific peptidase 21
UXS1 UDP-glucuronate decarboxylase 1
WDR74 WD repeat domain 74
YIPF5 Yip1 domain family, member 5
YKT6 YKT6 v-SNARE homolog (S. cerevisiae)
ZWILCH zwilch kinetochore protein

Symbol Name
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase
BCAS2 breast carcinoma amplified sequence 2
BCLAF1 BCL2-associated transcription factor 1
BMS1 BMS1 ribosome biogenesis factor
C1QBP complement component 1, q subcomponent binding protein
CBX3 chromobox homolog 3
CHAF1B chromatin assembly factor 1, subunit B (p60)
CHD4 chromodomain helicase DNA binding protein 4
CHERP calcium homeostasis endoplasmic reticulum protein
CLDN12 claudin 12
COX4I1 cytochrome c oxidase subunit IV isoform 1
COX5A cytochrome c oxidase subunit Va
COX6B1 cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)
COX7C cytochrome c oxidase subunit VIIc
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
CWC15 CWC15 spliceosome-associated protein
DCAF8 DDB1 and CUL4 associated factor 8
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5
DHRS13 dehydrogenase/reductase (SDR family) member 13
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8
EHMT1 euchromatic histone-lysine N-methyltransferase 1
ENY2 enhancer of yellow 2 homolog (Drosophila)
EPCAM epithelial cell adhesion molecule
ERH enhancer of rudimentary homolog (Drosophila)
EXOSC10 exosome component 10
EXOSC7 exosome component 7
FAM120B family with sequence similarity 120B
FAM207A family with sequence similarity 207, member A
GLRX5 glutaredoxin 5
GRSF1 G-rich RNA sequence binding factor 1
GTF3C3 general transcription factor IIIC, polypeptide 3, 102kDa
HDHD2 haloacid dehalogenase-like hydrolase domain containing 2
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H')
HNRNPR heterogeneous nuclear ribonucleoprotein R
HSP90AA4P heat shock protein 90kDa alpha (cytosolic), class A member 4, pseudogene
HTATSF1 HIV-1 Tat specific factor 1
IDI1 isopentenyl-diphosphate delta isomerase 1
IK IK cytokine, down-regulator of HLA II
ISY1 ISY1 splicing factor homolog (S. cerevisiae)
LOC646626 uncharacterized LOC646626
LUC7L3 LUC7-like 3 (S. cerevisiae)
MEAF6 MYST/Esa1-associated factor 6
MED30 mediator complex subunit 30
MRPL12 mitochondrial ribosomal protein L12
MRPL52 mitochondrial ribosomal protein L52
MRPL54 mitochondrial ribosomal protein L54
MRPS18C mitochondrial ribosomal protein S18C
MRPS25 mitochondrial ribosomal protein S25
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)
NUP62 nucleoporin 62kDa
PDS5A PDS5 cohesin associated factor A
PHF5A PHD finger protein 5A
PNN pinin, desmosome associated protein
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
POLR2F polymerase (RNA) II (DNA directed) polypeptide F
POLR2I polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa
PPHLN1 periphilin 1
PQBP1 polyglutamine binding protein 1
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
RAD21 RAD21 homolog (S. pombe)
RBM25 RNA binding motif protein 25
RBM3 RNA binding motif (RNP1, RRM) protein 3
RBM6 RNA binding motif protein 6
SAFB scaffold attachment factor B
SCO1 SCO1 cytochrome c oxidase assembly protein
SETD3 SET domain containing 3
SF3B1 splicing factor 3b, subunit 1, 155kDa
SF3B2 splicing factor 3b, subunit 2, 145kDa
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SNRPA1 small nuclear ribonucleoprotein polypeptide A'
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa
SNRPD2 small nuclear ribonucleoprotein D2 polypeptide 16.5kDa
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa
SNRPE small nuclear ribonucleoprotein polypeptide E
SNRPF small nuclear ribonucleoprotein polypeptide F
SNW1 SNW domain containing 1
SON SON DNA binding protein
SRSF1 serine/arginine-rich splicing factor 1
SRSF3 serine/arginine-rich splicing factor 3
SRSF5 serine/arginine-rich splicing factor 5
SRSF6 serine/arginine-rich splicing factor 6
TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast)
TMCO3 transmembrane and coiled-coil domains 3
TOX4 TOX high mobility group box family member 4
TRMT6 tRNA methyltransferase 6
U2AF2 U2 small nuclear RNA auxiliary factor 2
WTAP Wilms tumor 1 associated protein
YME1L1 YME1-like 1 ATPase
ZADH2 zinc binding alcohol dehydrogenase domain containing 2
ZC3H14 zinc finger CCCH-type containing 14
ZCCHC8 zinc finger, CCHC domain containing 8
ZMAT2 zinc finger, matrin-type 2
ZNF207 zinc finger protein 207