RMC-6236_BT-474 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description RMC-6236 perturbation in BT-474 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the RMC-6236_BT-474 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.301675
RPL19 ribosomal protein L19 0.215213
RPL23 ribosomal protein L23 0.196727
ALCAM activated leukocyte cell adhesion molecule 0.145558
PTMA prothymosin, alpha 0.112347
DSPP dentin sialophosphoprotein 0.108472
TENM2 teneurin transmembrane protein 2 0.101519
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0999952
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0976527
LOC102724023 ES1 protein homolog, mitochondrial 0.0970128
DUSP16 dual specificity phosphatase 16 0.0826401
FBXL20 F-box and leucine-rich repeat protein 20 0.0753016
TRPS1 trichorhinophalangeal syndrome I 0.0726161
ENAH enabled homolog (Drosophila) 0.0716814
RPS3 ribosomal protein S3 0.071078
ERBB2 erb-b2 receptor tyrosine kinase 2 0.070807
SLFN5 schlafen family member 5 0.0691739
SET SET nuclear proto-oncogene 0.0685549
TMSB4X thymosin beta 4, X-linked 0.0669451
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 0.0659135
PRRC2C proline-rich coiled-coil 2C 0.065376
PTPRK protein tyrosine phosphatase, receptor type, K 0.0650434
B2M beta-2-microglobulin 0.0632193
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0623853
IFI6 interferon, alpha-inducible protein 6 0.0611275
SAMD12 sterile alpha motif domain containing 12 0.057968
SRRM2 serine/arginine repetitive matrix 2 0.0573156
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0552998
RPL12 ribosomal protein L12 0.053838
UNC13B unc-13 homolog B (C. elegans) 0.0537287
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0527053
CLTC clathrin, heavy chain (Hc) 0.0525763
ZBTB20 zinc finger and BTB domain containing 20 0.0519928
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0519427
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0501763
AHNAK AHNAK nucleoprotein 0.049983
ENO1 enolase 1, (alpha) 0.0490303
INSR insulin receptor 0.0489845
CATSPERB catsper channel auxiliary subunit beta 0.0484851
ANKRD12 ankyrin repeat domain 12 0.0484078
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0471504
SP100 SP100 nuclear antigen 0.0453366
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0449565
CANX calnexin 0.0442758
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0436366
VAV3 vav 3 guanine nucleotide exchange factor 0.0429865
LDHA lactate dehydrogenase A 0.0429116
NEBL nebulette 0.0428248
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0426925
RAD21 RAD21 homolog (S. pombe) 0.0423224
EEF2 eukaryotic translation elongation factor 2 0.0416061
BCAS3 breast carcinoma amplified sequence 3 0.0412115
PRLR prolactin receptor 0.0409329
CTNND1 catenin (cadherin-associated protein), delta 1 0.0408067
TC2N tandem C2 domains, nuclear 0.04018
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0392779
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0389999
PBX1 pre-B-cell leukemia homeobox 1 0.0386289
SERINC3 serine incorporator 3 0.0381394
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 0.0380516
CLIP1 CAP-GLY domain containing linker protein 1 0.0378416
KIF5B kinesin family member 5B 0.0376485
SLC38A1 solute carrier family 38, member 1 0.0373813
PAWR PRKC, apoptosis, WT1, regulator 0.0373386
BCAS1 breast carcinoma amplified sequence 1 0.0370847
CALR calreticulin 0.0366852
DSTN destrin (actin depolymerizing factor) 0.0364712
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.036261
TPM3 tropomyosin 3 0.035783
NIPBL Nipped-B homolog (Drosophila) 0.0357797
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0352132
CD164 CD164 molecule, sialomucin 0.0351448
GOLGB1 golgin B1 0.0349465
ADAR adenosine deaminase, RNA-specific 0.0349435
RARRES1 retinoic acid receptor responder (tazarotene induced) 1 0.0338695
PGM2L1 phosphoglucomutase 2-like 1 0.0336278
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0333229
ZHX2 zinc fingers and homeoboxes 2 0.0329269
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0327778
MLLT6 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 0.0324329
FNDC3A fibronectin type III domain containing 3A 0.0323584
PTPRF protein tyrosine phosphatase, receptor type, F 0.0323509
PFDN4 prefoldin subunit 4 0.0321305
CENPF centromere protein F, 350/400kDa 0.0320871
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0318275
RABGAP1 RAB GTPase activating protein 1 0.0315159
ZFP36L1 ZFP36 ring finger protein-like 1 0.0313477
SOX4 SRY (sex determining region Y)-box 4 0.0313418
YPEL2 yippee-like 2 (Drosophila) 0.0312874
PGK1 phosphoglycerate kinase 1 0.0308993
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0308091
MBNL2 muscleblind-like splicing regulator 2 0.0307442
RIMS2 regulating synaptic membrane exocytosis 2 0.0306877
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.030645
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0305284
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.0304185
RPS8 ribosomal protein S8 0.0303886
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0301752
HSPA8 heat shock 70kDa protein 8 0.0299415
CSDE1 cold shock domain containing E1, RNA-binding 0.0299404

decreased expression

Symbol Name Standardized Value
GRB10 growth factor receptor-bound protein 10 -0.0666932
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.059524
MCL1 myeloid cell leukemia 1 -0.0588769
NDRG1 N-myc downstream regulated 1 -0.0542833
SRCIN1 SRC kinase signaling inhibitor 1 -0.0471571
ASPH aspartate beta-hydroxylase -0.0452374
ACSS2 acyl-CoA synthetase short-chain family member 2 -0.0438217
VMP1 vacuole membrane protein 1 -0.0427081
THSD4 thrombospondin, type I, domain containing 4 -0.0412558
TSC22D2 TSC22 domain family, member 2 -0.0385448
MT2A metallothionein 2A -0.0366489
ACACA acetyl-CoA carboxylase alpha -0.0364592
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0348075
FASN fatty acid synthase -0.0342326
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0340353
EGR1 early growth response 1 -0.033368
AHCTF1 AT hook containing transcription factor 1 -0.0332827
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0330483
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0326373
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0323741
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0320597
NABP1 nucleic acid binding protein 1 -0.0304093
VIPR2 vasoactive intestinal peptide receptor 2 -0.0298923
PTK2 protein tyrosine kinase 2 -0.0292362
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.029205
ACTN4 actinin, alpha 4 -0.0285314
SMYD3 SET and MYND domain containing 3 -0.0279226
DENND1A DENN/MADD domain containing 1A -0.0277045
NIBAN2 niban apoptosis regulator 2 -0.02674
TMEM165 transmembrane protein 165 -0.025666
AZIN1 antizyme inhibitor 1 -0.0249857
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0249414
DST dystonin -0.0247884
VCL vinculin -0.0238941
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0237902
PARD3 par-3 family cell polarity regulator -0.0235619
TRA2B transformer 2 beta homolog (Drosophila) -0.0233965
FNDC3B fibronectin type III domain containing 3B -0.0231569
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0227245
GMDS GDP-mannose 4,6-dehydratase -0.0226955
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0226399
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0223576
DTNA dystrobrevin, alpha -0.0223218
RTN4 reticulon 4 -0.0220071
USP53 ubiquitin specific peptidase 53 -0.0219208
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0215155
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0214766
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0210178
CCNL1 cyclin L1 -0.0209784
S100A9 S100 calcium binding protein A9 -0.0207827
S100A14 S100 calcium binding protein A14 -0.0207478
ARHGAP26 Rho GTPase activating protein 26 -0.0205462
LDLR low density lipoprotein receptor -0.0204563
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit -0.0201178
ELL2 elongation factor, RNA polymerase II, 2 -0.0200499
POLD3 polymerase (DNA-directed), delta 3, accessory subunit -0.0199439
NCOA3 nuclear receptor coactivator 3 -0.0198046
ITGB6 integrin, beta 6 -0.0187984
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0186638
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0186154
PRELID2 PRELI domain containing 2 -0.0185723
ZFAND3 zinc finger, AN1-type domain 3 -0.0183537
TNS3 tensin 3 -0.0181571
FLNB filamin B, beta -0.0177751
STK17A serine/threonine kinase 17a -0.0177155
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0176001
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0175307
S100A8 S100 calcium binding protein A8 -0.0174518
SRPK2 SRSF protein kinase 2 -0.017431
TENM4 teneurin transmembrane protein 4 -0.0173125
CD44 CD44 molecule (Indian blood group) -0.0172666
SHB Src homology 2 domain containing adaptor protein B -0.0171995
GRB7 growth factor receptor-bound protein 7 -0.0171714
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0169392
ADAM9 ADAM metallopeptidase domain 9 -0.0169325
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit -0.0168952
TMEM41B transmembrane protein 41B -0.0168907
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0167794
SMAD3 SMAD family member 3 -0.0167577
ADNP activity-dependent neuroprotector homeobox -0.0164715
SLC22A23 solute carrier family 22, member 23 -0.0162411
MMP24OS MMP24 opposite strand -0.0162295
ATAD2 ATPase family, AAA domain containing 2 -0.0161647
RGS6 regulator of G-protein signaling 6 -0.0161317
NBAS neuroblastoma amplified sequence -0.0161129
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0158834
PDE4D phosphodiesterase 4D, cAMP-specific -0.015762
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 -0.0156072
AGO2 argonaute RISC catalytic component 2 -0.0155025
TPD52 tumor protein D52 -0.0153094
MXD1 MAX dimerization protein 1 -0.0152701
U2SURP U2 snRNP-associated SURP domain containing -0.0152203
RYK receptor-like tyrosine kinase -0.015157
E2F3 E2F transcription factor 3 -0.0150282
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0150278
ANXA5 annexin A5 -0.0146249
RYBP RING1 and YY1 binding protein -0.0146091
TRIM25 tripartite motif containing 25 -0.014571
FAM3C family with sequence similarity 3, member C -0.0145274
NPC1 Niemann-Pick disease, type C1 -0.0145098