RERF-GC-1B Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Gastric Carcinoma Metastasis (Cell Model Passports, SIDM00358)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM00358
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Genes

197 proteins associated with the cell line RERF-GC-1B from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACAD8 acyl-CoA dehydrogenase family, member 8
AHRR aryl-hydrocarbon receptor repressor
ALMS1 Alstrom syndrome protein 1
AP2A2 adaptor-related protein complex 2, alpha 2 subunit
AP2B1 adaptor-related protein complex 2, beta 1 subunit
AP2M1 adaptor-related protein complex 2, mu 1 subunit
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
BCAM basal cell adhesion molecule (Lutheran blood group)
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
CAPN1 calpain 1, (mu/I) large subunit
CCDC33 coiled-coil domain containing 33
CDC27 cell division cycle 27
CDK1 cyclin-dependent kinase 1
CENPF centromere protein F, 350/400kDa
CEP131 centrosomal protein 131kDa
CHID1 chitinase domain containing 1
COIL coilin
COX7C cytochrome c oxidase subunit VIIc
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
CTSV cathepsin V
DAP3 death associated protein 3
DARS2 aspartyl-tRNA synthetase 2, mitochondrial
DHCR7 7-dehydrocholesterol reductase
EIF4A3 eukaryotic translation initiation factor 4A3
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1
ERGIC3 ERGIC and golgi 3
FAM169A family with sequence similarity 169, member A
FAR1 fatty acyl CoA reductase 1
FMR1 fragile X mental retardation 1
FRRS1 ferric-chelate reductase 1
GRIPAP1 GRIP1 associated protein 1
GSTM3 glutathione S-transferase mu 3 (brain)
HACL1 2-hydroxyacyl-CoA lyase 1
HELZ helicase with zinc finger
HGFAC HGF activator
HMGN3 high mobility group nucleosomal binding domain 3
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
HS1BP3 HCLS1 binding protein 3
IRF2BP2 interferon regulatory factor 2 binding protein 2
JAGN1 jagunal homolog 1 (Drosophila)
KRT1 keratin 1, type II
KRT10 keratin 10, type I
KRT17 keratin 17, type I
KRT9 keratin 9, type I
LAMP1 lysosomal-associated membrane protein 1
LENG1 leukocyte receptor cluster (LRC) member 1
LOC105374691 uncharacterized LOC105374691
MPI mannose phosphate isomerase
MRPL37 mitochondrial ribosomal protein L37
MRPS7 mitochondrial ribosomal protein S7
MT-CO2 cytochrome c oxidase subunit II
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NCOA5 nuclear receptor coactivator 5
NDUFA4 NDUFA4, mitochondrial complex associated
NME6 NME/NM23 nucleoside diphosphate kinase 6
NUDT16L1 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
OAT ornithine aminotransferase
PCYOX1 prenylcysteine oxidase 1
PIK3R4 phosphoinositide-3-kinase, regulatory subunit 4
PLD3 phospholipase D family, member 3
PRMT1 protein arginine methyltransferase 1
PWP1 PWP1 homolog (S. cerevisiae)
RAB15 RAB15, member RAS oncogene family
RAB1B RAB1B, member RAS oncogene family
RAB5A RAB5A, member RAS oncogene family
RAB5B RAB5B, member RAS oncogene family
RBM34 RNA binding motif protein 34
RPRD1B regulation of nuclear pre-mRNA domain containing 1B
RUFY3 RUN and FYVE domain containing 3
SARS2 seryl-tRNA synthetase 2, mitochondrial
SEC13 SEC13 homolog (S. cerevisiae)
SEC61G Sec61 gamma subunit
SF3B1 splicing factor 3b, subunit 1, 155kDa
SFXN1 sideroflexin 1
SHROOM3 shroom family member 3
SLC25A4 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1
SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5)
STIM1 stromal interaction molecule 1
STRBP spermatid perinuclear RNA binding protein
SUN5 Sad1 and UNC84 domain containing 5
SYNGR2 synaptogyrin 2
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
TFAM transcription factor A, mitochondrial
THNSL1 threonine synthase-like 1 (S. cerevisiae)
THOC2 THO complex 2
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1
TM7SF2 transmembrane 7 superfamily member 2
TM9SF4 transmembrane 9 superfamily protein member 4
TMEM43 transmembrane protein 43
TOP1 topoisomerase (DNA) I
TRMT10C tRNA methyltransferase 10 homolog C (S. cerevisiae)
UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae)
WDR5 WD repeat domain 5
XPC xeroderma pigmentosum, complementation group C
YARS2 tyrosyl-tRNA synthetase 2, mitochondrial

Symbol Name
AKR1E2 aldo-keto reductase family 1, member E2
ALDH1B1 aldehyde dehydrogenase 1 family, member B1
ANKZF1 ankyrin repeat and zinc finger domain containing 1
ARIH2 ariadne RBR E3 ubiquitin protein ligase 2
ASCL1 achaete-scute family bHLH transcription factor 1
BRCA2 breast cancer 2, early onset
CAMKMT calmodulin-lysine N-methyltransferase
CCDC124 coiled-coil domain containing 124
CCDC86 coiled-coil domain containing 86
CD44 CD44 molecule (Indian blood group)
CDK5RAP3 CDK5 regulatory subunit associated protein 3
CDYL chromodomain protein, Y-like
CIAO1 cytosolic iron-sulfur assembly component 1
COPS7B COP9 signalosome subunit 7B
DCTN4 dynactin 4 (p62)
DDRGK1 DDRGK domain containing 1
DGCR8 DGCR8 microprocessor complex subunit
DGKE diacylglycerol kinase, epsilon 64kDa
DNM1P26 dynamin 1 pseudogene 26
DTYMK deoxythymidylate kinase (thymidylate kinase)
ECT2 epithelial cell transforming 2
ELMO2 engulfment and cell motility 2
FANCA Fanconi anemia, complementation group A
FZD7 frizzled class receptor 7
GAK cyclin G associated kinase
GK glycerol kinase
GMPPA GDP-mannose pyrophosphorylase A
GUK1 guanylate kinase 1
HMBS hydroxymethylbilane synthase
IGBP1 immunoglobulin (CD79A) binding protein 1
IMPACT impact RWD domain protein
INTS5 integrator complex subunit 5
KAT8 K(lysine) acetyltransferase 8
KDM4E lysine (K)-specific demethylase 4E
KMT2B lysine (K)-specific methyltransferase 2B
KRBA1 KRAB-A domain containing 1
LDLR low density lipoprotein receptor
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein
LRRC8D leucine rich repeat containing 8 family, member D
MBD2 methyl-CpG binding domain protein 2
MCFD2 multiple coagulation factor deficiency 2
METAP2 methionyl aminopeptidase 2
MOB2 MOB kinase activator 2
MREG melanoregulin
MTFR2 mitochondrial fission regulator 2
MYO5A myosin VA (heavy chain 12, myoxin)
NACC1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
NEK7 NIMA-related kinase 7
NFKBIB nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
PARD3 par-3 family cell polarity regulator
PHYH phytanoyl-CoA 2-hydroxylase
PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1
PLCD3 phospholipase C, delta 3
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A
PRKRIP1 PRKR interacting protein 1 (IL11 inducible)
PTPRJ protein tyrosine phosphatase, receptor type, J
RAD23A RAD23 homolog A (S. cerevisiae)
RAVER1 ribonucleoprotein, PTB-binding 1
RFT1 RFT1 homolog (S. cerevisiae)
RNF103 ring finger protein 103
RNF181 ring finger protein 181
RPAP1 RNA polymerase II associated protein 1
RPP14 ribonuclease P/MRP 14kDa subunit
RPS19BP1 ribosomal protein S19 binding protein 1
RSRC1 arginine/serine-rich coiled-coil 1
SATB2 SATB homeobox 2
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SFXN2 sideroflexin 2
SLC20A1 solute carrier family 20 (phosphate transporter), member 1
SNX18 sorting nexin 18
STAG1 stromal antigen 1
STX17 syntaxin 17
STX8 syntaxin 8
SYAP1 synapse associated protein 1
SYNPO2 synaptopodin 2
TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3
THBD thrombomodulin
TIMM21 translocase of inner mitochondrial membrane 21 homolog (yeast)
TMEM259 transmembrane protein 259
TMX1 thioredoxin-related transmembrane protein 1
TPRKB TP53RK binding protein
TRABD TraB domain containing
TRIP10 thyroid hormone receptor interactor 10
TRMT2A tRNA methyltransferase 2 homolog A (S. cerevisiae)
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
TSSC4 tumor suppressing subtransferable candidate 4
TUB tubby bipartite transcription factor
TXNL1 thioredoxin-like 1
UBA5 ubiquitin-like modifier activating enzyme 5
UBE2H ubiquitin-conjugating enzyme E2H
WDR13 WD repeat domain 13
YEATS4 YEATS domain containing 4
ZC3HAV1 zinc finger CCCH-type, antiviral 1
ZNF281 zinc finger protein 281
ZNF598 zinc finger protein 598