RMC-6236_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description RMC-6236 perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the RMC-6236_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.240501
TRIO trio Rho guanine nucleotide exchange factor 0.0994471
MAP1B microtubule-associated protein 1B 0.0966353
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.089745
DST dystonin 0.088527
HDAC9 histone deacetylase 9 0.0863408
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0854679
AHNAK2 AHNAK nucleoprotein 2 0.0814113
AHNAK AHNAK nucleoprotein 0.0719053
COL5A1 collagen, type V, alpha 1 0.0682343
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0680069
FTH1 ferritin, heavy polypeptide 1 0.062873
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0614028
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0599215
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0598031
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0579544
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0514488
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0497601
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0496076
CALR calreticulin 0.0470643
HSPB1 heat shock 27kDa protein 1 0.0452739
DSPP dentin sialophosphoprotein 0.0435254
SAMD9 sterile alpha motif domain containing 9 0.042099
L1CAM L1 cell adhesion molecule 0.0418692
ENO1 enolase 1, (alpha) 0.0413628
TPM4 tropomyosin 4 0.0412421
EZR ezrin 0.0410512
CANX calnexin 0.0404861
TPM3 tropomyosin 3 0.0401084
CSTB cystatin B (stefin B) 0.039565
TMSB4X thymosin beta 4, X-linked 0.0386022
FLNA filamin A, alpha 0.037735
RHOA ras homolog family member A 0.0371518
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0366905
FN1 fibronectin 1 0.0349242
LDHA lactate dehydrogenase A 0.0345171
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0339669
SFTPA2 surfactant protein A2 0.0337038
EGFR epidermal growth factor receptor 0.0334489
NFE2L1 nuclear factor, erythroid 2-like 1 0.0333034
EEF2 eukaryotic translation elongation factor 2 0.0321037
POTEF POTE ankyrin domain family, member F 0.031923
MSN moesin 0.0317684
SORBS2 sorbin and SH3 domain containing 2 0.0316793
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0310738
MYH9 myosin, heavy chain 9, non-muscle 0.0309468
DCLK2 doublecortin-like kinase 2 0.0306354
LMNA lamin A/C 0.03002
PEA15 phosphoprotein enriched in astrocytes 15 0.0299539
ALCAM activated leukocyte cell adhesion molecule 0.0298641
FSTL1 follistatin-like 1 0.0293745
ANXA1 annexin A1 0.0289369
MBNL2 muscleblind-like splicing regulator 2 0.0284919
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0273689
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.0273422
S100A11 S100 calcium binding protein A11 0.0267944
ANKRD30B ankyrin repeat domain 30B 0.0266048
RNF213 ring finger protein 213 0.0263588
SP100 SP100 nuclear antigen 0.0262448
PLXNA2 plexin A2 0.0258922
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0257142
ZMIZ1 zinc finger, MIZ-type containing 1 0.025547
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0254178
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0247703
ABI3BP ABI family, member 3 (NESH) binding protein 0.0243354
PCDH7 protocadherin 7 0.0242096
LIMCH1 LIM and calponin homology domains 1 0.0235739
ARID5B AT rich interactive domain 5B (MRF1-like) 0.023383
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0232538
CDH13 cadherin 13 0.0229922
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0228779
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0226059
SET SET nuclear proto-oncogene 0.0224331
MACF1 microtubule-actin crosslinking factor 1 0.0219805
CLIC3 chloride intracellular channel 3 0.0215158
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0212076
RND3 Rho family GTPase 3 0.0208374
TPI1 triosephosphate isomerase 1 0.0208128
B2M beta-2-microglobulin 0.020682
RHOB ras homolog family member B 0.0205527
TENM3 teneurin transmembrane protein 3 0.0205091
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0199738
CENPF centromere protein F, 350/400kDa 0.019927
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0197988
TIMP3 TIMP metallopeptidase inhibitor 3 0.0196546
SPDL1 spindle apparatus coiled-coil protein 1 0.0193985
PRRC2C proline-rich coiled-coil 2C 0.0191832
CLIP1 CAP-GLY domain containing linker protein 1 0.0187835
SLFN5 schlafen family member 5 0.0187585
TRABD2B TraB domain containing 2B 0.0185524
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0184507
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0182707
NUCB2 nucleobindin 2 0.0180418
RPS2 ribosomal protein S2 0.0179069
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0175902
FMN2 formin 2 0.0173394
IFI6 interferon, alpha-inducible protein 6 0.0171534
KLF6 Kruppel-like factor 6 0.0170182
RASAL2 RAS protein activator like 2 0.0169994
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0168796

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.234012
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.175564
LOX lysyl oxidase -0.168494
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.107693
MT2A metallothionein 2A -0.105568
TMSB10 thymosin beta 10 -0.0860054
PLAT plasminogen activator, tissue -0.085831
FNDC3B fibronectin type III domain containing 3B -0.0858308
FBN1 fibrillin 1 -0.0840911
UBC ubiquitin C -0.0801194
DLG1 discs, large homolog 1 (Drosophila) -0.0725755
CD99 CD99 molecule -0.0689026
LOXL2 lysyl oxidase-like 2 -0.067329
COL8A1 collagen, type VIII, alpha 1 -0.0646002
STC1 stanniocalcin 1 -0.0627491
SOD2 superoxide dismutase 2, mitochondrial -0.0613205
PSD3 pleckstrin and Sec7 domain containing 3 -0.0612444
COL1A2 collagen, type I, alpha 2 -0.0574136
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0572564
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0555659
OGA O-GlcNAcase -0.0521267
SBF2 SET binding factor 2 -0.0518082
HIP1 huntingtin interacting protein 1 -0.0496655
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0495802
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0485951
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0471601
THBS2 thrombospondin 2 -0.0467084
COL5A2 collagen, type V, alpha 2 -0.0459326
VIM vimentin -0.0458794
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0458034
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.045659
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0453339
HLA-B major histocompatibility complex, class I, B -0.0438816
GPC6 glypican 6 -0.043725
WWTR1 WW domain containing transcription regulator 1 -0.0423381
GLIS3 GLIS family zinc finger 3 -0.0413375
ATP13A3 ATPase type 13A3 -0.0411371
RAB1A RAB1A, member RAS oncogene family -0.0402909
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0397396
RTN4 reticulon 4 -0.0392836
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0383494
COL3A1 collagen, type III, alpha 1 -0.0368015
ZEB1 zinc finger E-box binding homeobox 1 -0.0367991
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0365885
NF1 neurofibromin 1 -0.0356979
EPAS1 endothelial PAS domain protein 1 -0.0355489
ANKRD10 ankyrin repeat domain 10 -0.0353672
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0347084
NDRG1 N-myc downstream regulated 1 -0.0346454
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0345434
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0344915
PXDN peroxidasin -0.0344804
TTC3 tetratricopeptide repeat domain 3 -0.0341399
ELL2 elongation factor, RNA polymerase II, 2 -0.033862
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0337635
ZNF207 zinc finger protein 207 -0.0326717
CCND1 cyclin D1 -0.0323163
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0322634
AUTS2 autism susceptibility candidate 2 -0.0320721
MT1X metallothionein 1X -0.0318135
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0318085
TM4SF1 transmembrane 4 L six family member 1 -0.0316907
FRMD5 FERM domain containing 5 -0.0313464
TNIP1 TNFAIP3 interacting protein 1 -0.0312041
ARL4C ADP-ribosylation factor-like 4C -0.0311649
FRMD4A FERM domain containing 4A -0.0310558
JAZF1 JAZF zinc finger 1 -0.0304555
TMOD1 tropomodulin 1 -0.0303992
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0302286
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0299323
GNAS GNAS complex locus -0.0297551
COG5 component of oligomeric golgi complex 5 -0.0297486
LOC112694756 uncharaterized LOC112694756 -0.0296041
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0293386
MARCKS myristoylated alanine-rich protein kinase C substrate -0.029052
SEC31A SEC31 homolog A (S. cerevisiae) -0.0288344
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0288328
RUNX1 runt-related transcription factor 1 -0.0288104
MARCHF6 membrane associated ring-CH-type finger 6 -0.028677
HLA-E major histocompatibility complex, class I, E -0.0285191
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0282306
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0282256
HDLBP high density lipoprotein binding protein -0.028111
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0279533
NAV2 neuron navigator 2 -0.0279252
TPST1 tyrosylprotein sulfotransferase 1 -0.0274924
ANXA2 annexin A2 -0.0270564
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0263964
GOLGA4 golgin A4 -0.0263658
GLG1 golgi glycoprotein 1 -0.0263423
DENND5A DENN/MADD domain containing 5A -0.0263116
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0262252
LRRC49 leucine rich repeat containing 49 -0.0258114
WTAP Wilms tumor 1 associated protein -0.0257421
AVL9 AVL9 homolog (S. cerevisiase) -0.0255174
ESYT2 extended synaptotagmin-like protein 2 -0.0253752
NGLY1 N-glycanase 1 -0.0253641
FNIP1 folliculin interacting protein 1 -0.0250801
NPEPPS aminopeptidase puromycin sensitive -0.0247435
TPT1 tumor protein, translationally-controlled 1 -0.0247182