RMC-6236_C-33 A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description RMC-6236 perturbation in C-33 A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the RMC-6236_C-33 A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.177987
COL5A2 collagen, type V, alpha 2 0.0989669
EEF2 eukaryotic translation elongation factor 2 0.0781418
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.07296
ZNF608 zinc finger protein 608 0.0698795
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0689971
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0582536
IFI6 interferon, alpha-inducible protein 6 0.0570186
SOX5 SRY (sex determining region Y)-box 5 0.0534546
SRRM2 serine/arginine repetitive matrix 2 0.0497376
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0489297
JUN jun proto-oncogene 0.0473207
DST dystonin 0.0465815
B2M beta-2-microglobulin 0.0451963
PCBP2 poly(rC) binding protein 2 0.0449061
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0438053
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0410641
ADGRG6 adhesion G protein-coupled receptor G6 0.0402242
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 0.0393607
RPS12 ribosomal protein S12 0.038995
JMJD1C jumonji domain containing 1C 0.037578
PCNX4 pecanex 4 0.0372164
ENO1 enolase 1, (alpha) 0.0358394
RHOA ras homolog family member A 0.0344864
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0340408
TOX thymocyte selection-associated high mobility group box 0.0335961
NBEAL1 neurobeachin-like 1 0.0330677
CADM2 cell adhesion molecule 2 0.0321312
SRRM1 serine/arginine repetitive matrix 1 0.0318038
PRRC2C proline-rich coiled-coil 2C 0.0316727
MAP1B microtubule-associated protein 1B 0.0308174
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0297508
RPS2 ribosomal protein S2 0.0294615
SON SON DNA binding protein 0.0293399
EIF1 eukaryotic translation initiation factor 1 0.0290128
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0284755
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0275534
RPS3 ribosomal protein S3 0.0275525
BRD2 bromodomain containing 2 0.0271101
SIK2 salt-inducible kinase 2 0.0268478
LOC102724023 ES1 protein homolog, mitochondrial 0.0265661
ISG15 ISG15 ubiquitin-like modifier 0.0264819
MATR3 matrin 3 0.0261651
ZBTB20 zinc finger and BTB domain containing 20 0.0256015
BNC2 basonuclin 2 0.0252886
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0249801
ANKRD12 ankyrin repeat domain 12 0.0249698
CEP112 centrosomal protein 112kDa 0.024853
RPL12 ribosomal protein L12 0.0243123
PABPN1 poly(A) binding protein, nuclear 1 0.0242724
SMC3 structural maintenance of chromosomes 3 0.023849
KTN1 kinectin 1 (kinesin receptor) 0.0236861
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0233776
RPS8 ribosomal protein S8 0.0229454
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta 0.0226725
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0223172
ADAR adenosine deaminase, RNA-specific 0.0223016
KMT2C lysine (K)-specific methyltransferase 2C 0.022259
OGA O-GlcNAcase 0.0221992
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0221663
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0219619
SYAP1 synapse associated protein 1 0.021327
BAZ2B bromodomain adjacent to zinc finger domain, 2B 0.0212402
TPI1 triosephosphate isomerase 1 0.0212237
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0210233
RACK1 receptor for activated C kinase 1 0.0210154
KLF6 Kruppel-like factor 6 0.0209276
ATF4 activating transcription factor 4 0.0209072
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0206281
H1-0 H1.0 linker histone 0.0206214
CEP350 centrosomal protein 350kDa 0.0205613
TPM3 tropomyosin 3 0.0205015
GPBP1 GC-rich promoter binding protein 1 0.0204892
NFIB nuclear factor I/B 0.0202191
SCARB2 scavenger receptor class B, member 2 0.0199796
FTH1 ferritin, heavy polypeptide 1 0.0199087
RSRC2 arginine/serine-rich coiled-coil 2 0.0198843
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.019801
RPS17 ribosomal protein S17 0.0197454
AKAP9 A kinase (PRKA) anchor protein 9 0.0196553
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.019416
SMC1A structural maintenance of chromosomes 1A 0.0192598
BCLAF1 BCL2-associated transcription factor 1 0.019189
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0191873
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0191365
USP47 ubiquitin specific peptidase 47 0.0190729
MLIP muscular LMNA-interacting protein 0.018924
GOLGB1 golgin B1 0.0189022
YBX1 Y box binding protein 1 0.0188072
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0187138
KIF5B kinesin family member 5B 0.0186281
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0186222
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0186074
ZFP36L1 ZFP36 ring finger protein-like 1 0.0182492
CCDC88A coiled-coil domain containing 88A 0.0182043
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0182017
APLP2 amyloid beta (A4) precursor-like protein 2 0.0181369
ARHGAP5 Rho GTPase activating protein 5 0.0181239
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.018046
CALD1 caldesmon 1 0.0180121

decreased expression

Symbol Name Standardized Value
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.127933
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.125655
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.114364
RAD51B RAD51 paralog B -0.111772
NPAS3 neuronal PAS domain protein 3 -0.110442
NEBL nebulette -0.0981273
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0945707
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0899228
SMYD3 SET and MYND domain containing 3 -0.078416
TENM3 teneurin transmembrane protein 3 -0.0740347
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0584959
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0579076
TAS2R14 taste receptor, type 2, member 14 -0.0565433
ATP11A ATPase, class VI, type 11A -0.0550035
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0536023
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0507466
ACTG1 actin gamma 1 -0.0495488
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0453677
FMNL2 formin-like 2 -0.0435957
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0430599
PRICKLE1 prickle homolog 1 (Drosophila) -0.0429237
DENND1A DENN/MADD domain containing 1A -0.0422346
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0405649
PTPRG protein tyrosine phosphatase, receptor type, G -0.0392818
TRIO trio Rho guanine nucleotide exchange factor -0.0392813
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0373413
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0368913
OSBPL10 oxysterol binding protein-like 10 -0.0360514
PDE4D phosphodiesterase 4D, cAMP-specific -0.0358285
ARHGAP32 Rho GTPase activating protein 32 -0.035449
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0335026
KPNB1 karyopherin (importin) beta 1 -0.0334833
ZFAND3 zinc finger, AN1-type domain 3 -0.0333559
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.032612
TTC28 tetratricopeptide repeat domain 28 -0.0316148
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 -0.031144
MDN1 MDN1, midasin homolog (yeast) -0.0303199
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0302405
R3HDM1 R3H domain containing 1 -0.0294412
BIRC6 baculoviral IAP repeat containing 6 -0.0292564
RAP1B RAP1B, member of RAS oncogene family -0.0287875
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0287689
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0287324
AFG2A AFG2 AAA ATPase homolog A -0.0284887
IARS1 isoleucyl-tRNA synthetase 1 -0.0283821
SLF1 SMC5-SMC6 complex localization factor 1 -0.0283675
RPS21 ribosomal protein S21 -0.0279615
SRPK1 SRSF protein kinase 1 -0.0279088
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.027684
SRPK2 SRSF protein kinase 2 -0.027069
RABGAP1L RAB GTPase activating protein 1-like -0.0268835
TBC1D22A TBC1 domain family, member 22A -0.0267174
NF1 neurofibromin 1 -0.0264669
TXNRD1 thioredoxin reductase 1 -0.026447
LIMS1 LIM and senescent cell antigen-like domains 1 -0.026136
ACACA acetyl-CoA carboxylase alpha -0.0259572
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0258278
HMGA1 high mobility group AT-hook 1 -0.0257219
RPS24 ribosomal protein S24 -0.0250396
EPN2 epsin 2 -0.0248871
KIAA1958 KIAA1958 -0.0245276
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0240295
RPL38 ribosomal protein L38 -0.0238901
PIAS2 protein inhibitor of activated STAT, 2 -0.0235087
ZNF217 zinc finger protein 217 -0.0231872
EGR1 early growth response 1 -0.0231201
NXN nucleoredoxin -0.0231153
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0230645
GSE1 Gse1 coiled-coil protein -0.0227741
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0226184
TMEM41B transmembrane protein 41B -0.0225575
ATRN attractin -0.0225402
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0225146
CAMTA1 calmodulin binding transcription activator 1 -0.022368
ABI2 abl-interactor 2 -0.022321
TASOR2 transcription activation suppressor family member 2 -0.0223011
TMEM123 transmembrane protein 123 -0.0222526
KCMF1 potassium channel modulatory factor 1 -0.0221134
PUM2 pumilio RNA-binding family member 2 -0.0218952
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) -0.0218335
TPD52 tumor protein D52 -0.0218263
XPO7 exportin 7 -0.0217895
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0216113
RFX7 regulatory factor X, 7 -0.0215876
TRAF3 TNF receptor-associated factor 3 -0.0212764
CHSY1 chondroitin sulfate synthase 1 -0.0212249
RPL27A ribosomal protein L27a -0.0211868
DIDO1 death inducer-obliterator 1 -0.0207726
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0207663
EMP1 epithelial membrane protein 1 -0.0207561
ADNP activity-dependent neuroprotector homeobox -0.0207272
TBC1D32 TBC1 domain family, member 32 -0.0206307
MAP4 microtubule-associated protein 4 -0.020629
PTK2 protein tyrosine kinase 2 -0.0206072
WDPCP WD repeat containing planar cell polarity effector -0.0205636
BLTP2 bridge-like lipid transfer protein family member 2 -0.0205456
RPS11 ribosomal protein S11 -0.0205041
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit -0.0204401
FNDC3B fibronectin type III domain containing 3B -0.0202489
GMDS GDP-mannose 4,6-dehydratase -0.0201727