RMC-6236_A549 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description RMC-6236 perturbation in A549 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the RMC-6236_A549 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.27423
AKAP12 A kinase (PRKA) anchor protein 12 0.192293
VIM vimentin 0.133654
IGFBP3 insulin-like growth factor binding protein 3 0.101492
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0892367
ALCAM activated leukocyte cell adhesion molecule 0.0635925
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0604305
EEF2 eukaryotic translation elongation factor 2 0.0561907
EXT1 exostosin glycosyltransferase 1 0.0529942
RPS2 ribosomal protein S2 0.05084
TXNRD1 thioredoxin reductase 1 0.0498717
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0496448
DSTN destrin (actin depolymerizing factor) 0.0483161
B2M beta-2-microglobulin 0.0480541
KYNU kynureninase 0.047673
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0449094
RNF213 ring finger protein 213 0.044849
PALLD palladin, cytoskeletal associated protein 0.0431953
LDHA lactate dehydrogenase A 0.0411065
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0394476
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0383702
ZSWIM6 zinc finger, SWIM-type containing 6 0.0378417
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0376298
RACK1 receptor for activated C kinase 1 0.0358636
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0358606
TCIM transcriptional and immune response regulator 0.0355811
PCBP2 poly(rC) binding protein 2 0.0355502
EIF1 eukaryotic translation initiation factor 1 0.0355415
CA12 carbonic anhydrase XII 0.0352165
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0351737
NFE2L2 nuclear factor, erythroid 2-like 2 0.0344963
BICC1 BicC family RNA binding protein 1 0.0342355
LOC102724023 ES1 protein homolog, mitochondrial 0.0341414
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0331453
RPS17 ribosomal protein S17 0.0322351
RPS3 ribosomal protein S3 0.0317956
RPL26 ribosomal protein L26 0.0316659
RPS12 ribosomal protein S12 0.0311288
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0307733
MYADM myeloid-associated differentiation marker 0.0282089
PDLIM5 PDZ and LIM domain 5 0.0276658
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0276068
RPL12 ribosomal protein L12 0.0273827
DST dystonin 0.0269023
MYOF myoferlin 0.0268321
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0267528
CP ceruloplasmin (ferroxidase) 0.0266288
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0264557
AHNAK2 AHNAK nucleoprotein 2 0.0251736
SFTPA2 surfactant protein A2 0.0247259
SP100 SP100 nuclear antigen 0.0244507
MYH9 myosin, heavy chain 9, non-muscle 0.0241805
SRRM2 serine/arginine repetitive matrix 2 0.0238621
TNS3 tensin 3 0.0230231
AKR1C3 aldo-keto reductase family 1, member C3 0.0229545
IFI6 interferon, alpha-inducible protein 6 0.0227924
RBPMS RNA binding protein with multiple splicing 0.0227017
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0226392
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0221938
CXCL5 chemokine (C-X-C motif) ligand 5 0.022014
LMO7 LIM domain 7 0.0220111
ZBTB20 zinc finger and BTB domain containing 20 0.0220051
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0218396
ATF3 activating transcription factor 3 0.0214023
POTEF POTE ankyrin domain family, member F 0.0208462
RHCG Rh family, C glycoprotein 0.020771
RPL37A ribosomal protein L37a 0.0203864
RPS8 ribosomal protein S8 0.020349
DSPP dentin sialophosphoprotein 0.0203409
LIMCH1 LIM and calponin homology domains 1 0.0199592
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.019596
AKAP13 A kinase (PRKA) anchor protein 13 0.0194779
MBNL1 muscleblind-like splicing regulator 1 0.0191853
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0191513
MAP7 microtubule-associated protein 7 0.0190799
RPS19 ribosomal protein S19 0.018947
DUSP16 dual specificity phosphatase 16 0.0188029
RPS7 ribosomal protein S7 0.0187204
ATF4 activating transcription factor 4 0.0180926
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0179945
SET SET nuclear proto-oncogene 0.0179113
KRT7 keratin 7, type II 0.0178174
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0178129
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0178077
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0177022
CA8 carbonic anhydrase VIII 0.0175932
ETNK1 ethanolamine kinase 1 0.0174663
AKR1C2 aldo-keto reductase family 1, member C2 0.0173927
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0173043
LPP LIM domain containing preferred translocation partner in lipoma 0.0171604
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0170882
ZFP36L1 ZFP36 ring finger protein-like 1 0.0170872
FAT1 FAT atypical cadherin 1 0.017074
MYO10 myosin X 0.0168384
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0168304
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0168177
ARHGAP42 Rho GTPase activating protein 42 0.0167814
TPI1 triosephosphate isomerase 1 0.0166224
HDGF hepatoma-derived growth factor 0.016581
OPTN optineurin 0.0162293

decreased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.122027
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.120385
GRB10 growth factor receptor-bound protein 10 -0.081975
USP3 ubiquitin specific peptidase 3 -0.0774841
SPAG9 sperm associated antigen 9 -0.0740051
HELZ helicase with zinc finger -0.0634147
FNDC3B fibronectin type III domain containing 3B -0.0614825
EFNA5 ephrin-A5 -0.0610231
ASPH aspartate beta-hydroxylase -0.0560535
FLNB filamin B, beta -0.0548498
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.054699
PDE10A phosphodiesterase 10A -0.0546498
FMNL2 formin-like 2 -0.0541471
PTPRJ protein tyrosine phosphatase, receptor type, J -0.053166
NDRG1 N-myc downstream regulated 1 -0.0530181
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0523318
ANKRD11 ankyrin repeat domain 11 -0.0519007
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0514881
IGFBP4 insulin-like growth factor binding protein 4 -0.0479821
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0469091
KCTD9 potassium channel tetramerization domain containing 9 -0.0457186
MAML3 mastermind-like 3 (Drosophila) -0.0437237
NAMPT nicotinamide phosphoribosyltransferase -0.0437125
THSD4 thrombospondin, type I, domain containing 4 -0.0419182
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0417319
PDE4D phosphodiesterase 4D, cAMP-specific -0.0402153
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0402029
RTN4 reticulon 4 -0.0393632
ARHGAP26 Rho GTPase activating protein 26 -0.0393455
MCL1 myeloid cell leukemia 1 -0.0392331
GOLGA4 golgin A4 -0.038101
PTK2 protein tyrosine kinase 2 -0.037717
BIRC6 baculoviral IAP repeat containing 6 -0.0374919
USP34 ubiquitin specific peptidase 34 -0.0374455
MT1X metallothionein 1X -0.0373756
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0372327
ECT2 epithelial cell transforming 2 -0.0371751
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0368223
VEZT vezatin, adherens junctions transmembrane protein -0.0363716
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0361066
RIN2 Ras and Rab interactor 2 -0.0360886
KDM3A lysine (K)-specific demethylase 3A -0.0357652
ANXA2 annexin A2 -0.0353551
DGKD diacylglycerol kinase, delta 130kDa -0.0352903
STC1 stanniocalcin 1 -0.0352292
PTMA prothymosin, alpha -0.0348333
MT2A metallothionein 2A -0.0343789
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0340562
PARD3 par-3 family cell polarity regulator -0.0335809
RAB1A RAB1A, member RAS oncogene family -0.0331137
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0324157
ADAM17 ADAM metallopeptidase domain 17 -0.0322669
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0320261
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0319308
OGA O-GlcNAcase -0.031615
NBAS neuroblastoma amplified sequence -0.0315381
TM9SF3 transmembrane 9 superfamily member 3 -0.0310666
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0308711
MCTP1 multiple C2 domains, transmembrane 1 -0.0305079
SETD5 SET domain containing 5 -0.0303789
FGD6 FYVE, RhoGEF and PH domain containing 6 -0.0301147
WDR45B WD repeat domain 45B -0.0300409
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0294669
MARCHF6 membrane associated ring-CH-type finger 6 -0.0294126
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0292427
FBXO11 F-box protein 11 -0.0291559
NPEPPS aminopeptidase puromycin sensitive -0.0290843
AUTS2 autism susceptibility candidate 2 -0.02901
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0289936
PDE8A phosphodiesterase 8A -0.0289736
WAC WW domain containing adaptor with coiled-coil -0.0288708
DENND4C DENN/MADD domain containing 4C -0.0286598
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0284706
NUP58 nucleoporin 58 -0.0280255
ABTB3 ankyrin repeat and BTB domain containing 3 -0.0276589
KCMF1 potassium channel modulatory factor 1 -0.027625
SLC38A2 solute carrier family 38, member 2 -0.0276027
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.027471
PRKCA protein kinase C, alpha -0.0274363
NAV2 neuron navigator 2 -0.0274168
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0272348
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0266981
NF1 neurofibromin 1 -0.0266799
SBF2 SET binding factor 2 -0.0264827
SRP54 signal recognition particle 54kDa -0.0263762
CEP95 centrosomal protein 95kDa -0.0263262
TBC1D22A TBC1 domain family, member 22A -0.0261616
EGR1 early growth response 1 -0.0259669
PUM2 pumilio RNA-binding family member 2 -0.0258107
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0257078
ARL5B ADP-ribosylation factor-like 5B -0.0256261
ATP13A3 ATPase type 13A3 -0.0253359
ZFAND3 zinc finger, AN1-type domain 3 -0.024962
RBM39 RNA binding motif protein 39 -0.024935
KMT2E lysine (K)-specific methyltransferase 2E -0.0249025
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0248764
ACBD3 acyl-CoA binding domain containing 3 -0.0248485
KMT2C lysine (K)-specific methyltransferase 2C -0.0248474
ZFAND6 zinc finger, AN1-type domain 6 -0.0247254
SUCO SUN domain containing ossification factor -0.0245815