RCC-JF Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from kidney (Catalogue of Somatic Mutations In Cancer)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00818
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Genes

198 proteins associated with the cell line RCC-JF from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ACLY ATP citrate lyase
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase)
ALDH16A1 aldehyde dehydrogenase 16 family, member A1
AMPD2 adenosine monophosphate deaminase 2
ANXA4 annexin A4
APOL2 apolipoprotein L, 2
ATXN10 ataxin 10
BLOC1S4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino
BMP2K BMP2 inducible kinase
CASP8 caspase 8, apoptosis-related cysteine peptidase
CD70 CD70 molecule
CENPB centromere protein B, 80kDa
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family)
COG7 component of oligomeric golgi complex 7
COL4A2 collagen, type IV, alpha 2
COPG1 coatomer protein complex, subunit gamma 1
COPZ1 coatomer protein complex, subunit zeta 1
CRYZ crystallin, zeta (quinone reductase)
CTSD cathepsin D
DCTN4 dynactin 4 (p62)
DERA deoxyribose-phosphate aldolase (putative)
DHX57 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
DNM2 dynamin 2
DNM3 dynamin 3
ECHDC1 ethylmalonyl-CoA decarboxylase 1
EFCAB5 EF-hand calcium binding domain 5
EHD4 EH-domain containing 4
EML2 echinoderm microtubule associated protein like 2
EPS8L2 EPS8-like 2
EREG epiregulin
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
FLII flightless I homolog (Drosophila)
FLJ31662 uncharacterized LOC440594
GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1
GFPT1 glutamine--fructose-6-phosphate transaminase 1
GLS glutaminase
GLS2 glutaminase 2 (liver, mitochondrial)
GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
HNRNPLL heterogeneous nuclear ribonucleoprotein L-like
HOMER3 homer scaffolding protein 3
IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
IFT22 intraflagellar transport 22
IKBIP IKBKB interacting protein
IL18R1 interleukin 18 receptor 1
IRAK1 interleukin-1 receptor-associated kinase 1
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
KBTBD11 kelch repeat and BTB (POZ) domain containing 11
LINC00919 long intergenic non-protein coding RNA 919
LTV1 LTV1 ribosome biogenesis factor
MACF1 microtubule-actin crosslinking factor 1
MEAF6 MYST/Esa1-associated factor 6
METAP1 methionyl aminopeptidase 1
METTL2B methyltransferase like 2B
MIR6812 microRNA 6812
NIT2 nitrilase family, member 2
NMRK2 nicotinamide riboside kinase 2
NNMT nicotinamide N-methyltransferase
NOP53 NOP53 ribosome biogenesis factor
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae)
PARD3 par-3 family cell polarity regulator
PAWR PRKC, apoptosis, WT1, regulator
PDXK pyridoxal (pyridoxine, vitamin B6) kinase
PDZD11 PDZ domain containing 11
PDZK1 PDZ domain containing 1
PEG10 paternally expressed 10
PFKP phosphofructokinase, platelet
PGM3 phosphoglucomutase 3
PHLDB1 pleckstrin homology-like domain, family B, member 1
PLAA phospholipase A2-activating protein
PLCB4 phospholipase C, beta 4
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2
PLEKHA5 pleckstrin homology domain containing, family A member 5
PPME1 protein phosphatase methylesterase 1
PRPS1 phosphoribosyl pyrophosphate synthetase 1
QPRT quinolinate phosphoribosyltransferase
RAB28P1 RAB28, member RAS oncogene family pseudogene 1
RASA1 RAS p21 protein activator (GTPase activating protein) 1
RBPMS RNA binding protein with multiple splicing
RDX radixin
RIC8A RIC8 guanine nucleotide exchange factor A
RNASET2 ribonuclease T2
RRAD Ras-related associated with diabetes
RXRB retinoid X receptor, beta
SH3GL1 SH3-domain GRB2-like 1
SIRPA signal-regulatory protein alpha
SLC4A4 solute carrier family 4 (sodium bicarbonate cotransporter), member 4
SYT6 synaptotagmin VI
TJP1 tight junction protein 1
TLN1 talin 1
TMEM132A transmembrane protein 132A
TP53BP2 tumor protein p53 binding protein 2
TPM1 tropomyosin 1 (alpha)
TRMT1L tRNA methyltransferase 1 homolog (S. cerevisiae)-like
UBA6 ubiquitin-like modifier activating enzyme 6
VCAN versican
WDR55 WD repeat domain 55
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
ZNF346 zinc finger protein 346

Symbol Name
ACIN1 apoptotic chromatin condensation inducer 1
AIFM2 apoptosis-inducing factor, mitochondrion-associated, 2
ALDH5A1 aldehyde dehydrogenase 5 family, member A1
ALPK3 alpha-kinase 3
ANAPC16 anaphase promoting complex subunit 16
ANKZF1 ankyrin repeat and zinc finger domain containing 1
BAG4 BCL2-associated athanogene 4
BCLAF1 BCL2-associated transcription factor 1
BRD2 bromodomain containing 2
C1ORF109 chromosome 1 open reading frame 109
C2CD5 C2 calcium-dependent domain containing 5
CAMK2D calcium/calmodulin-dependent protein kinase II delta
CD276 CD276 molecule
CHD2 chromodomain helicase DNA binding protein 2
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24
DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
DHX30 DEAH (Asp-Glu-Ala-His) box helicase 30
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36
DIDO1 death inducer-obliterator 1
EED embryonic ectoderm development
EP400 E1A binding protein p400
ERH enhancer of rudimentary homolog (Drosophila)
EVPL envoplakin
EXOSC7 exosome component 7
FABP5P11 fatty acid binding protein 5 pseudogene 11
FAM162A family with sequence similarity 162, member A
FAM8A1 family with sequence similarity 8, member A1
FBLL1 fibrillarin-like 1
FYTTD1 forty-two-three domain containing 1
GLA galactosidase, alpha
GMEB1 glucocorticoid modulatory element binding protein 1
GPATCH8 G patch domain containing 8
HAUS7 HAUS augmin-like complex, subunit 7
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HNRNPM heterogeneous nuclear ribonucleoprotein M
HNRNPR heterogeneous nuclear ribonucleoprotein R
HP1BP3 heterochromatin protein 1, binding protein 3
INCENP inner centromere protein antigens 135/155kDa
INTS2 integrator complex subunit 2
KNOP1 lysine-rich nucleolar protein 1
LSG1 large 60S subunit nuclear export GTPase 1
LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
ME3 malic enzyme 3, NADP(+)-dependent, mitochondrial
MED12 mediator complex subunit 12
MED19 mediator complex subunit 19
MFAP1 microfibrillar-associated protein 1
MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MIER1 mesoderm induction early response 1, transcriptional regulator
MRGBP MRG/MORF4L binding protein
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MXRA7 matrix-remodelling associated 7
NHP2 NHP2 ribonucleoprotein
NNT nicotinamide nucleotide transhydrogenase
NOP56 NOP56 ribonucleoprotein
NOP58 NOP58 ribonucleoprotein
PABPN1 poly(A) binding protein, nuclear 1
PBX3 pre-B-cell leukemia homeobox 3
PCYOX1 prenylcysteine oxidase 1
PNN pinin, desmosome associated protein
RBM25 RNA binding motif protein 25
RBM6 RNA binding motif protein 6
RBM8A RNA binding motif protein 8A
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
RND3 Rho family GTPase 3
RNF2 ring finger protein 2
SAP18 Sin3A-associated protein, 18kDa
SAP30 Sin3A-associated protein, 30kDa
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SF3B1 splicing factor 3b, subunit 1, 155kDa
SF3B6 splicing factor 3b, subunit 6, 14kDa
SFSWAP splicing factor, suppressor of white-apricot family
SLMAP sarcolemma associated protein
SMC5 structural maintenance of chromosomes 5
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa
SPP2 secreted phosphoprotein 2, 24kDa
SPTBN2 spectrin, beta, non-erythrocytic 2
SRSF10 serine/arginine-rich splicing factor 10
SRSF5 serine/arginine-rich splicing factor 5
SRSF7 serine/arginine-rich splicing factor 7
SSRP1 structure specific recognition protein 1
STAG2 stromal antigen 2
STX8 syntaxin 8
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae)
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
TBC1D10A TBC1 domain family, member 10A
TDP2 tyrosyl-DNA phosphodiesterase 2
THOC2 THO complex 2
TLK2 tousled-like kinase 2
TMEM120A transmembrane protein 120A
TOP2B topoisomerase (DNA) II beta 180kDa
TTTY16 testis-specific transcript, Y-linked 16 (non-protein coding)
USP39 ubiquitin specific peptidase 39
VRK3 vaccinia related kinase 3
YEATS2 YEATS domain containing 2
ZMYM2 zinc finger, MYM-type 2